RNA–Protein interactions for RNA: ENST00000462130.1

HDLBP-230, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-230ENST00000462130 SLC15A2Q16348 729 aa14.19□□□□□ -0.14
HDLBP-230ENST00000462130 PIP4P2Q8N4L2 257 aa14.19□□□□□ -0.14
HDLBP-230ENST00000462130 MYOM1P52179 1685 aa14.18□□□□□ -0.14
HDLBP-230ENST00000462130 FAM208AQ9UK61 1670 aaKnown RBP14.18□□□□□ -0.14
HDLBP-230ENST00000462130 PUS7Q96PZ0 661 aaKnown RBP14.18□□□□□ -0.14
HDLBP-230ENST00000462130 LTV1Q96GA3 475 aaPredicted RBP14.17□□□□□ -0.14
HDLBP-230ENST00000462130 CLSPNQ9HAW4 1339 aa14.16□□□□□ -0.14
HDLBP-230ENST00000462130 RGPD2P0DJD1 1756 aa14.15□□□□□ -0.14
HDLBP-230ENST00000462130 SLC24A1O60721 1099 aa14.15□□□□□ -0.14
HDLBP-230ENST00000462130 IP6K1Q92551 441 aa14.15□□□□□ -0.14
HDLBP-230ENST00000462130 COG3Q96JB2 828 aa14.15□□□□□ -0.14
HDLBP-230ENST00000462130 MTFR1LQ9H019 292 aa14.15□□□□□ -0.14
HDLBP-230ENST00000462130 ST20-MTHFSA0A0A6YYL1 179 aa14.14□□□□□ -0.15
HDLBP-230ENST00000462130 PITPNM1O00562 1244 aa14.14□□□□□ -0.15
HDLBP-230ENST00000462130 PTGER2P43116 358 aa14.14□□□□□ -0.15
HDLBP-230ENST00000462130 DDX54Q8TDD1 881 aaKnown RBP14.14□□□□□ -0.15
HDLBP-230ENST00000462130 SP7Q8TDD2 431 aaPredicted RBP14.14□□□□□ -0.15
HDLBP-230ENST00000462130 AMPHP49418 695 aa14.13□□□□□ -0.15
HDLBP-230ENST00000462130 TESK2Q96S53 571 aa14.12□□□□□ -0.15
HDLBP-230ENST00000462130 TIMELESSQ9UNS1 1208 aa14.12□□□□□ -0.15
HDLBP-230ENST00000462130 PAPPAQ13219 1627 aa14.12□□□□□ -0.15
HDLBP-230ENST00000462130 CHD4Q14839 1912 aa14.11□□□□□ -0.15
HDLBP-230ENST00000462130 DOT1LQ8TEK3 1739 aa14.11□□□□□ -0.15
HDLBP-230ENST00000462130 SYTL4Q96C24 671 aaPredicted RBP14.11□□□□□ -0.15
HDLBP-230ENST00000462130 SYT17Q9BSW7 474 aa14.11□□□□□ -0.15
HDLBP-230ENST00000462130 FHDC1Q9C0D6 1143 aaPredicted RBP14.11□□□□□ -0.15
HDLBP-230ENST00000462130 MAP3K19Q56UN5 1328 aa14.11□□□□□ -0.15
HDLBP-230ENST00000462130 HOXC9P31274 260 aa14.1□□□□□ -0.15
HDLBP-230ENST00000462130 QSER1Q2KHR3 1735 aa14.1□□□□□ -0.15
HDLBP-230ENST00000462130 FBLN1P23142 703 aa14.09□□□□□ -0.15
HDLBP-230ENST00000462130 ARXQ96QS3 562 aa14.09□□□□□ -0.15
HDLBP-230ENST00000462130 LRRC4BQ9NT99 713 aa14.09□□□□□ -0.15
HDLBP-230ENST00000462130 ANKRD36BQ8N2N9 1353 aa14.09□□□□□ -0.15
HDLBP-230ENST00000462130 SHANK3Q9BYB0 1731 aa14.08□□□□□ -0.16
HDLBP-230ENST00000462130 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.167e-7■□□□□ 10.9
HDLBP-230ENST00000462130 TMF1P82094 1093 aa14.08□□□□□ -0.16
HDLBP-230ENST00000462130 ZNF827Q17R98 1081 aa14.08□□□□□ -0.16
HDLBP-230ENST00000462130 SLC27A3Q5K4L6 730 aa14.08□□□□□ -0.16
HDLBP-230ENST00000462130 ZCRB1Q8TBF4 217 aaKnown RBP14.08□□□□□ -0.16
HDLBP-230ENST00000462130 KIF20BQ96Q89 1820 aa14.08□□□□□ -0.16
HDLBP-230ENST00000462130 PRIM1P49642 420 aaKnown RBP14.07□□□□□ -0.16
HDLBP-230ENST00000462130 SGIP1Q9BQI5 828 aa14.07□□□□□ -0.16
HDLBP-230ENST00000462130 UTRNP46939 3433 aa14.07□□□□□ -0.16
HDLBP-230ENST00000462130 LY75O60449 1722 aa14.07□□□□□ -0.16
HDLBP-230ENST00000462130 TUBGCP6Q96RT7 1819 aa14.06□□□□□ -0.16
HDLBP-230ENST00000462130 RRS1Q15050 365 aaKnown RBP14.06□□□□□ -0.16
HDLBP-230ENST00000462130 GGNBP2Q9H3C7 697 aa14.06□□□□□ -0.16
HDLBP-230ENST00000462130 SMG6Q86US8 1419 aaKnown RBP14.06□□□□□ -0.16
HDLBP-230ENST00000462130 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
HDLBP-230ENST00000462130 SLC16A10Q8TF71 515 aa14.05□□□□□ -0.16
HDLBP-230ENST00000462130 TFCP2L1Q9NZI6 479 aa14.05□□□□□ -0.16
HDLBP-230ENST00000462130 RTL1A6NKG5 1358 aa14.05□□□□□ -0.16
HDLBP-230ENST00000462130 USP47Q96K76 1375 aa14.05□□□□□ -0.16
HDLBP-230ENST00000462130 FYB1O15117 783 aa14.04□□□□□ -0.16
HDLBP-230ENST00000462130 POLD1P28340 1107 aa14.04□□□□□ -0.16
HDLBP-230ENST00000462130 RAPGEF4Q8WZA2 1011 aa14.04□□□□□ -0.16
HDLBP-230ENST00000462130 MEGF6O75095 1541 aa14.04□□□□□ -0.16
HDLBP-230ENST00000462130 KCNQ4P56696 695 aa14.03□□□□□ -0.16
HDLBP-230ENST00000462130 CDCA8Q53HL2 280 aa14.03□□□□□ -0.16
HDLBP-230ENST00000462130 NBPF6Q5VWK0 638 aa14.03□□□□□ -0.16
HDLBP-230ENST00000462130 USHBP1Q8N6Y0 703 aa14.03□□□□□ -0.16
HDLBP-230ENST00000462130 NBPF4Q96M43 638 aa14.03□□□□□ -0.16
HDLBP-230ENST00000462130 CGNL1Q0VF96 1302 aa14.02□□□□□ -0.17
HDLBP-230ENST00000462130 PNPLA7Q6ZV29 1317 aa14.02□□□□□ -0.17
HDLBP-230ENST00000462130 TATP17735 454 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-230ENST00000462130 CCNL1Q9UK58 526 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-230ENST00000462130 COL24A1Q17RW2 1714 aa14.01□□□□□ -0.17
HDLBP-230ENST00000462130 MAP3K5Q99683 1374 aa14.01□□□□□ -0.17
HDLBP-230ENST00000462130 SPDYE2BA6NHP3 402 aa14.01□□□□□ -0.17
HDLBP-230ENST00000462130 HAX1O00165 279 aa14.01□□□□□ -0.17
HDLBP-230ENST00000462130 SPDYE6P0CI01 402 aa14.01□□□□□ -0.17
HDLBP-230ENST00000462130 GPR162Q16538 588 aa14.01□□□□□ -0.17
HDLBP-230ENST00000462130 SPDYE2Q495Y8 402 aa14.01□□□□□ -0.17
HDLBP-230ENST00000462130 NSD2O96028 1365 aa14□□□□□ -0.17
HDLBP-230ENST00000462130 HSP90AB2PQ58FF8 381 aa14□□□□□ -0.17
HDLBP-230ENST00000462130 ZNF784Q8NCA9 323 aaPredicted RBP14□□□□□ -0.17
HDLBP-230ENST00000462130 MAP2P11137 1827 aaKnown RBP13.99□□□□□ -0.17
HDLBP-230ENST00000462130 INSRP06213 1382 aa13.99□□□□□ -0.17
HDLBP-230ENST00000462130 FLT4P35916 1363 aa13.99□□□□□ -0.17
HDLBP-230ENST00000462130 PELP1Q8IZL8 1130 aaKnown RBP13.99□□□□□ -0.17
HDLBP-230ENST00000462130 ITGB4P16144 1822 aa13.99□□□□□ -0.17
HDLBP-230ENST00000462130 C5P01031 1676 aa13.98□□□□□ -0.17
HDLBP-230ENST00000462130 PCDH11XQ9BZA7 1347 aa13.98□□□□□ -0.17
HDLBP-230ENST00000462130 PCDH11YQ9BZA8 1340 aa13.98□□□□□ -0.17
HDLBP-230ENST00000462130 TAF1LQ8IZX4 1826 aa13.98□□□□□ -0.17
HDLBP-230ENST00000462130 KIF24Q5T7B8 1368 aa13.97□□□□□ -0.17
HDLBP-230ENST00000462130 HMGB2P26583 209 aaKnown RBP13.97□□□□□ -0.17
HDLBP-230ENST00000462130 PPM1GO15355 546 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-230ENST00000462130 MPRIPQ6WCQ1 1025 aa13.96□□□□□ -0.17
HDLBP-230ENST00000462130 NSD3Q9BZ95 1437 aa13.96□□□□□ -0.18
HDLBP-230ENST00000462130 COL23A1Q86Y22 540 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-230ENST00000462130 EMILIN1Q9Y6C2 1016 aa13.95□□□□□ -0.18
HDLBP-230ENST00000462130 PKD1L3Q7Z443 1732 aa13.94□□□□□ -0.18
HDLBP-230ENST00000462130 CARD14Q9BXL6 1004 aa13.94□□□□□ -0.18
HDLBP-230ENST00000462130 TOGARAM1Q9Y4F4 1720 aa13.94□□□□□ -0.18
HDLBP-230ENST00000462130 PALLDQ8WX93 1383 aa13.94□□□□□ -0.18
HDLBP-230ENST00000462130 CYP27B1O15528 508 aa13.93□□□□□ -0.18
HDLBP-230ENST00000462130 MSL1Q68DK7 614 aa13.93□□□□□ -0.18
HDLBP-230ENST00000462130 FLAD1Q8NFF5 587 aa13.93□□□□□ -0.18
HDLBP-230ENST00000462130 NLGN2Q8NFZ4 835 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms