RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 COG3Q96JB2 828 aa15.78■□□□□ 0.12
PTPN7-204ENST00000462815 ZNF784Q8NCA9 323 aaPredicted RBP15.77■□□□□ 0.12
PTPN7-204ENST00000462815 DDX54Q8TDD1 881 aaKnown RBP15.77■□□□□ 0.12
PTPN7-204ENST00000462815 FYB1O15117 783 aa15.76■□□□□ 0.11
PTPN7-204ENST00000462815 PRIM1P49642 420 aaKnown RBP15.76■□□□□ 0.11
PTPN7-204ENST00000462815 KCNQ4P56696 695 aa15.76■□□□□ 0.11
PTPN7-204ENST00000462815 NBPF6Q5VWK0 638 aa15.76■□□□□ 0.11
PTPN7-204ENST00000462815 NBPF4Q96M43 638 aa15.76■□□□□ 0.11
PTPN7-204ENST00000462815 CHD4Q14839 1912 aa15.76■□□□□ 0.11
PTPN7-204ENST00000462815 KIF20BQ96Q89 1820 aa15.75■□□□□ 0.11
PTPN7-204ENST00000462815 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
PTPN7-204ENST00000462815 RRS1Q15050 365 aaKnown RBP15.74■□□□□ 0.11
PTPN7-204ENST00000462815 ZCRB1Q8TBF4 217 aaKnown RBP15.74■□□□□ 0.11
PTPN7-204ENST00000462815 SLC16A10Q8TF71 515 aa15.74■□□□□ 0.11
PTPN7-204ENST00000462815 AMPHP49418 695 aa15.73■□□□□ 0.11
PTPN7-204ENST00000462815 NCAPD2Q15021 1401 aa15.73■□□□□ 0.11
PTPN7-204ENST00000462815 ANKRD26Q9UPS8 1709 aa15.73■□□□□ 0.11
PTPN7-204ENST00000462815 USP47Q96K76 1375 aa15.73■□□□□ 0.11
PTPN7-204ENST00000462815 GGNBP2Q9H3C7 697 aa15.72■□□□□ 0.11
PTPN7-204ENST00000462815 C5P01031 1676 aa15.72■□□□□ 0.11
PTPN7-204ENST00000462815 INSRP06213 1382 aa15.72■□□□□ 0.11
PTPN7-204ENST00000462815 PKD1L3Q7Z443 1732 aa15.71■□□□□ 0.11
PTPN7-204ENST00000462815 SLC24A1O60721 1099 aa15.71■□□□□ 0.11
PTPN7-204ENST00000462815 USHBP1Q8N6Y0 703 aa15.71■□□□□ 0.11
PTPN7-204ENST00000462815 CGNL1Q0VF96 1302 aa15.7■□□□□ 0.1
PTPN7-204ENST00000462815 SYTL4Q96C24 671 aaPredicted RBP15.7■□□□□ 0.1
PTPN7-204ENST00000462815 KIF24Q5T7B8 1368 aa15.7■□□□□ 0.1
PTPN7-204ENST00000462815 TAF1LQ8IZX4 1826 aa15.7■□□□□ 0.1
PTPN7-204ENST00000462815 HSP90AB2PQ58FF8 381 aa15.69■□□□□ 0.1
PTPN7-204ENST00000462815 NLGN2Q8NFZ4 835 aa15.69■□□□□ 0.1
PTPN7-204ENST00000462815 FLT4P35916 1363 aa15.69■□□□□ 0.1
PTPN7-204ENST00000462815 CEP350Q5VT06 3117 aa15.69■□□□□ 0.1
PTPN7-204ENST00000462815 TMF1P82094 1093 aa15.68■□□□□ 0.1
PTPN7-204ENST00000462815 CARD14Q9BXL6 1004 aa15.68■□□□□ 0.1
PTPN7-204ENST00000462815 TFCP2L1Q9NZI6 479 aa15.68■□□□□ 0.1
PTPN7-204ENST00000462815 CCNL1Q9UK58 526 aaPredicted RBP15.68■□□□□ 0.1
PTPN7-204ENST00000462815 SMG6Q86US8 1419 aaKnown RBP15.68■□□□□ 0.1
PTPN7-204ENST00000462815 COL23A1Q86Y22 540 aaPredicted RBP15.67■□□□□ 0.1
PTPN7-204ENST00000462815 ITGB4P16144 1822 aa15.66■□□□□ 0.1
PTPN7-204ENST00000462815 CYP27B1O15528 508 aa15.66■□□□□ 0.1
PTPN7-204ENST00000462815 MAP2P11137 1827 aaKnown RBP15.66■□□□□ 0.1
PTPN7-204ENST00000462815 POLD1P28340 1107 aa15.65■□□□□ 0.1
PTPN7-204ENST00000462815 NSD3Q9BZ95 1437 aa15.65■□□□□ 0.1
PTPN7-204ENST00000462815 C4BP0C0L5 1744 aa15.65■□□□□ 0.1
PTPN7-204ENST00000462815 PCDH11XQ9BZA7 1347 aa15.65■□□□□ 0.1
PTPN7-204ENST00000462815 PCDH11YQ9BZA8 1340 aa15.65■□□□□ 0.1
PTPN7-204ENST00000462815 AMIGO3Q86WK7 504 aa15.64■□□□□ 0.09
PTPN7-204ENST00000462815 RAPGEF4Q8WZA2 1011 aa15.64■□□□□ 0.09
PTPN7-204ENST00000462815 EMILIN1Q9Y6C2 1016 aa15.64■□□□□ 0.09
PTPN7-204ENST00000462815 PALLDQ8WX93 1383 aa15.63■□□□□ 0.09
PTPN7-204ENST00000462815 YBX3P16989 372 aaKnown RBP eCLIP15.63■□□□□ 0.093e-6■□□□□ 10.7
PTPN7-204ENST00000462815 TATP17735 454 aaPredicted RBP15.63■□□□□ 0.09
PTPN7-204ENST00000462815 UBR3Q6ZT12 1888 aa15.63■□□□□ 0.09
PTPN7-204ENST00000462815 GPR162Q16538 588 aa15.62■□□□□ 0.09
PTPN7-204ENST00000462815 C1QTNF8P60827 252 aa15.61■□□□□ 0.09
PTPN7-204ENST00000462815 NKX1-1Q15270 411 aaPredicted RBP15.61■□□□□ 0.09
PTPN7-204ENST00000462815 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
PTPN7-204ENST00000462815 CDCA8Q53HL2 280 aa15.59■□□□□ 0.09
PTPN7-204ENST00000462815 MSL1Q68DK7 614 aa15.59■□□□□ 0.09
PTPN7-204ENST00000462815 WASHC2AQ641Q2 1341 aa15.59■□□□□ 0.09
PTPN7-204ENST00000462815 SENP3-EIF4A1A0A087X0R7 540 aa15.58■□□□□ 0.08
PTPN7-204ENST00000462815 MPRIPQ6WCQ1 1025 aa15.58■□□□□ 0.08
PTPN7-204ENST00000462815 PELP1Q8IZL8 1130 aaKnown RBP15.58■□□□□ 0.08
PTPN7-204ENST00000462815 PIGBQ92521 554 aa15.58■□□□□ 0.08
PTPN7-204ENST00000462815 SMIM5Q71RC9 77 aa15.56■□□□□ 0.08
PTPN7-204ENST00000462815 EYA1Q99502 592 aa15.56■□□□□ 0.08
PTPN7-204ENST00000462815 ADCY9O60503 1353 aa15.55■□□□□ 0.08
PTPN7-204ENST00000462815 PLEKHG2Q9H7P9 1386 aa15.55■□□□□ 0.08
PTPN7-204ENST00000462815 MSH5O43196 834 aa15.55■□□□□ 0.08
PTPN7-204ENST00000462815 POLKQ9UBT6 870 aa15.55■□□□□ 0.08
PTPN7-204ENST00000462815 CD2APQ9Y5K6 639 aa15.55■□□□□ 0.08
PTPN7-204ENST00000462815 KIAA1551Q9HCM1 1747 aa15.54■□□□□ 0.08
PTPN7-204ENST00000462815 ZNF831Q5JPB2 1677 aa15.54■□□□□ 0.08
PTPN7-204ENST00000462815 KDRP35968 1356 aa15.54■□□□□ 0.08
PTPN7-204ENST00000462815 TRIM26Q12899 539 aaPredicted RBP15.54■□□□□ 0.08
PTPN7-204ENST00000462815 LINC00116Q8NCU8 138 aa15.54■□□□□ 0.08
PTPN7-204ENST00000462815 FLAD1Q8NFF5 587 aa15.54■□□□□ 0.08
PTPN7-204ENST00000462815 SMARCC1Q92922 1105 aaPredicted RBP15.54■□□□□ 0.08
PTPN7-204ENST00000462815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.54■□□□□ 0.08
PTPN7-204ENST00000462815 GRIN3BO60391 1043 aa15.53■□□□□ 0.08
PTPN7-204ENST00000462815 ITPK1Q13572 414 aa15.53■□□□□ 0.08
PTPN7-204ENST00000462815 LOC102724428A0A0B4J2F2 783 aa15.52■□□□□ 0.08
PTPN7-204ENST00000462815 PHKG2P15735 406 aa15.52■□□□□ 0.08
PTPN7-204ENST00000462815 SIK1P57059 783 aa15.52■□□□□ 0.08
PTPN7-204ENST00000462815 TIMELESSQ9UNS1 1208 aa15.52■□□□□ 0.08
PTPN7-204ENST00000462815 CICQ96RK0 1608 aaPredicted RBP15.52■□□□□ 0.08
PTPN7-204ENST00000462815 ATP10DQ9P241 1426 aa15.51■□□□□ 0.07
PTPN7-204ENST00000462815 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.51■□□□□ 0.07
PTPN7-204ENST00000462815 GIGYF1O75420 1035 aaPredicted RBP15.51■□□□□ 0.07
PTPN7-204ENST00000462815 SSFA2P28290 1259 aa15.51■□□□□ 0.07
PTPN7-204ENST00000462815 EIF4A2Q14240 407 aaKnown RBP15.51■□□□□ 0.07
PTPN7-204ENST00000462815 AK7Q96M32 723 aa15.51■□□□□ 0.07
PTPN7-204ENST00000462815 ASAP1Q9ULH1 1129 aa15.51■□□□□ 0.07
PTPN7-204ENST00000462815 SPG7Q9UQ90 795 aa15.51■□□□□ 0.07
PTPN7-204ENST00000462815 KIF13BQ9NQT8 1826 aa15.51■□□□□ 0.07
PTPN7-204ENST00000462815 COL5A3P25940 1745 aaPredicted RBP15.51■□□□□ 0.07
PTPN7-204ENST00000462815 IGSF1Q8N6C5 1336 aa15.5■□□□□ 0.07
PTPN7-204ENST00000462815 PPM1GO15355 546 aaPredicted RBP15.5■□□□□ 0.07
PTPN7-204ENST00000462815 HMGB2P26583 209 aaKnown RBP15.5■□□□□ 0.07
PTPN7-204ENST00000462815 PHF14O94880 888 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms