RNA–Protein interactions for RNA: ENST00000462773.6

HLA-J-201, Transcript of major histocompatibility complex, class I, J (pseudogene), humanhuman

BASIC

Gene HLA-J, Length 1,622 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-J-201ENST00000462773 PLSCR1O15162 318 aa23.84■■□□□ 1.41
HLA-J-201ENST00000462773 HSP90AB2PQ58FF8 381 aa23.84■■□□□ 1.41
HLA-J-201ENST00000462773 PPM1GO15355 546 aaPredicted RBP23.84■■□□□ 1.41
HLA-J-201ENST00000462773 R3HDM1Q15032 1099 aaKnown RBP23.84■■□□□ 1.41
HLA-J-201ENST00000462773 NBPF14Q5TI25 921 aa23.83■■□□□ 1.41
HLA-J-201ENST00000462773 EMILIN1Q9Y6C2 1016 aa23.83■■□□□ 1.41
HLA-J-201ENST00000462773 SBF2Q86WG5 1849 aa23.83■■□□□ 1.41
HLA-J-201ENST00000462773 ZBED9Q6R2W3 1325 aa23.82■■□□□ 1.4
HLA-J-201ENST00000462773 NBPF6Q5VWK0 638 aa23.81■■□□□ 1.4
HLA-J-201ENST00000462773 PTF1AQ7RTS3 328 aa23.81■■□□□ 1.4
HLA-J-201ENST00000462773 DDX54Q8TDD1 881 aaKnown RBP23.81■■□□□ 1.4
HLA-J-201ENST00000462773 NBPF4Q96M43 638 aa23.81■■□□□ 1.4
HLA-J-201ENST00000462773 RAPGEF4Q8WZA2 1011 aa23.81■■□□□ 1.4
HLA-J-201ENST00000462773 ACSBG1Q96GR2 724 aa23.79■■□□□ 1.4
HLA-J-201ENST00000462773 RREB1Q92766 1687 aa23.79■■□□□ 1.4
HLA-J-201ENST00000462773 PPP2R1AP30153 589 aa23.78■■□□□ 1.4
HLA-J-201ENST00000462773 USHBP1Q8N6Y0 703 aa23.78■■□□□ 1.4
HLA-J-201ENST00000462773 NSD2O96028 1365 aa23.78■■□□□ 1.4
HLA-J-201ENST00000462773 KCNQ2O43526 872 aa23.77■■□□□ 1.4
HLA-J-201ENST00000462773 TNNT2P45379 298 aaPredicted RBP23.77■■□□□ 1.4
HLA-J-201ENST00000462773 ZCRB1Q8TBF4 217 aaKnown RBP23.77■■□□□ 1.4
HLA-J-201ENST00000462773 RGPD3A6NKT7 1758 aaPredicted RBP23.77■■□□□ 1.4
HLA-J-201ENST00000462773 RGPD4Q7Z3J3 1758 aa23.77■■□□□ 1.4
HLA-J-201ENST00000462773 MEGF6O75095 1541 aa23.76■■□□□ 1.39
HLA-J-201ENST00000462773 NUP188Q5SRE5 1749 aa23.75■■□□□ 1.39
HLA-J-201ENST00000462773 TATP17735 454 aaPredicted RBP23.75■■□□□ 1.39
HLA-J-201ENST00000462773 POLKQ9UBT6 870 aa23.75■■□□□ 1.39
HLA-J-201ENST00000462773 RGPD2P0DJD1 1756 aa23.75■■□□□ 1.39
HLA-J-201ENST00000462773 NHSQ6T4R5 1651 aa23.73■■□□□ 1.39
HLA-J-201ENST00000462773 ANKRD26Q9UPS8 1709 aa23.73■■□□□ 1.39
HLA-J-201ENST00000462773 TXNRD1Q16881 649 aa23.72■■□□□ 1.39
HLA-J-201ENST00000462773 MORC1Q86VD1 984 aa23.72■■□□□ 1.39
HLA-J-201ENST00000462773 KAT6BQ8WYB5 2073 aa23.71■■□□□ 1.39
HLA-J-201ENST00000462773 MAP2P11137 1827 aaKnown RBP23.7■■□□□ 1.38
HLA-J-201ENST00000462773 PROM2Q8N271 834 aa23.7■■□□□ 1.38
HLA-J-201ENST00000462773 SYTL4Q96C24 671 aaPredicted RBP23.7■■□□□ 1.38
HLA-J-201ENST00000462773 LRP5O75197 1615 aa23.68■■□□□ 1.38
HLA-J-201ENST00000462773 PCDH11XQ9BZA7 1347 aa23.68■■□□□ 1.38
HLA-J-201ENST00000462773 PCDH11YQ9BZA8 1340 aa23.68■■□□□ 1.38
HLA-J-201ENST00000462773 PRIM1P49642 420 aaKnown RBP23.66■■□□□ 1.38
HLA-J-201ENST00000462773 EYA1Q99502 592 aa23.66■■□□□ 1.38
HLA-J-201ENST00000462773 ANO8Q9HCE9 1232 aaPredicted RBP23.65■■□□□ 1.38
HLA-J-201ENST00000462773 STK32BQ9NY57 414 aa23.65■■□□□ 1.38
HLA-J-201ENST00000462773 EIF4A2Q14240 407 aaKnown RBP23.64■■□□□ 1.38
HLA-J-201ENST00000462773 NCAPD2Q15021 1401 aa23.64■■□□□ 1.37
HLA-J-201ENST00000462773 BTAF1O14981 1849 aa23.64■■□□□ 1.37
HLA-J-201ENST00000462773 WDR43Q15061 677 aaKnown RBP eCLIP23.63■■□□□ 1.37
HLA-J-201ENST00000462773 SPG7Q9UQ90 795 aa23.63■■□□□ 1.37
HLA-J-201ENST00000462773 SHANK3Q9BYB0 1731 aa23.63■■□□□ 1.37
HLA-J-201ENST00000462773 DOT1LQ8TEK3 1739 aa23.6■■□□□ 1.37
HLA-J-201ENST00000462773 SLC15A2Q16348 729 aa23.59■■□□□ 1.37
HLA-J-201ENST00000462773 SLC27A3Q5K4L6 730 aa23.59■■□□□ 1.37
HLA-J-201ENST00000462773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.59■■□□□ 1.37
HLA-J-201ENST00000462773 CYP27B1O15528 508 aa23.59■■□□□ 1.37
HLA-J-201ENST00000462773 SPON1Q9HCB6 807 aa23.59■■□□□ 1.37
HLA-J-201ENST00000462773 IGSF1Q8N6C5 1336 aa23.57■■□□□ 1.36
HLA-J-201ENST00000462773 PKD1L3Q7Z443 1732 aa23.55■■□□□ 1.36
HLA-J-201ENST00000462773 PLEKHG2Q9H7P9 1386 aa23.55■■□□□ 1.36
HLA-J-201ENST00000462773 LRRC4BQ9NT99 713 aa23.55■■□□□ 1.36
HLA-J-201ENST00000462773 ADAMTS8Q9UP79 889 aa23.55■■□□□ 1.36
HLA-J-201ENST00000462773 NEFLP07196 543 aa23.54■■□□□ 1.36
HLA-J-201ENST00000462773 MPRIPQ6WCQ1 1025 aa23.53■■□□□ 1.36
HLA-J-201ENST00000462773 NKX1-1Q15270 411 aaPredicted RBP23.52■■□□□ 1.36
HLA-J-201ENST00000462773 IFNL2Q8IZJ0 200 aa23.52■■□□□ 1.36
HLA-J-201ENST00000462773 CFAP53Q96M91 514 aa23.52■■□□□ 1.36
HLA-J-201ENST00000462773 PPP1R1BQ9UD71 204 aaPredicted RBP23.51■■□□□ 1.35
HLA-J-201ENST00000462773 CCNL1Q9UK58 526 aaPredicted RBP23.51■■□□□ 1.35
HLA-J-201ENST00000462773 MTHFSP49914 203 aa23.51■■□□□ 1.35
HLA-J-201ENST00000462773 NUDCQ9Y266 331 aa23.51■■□□□ 1.35
HLA-J-201ENST00000462773 PDGFDQ9GZP0 370 aaPredicted RBP23.5■■□□□ 1.35
HLA-J-201ENST00000462773 PAPPAQ13219 1627 aa23.49■■□□□ 1.35
HLA-J-201ENST00000462773 ZBTB7AO95365 584 aa23.49■■□□□ 1.35
HLA-J-201ENST00000462773 PHKG2P15735 406 aa23.49■■□□□ 1.35
HLA-J-201ENST00000462773 HMGB2P26583 209 aaKnown RBP23.49■■□□□ 1.35
HLA-J-201ENST00000462773 PLEKHO1Q53GL0 409 aaPredicted RBP23.49■■□□□ 1.35
HLA-J-201ENST00000462773 IL13P35225 146 aa23.48■■□□□ 1.35
HLA-J-201ENST00000462773 KCNQ4P56696 695 aa23.48■■□□□ 1.35
HLA-J-201ENST00000462773 ZNF827Q17R98 1081 aa23.48■■□□□ 1.35
HLA-J-201ENST00000462773 AMOTQ4VCS5 1084 aa23.48■■□□□ 1.35
HLA-J-201ENST00000462773 SMARCC1Q92922 1105 aaPredicted RBP23.48■■□□□ 1.35
HLA-J-201ENST00000462773 CASZ1Q86V15 1759 aa23.47■■□□□ 1.35
HLA-J-201ENST00000462773 SULT6B1Q6IMI4 303 aa23.47■■□□□ 1.35
HLA-J-201ENST00000462773 PALLDQ8WX93 1383 aa23.46■■□□□ 1.35
HLA-J-201ENST00000462773 AKT1S1Q96B36 256 aa23.46■■□□□ 1.35
HLA-J-201ENST00000462773 TMOD3Q9NYL9 352 aa23.46■■□□□ 1.35
HLA-J-201ENST00000462773 TFCP2L1Q9NZI6 479 aa23.46■■□□□ 1.35
HLA-J-201ENST00000462773 SUPT16HQ9Y5B9 1047 aaKnown RBP23.46■■□□□ 1.35
HLA-J-201ENST00000462773 LY75O60449 1722 aa23.45■■□□□ 1.34
HLA-J-201ENST00000462773 HSP90AB1P08238 724 aaKnown RBP23.45■■□□□ 1.34
HLA-J-201ENST00000462773 AEBP1Q8IUX7 1158 aa23.45■■□□□ 1.34
HLA-J-201ENST00000462773 MTFR1LQ9H019 292 aa23.45■■□□□ 1.34
HLA-J-201ENST00000462773 PIGBQ92521 554 aa23.44■■□□□ 1.34
HLA-J-201ENST00000462773 ZNF530Q6P9A1 599 aaPredicted RBP23.44■■□□□ 1.34
HLA-J-201ENST00000462773 NGEFQ8N5V2 710 aa23.44■■□□□ 1.34
HLA-J-201ENST00000462773 ATF5Q9Y2D1 282 aaPredicted RBP23.44■■□□□ 1.34
HLA-J-201ENST00000462773 TOGARAM1Q9Y4F4 1720 aa23.44■■□□□ 1.34
HLA-J-201ENST00000462773 KDRP35968 1356 aa23.43■■□□□ 1.34
HLA-J-201ENST00000462773 DIAPH1O60610 1272 aaKnown RBP23.42■■□□□ 1.34
HLA-J-201ENST00000462773 C1orf141Q5JVX7 400 aa23.42■■□□□ 1.34
HLA-J-201ENST00000462773 DCAF5Q96JK2 942 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms