RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 TXNRD1Q16881 649 aa13.42□□□□□ -0.26
CD40-203ENST00000461171 NBPF6Q5VWK0 638 aa13.42□□□□□ -0.26
CD40-203ENST00000461171 NBPF4Q96M43 638 aa13.42□□□□□ -0.26
CD40-203ENST00000461171 NCAPD2Q15021 1401 aa13.41□□□□□ -0.26
CD40-203ENST00000461171 HSPA5P11021 654 aaKnown RBP13.41□□□□□ -0.26
CD40-203ENST00000461171 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
CD40-203ENST00000461171 HSP90AB2PQ58FF8 381 aa13.41□□□□□ -0.26
CD40-203ENST00000461171 ACSBG1Q96GR2 724 aa13.41□□□□□ -0.26
CD40-203ENST00000461171 CGNL1Q0VF96 1302 aa13.4□□□□□ -0.26
CD40-203ENST00000461171 DOT1LQ8TEK3 1739 aa13.4□□□□□ -0.26
CD40-203ENST00000461171 EMILIN1Q9Y6C2 1016 aa13.39□□□□□ -0.27
CD40-203ENST00000461171 NSD2O96028 1365 aa13.39□□□□□ -0.27
CD40-203ENST00000461171 USHBP1Q8N6Y0 703 aa13.38□□□□□ -0.27
CD40-203ENST00000461171 ZCRB1Q8TBF4 217 aaKnown RBP13.38□□□□□ -0.27
CD40-203ENST00000461171 DDX54Q8TDD1 881 aaKnown RBP13.37□□□□□ -0.27
CD40-203ENST00000461171 PDGFDQ9GZP0 370 aaPredicted RBP13.37□□□□□ -0.27
CD40-203ENST00000461171 KAT6BQ8WYB5 2073 aa13.36□□□□□ -0.27
CD40-203ENST00000461171 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
CD40-203ENST00000461171 SLC15A2Q16348 729 aa13.36□□□□□ -0.27
CD40-203ENST00000461171 SPON1Q9HCB6 807 aa13.36□□□□□ -0.27
CD40-203ENST00000461171 STK32BQ9NY57 414 aa13.36□□□□□ -0.27
CD40-203ENST00000461171 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
CD40-203ENST00000461171 LY75O60449 1722 aa13.36□□□□□ -0.27
CD40-203ENST00000461171 MAP2P11137 1827 aaKnown RBP13.35□□□□□ -0.27
CD40-203ENST00000461171 RAPGEF4Q8WZA2 1011 aa13.35□□□□□ -0.27
CD40-203ENST00000461171 LRRC4BQ9NT99 713 aa13.35□□□□□ -0.27
CD40-203ENST00000461171 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
CD40-203ENST00000461171 POLR3GLQ9BT43 218 aa13.34□□□□□ -0.27
CD40-203ENST00000461171 POLKQ9UBT6 870 aa13.34□□□□□ -0.27
CD40-203ENST00000461171 PCDH11XQ9BZA7 1347 aa13.34□□□□□ -0.27
CD40-203ENST00000461171 PCDH11YQ9BZA8 1340 aa13.34□□□□□ -0.27
CD40-203ENST00000461171 TATP17735 454 aaPredicted RBP13.33□□□□□ -0.28
CD40-203ENST00000461171 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
CD40-203ENST00000461171 PANK3Q9H999 370 aa13.33□□□□□ -0.28
CD40-203ENST00000461171 QSER1Q2KHR3 1735 aa13.33□□□□□ -0.28
CD40-203ENST00000461171 TOGARAM1Q9Y4F4 1720 aa13.33□□□□□ -0.28
CD40-203ENST00000461171 PTGER2P43116 358 aa13.32□□□□□ -0.28
CD40-203ENST00000461171 SLC27A3Q5K4L6 730 aa13.32□□□□□ -0.28
CD40-203ENST00000461171 PLEKHG2Q9H7P9 1386 aa13.32□□□□□ -0.28
CD40-203ENST00000461171 PPM1GO15355 546 aaPredicted RBP13.31□□□□□ -0.28
CD40-203ENST00000461171 CYP27B1O15528 508 aa13.31□□□□□ -0.28
CD40-203ENST00000461171 ZBTB7AO95365 584 aa13.31□□□□□ -0.28
CD40-203ENST00000461171 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
CD40-203ENST00000461171 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
CD40-203ENST00000461171 SYTL4Q96C24 671 aaPredicted RBP13.31□□□□□ -0.28
CD40-203ENST00000461171 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
CD40-203ENST00000461171 EYA1Q99502 592 aa13.3□□□□□ -0.28
CD40-203ENST00000461171 SGIP1Q9BQI5 828 aa13.3□□□□□ -0.28
CD40-203ENST00000461171 MTFR1LQ9H019 292 aa13.3□□□□□ -0.28
CD40-203ENST00000461171 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
CD40-203ENST00000461171 KIF7Q2M1P5 1343 aa13.29□□□□□ -0.28
CD40-203ENST00000461171 COL24A1Q17RW2 1714 aa13.28□□□□□ -0.28
CD40-203ENST00000461171 TNNT2P45379 298 aaPredicted RBP13.28□□□□□ -0.28
CD40-203ENST00000461171 EIF4A2Q14240 407 aaKnown RBP13.28□□□□□ -0.28
CD40-203ENST00000461171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.28□□□□□ -0.28
CD40-203ENST00000461171 PPP1R1BQ9UD71 204 aaPredicted RBP13.28□□□□□ -0.28
CD40-203ENST00000461171 IGSF1Q8N6C5 1336 aa13.28□□□□□ -0.28
CD40-203ENST00000461171 ITGB4P16144 1822 aa13.27□□□□□ -0.28
CD40-203ENST00000461171 KCNQ4P56696 695 aa13.27□□□□□ -0.29
CD40-203ENST00000461171 NKX1-1Q15270 411 aaPredicted RBP13.27□□□□□ -0.29
CD40-203ENST00000461171 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
CD40-203ENST00000461171 PNPLA7Q6ZV29 1317 aa13.27□□□□□ -0.29
CD40-203ENST00000461171 C5P01031 1676 aa13.26□□□□□ -0.29
CD40-203ENST00000461171 CCNL1Q9UK58 526 aaPredicted RBP13.26□□□□□ -0.29
CD40-203ENST00000461171 PALLDQ8WX93 1383 aa13.25□□□□□ -0.29
CD40-203ENST00000461171 AMER1Q5JTC6 1135 aaPredicted RBP13.25□□□□□ -0.29
CD40-203ENST00000461171 CNKSR2Q8WXI2 1034 aa13.25□□□□□ -0.29
CD40-203ENST00000461171 SPG7Q9UQ90 795 aa13.25□□□□□ -0.29
CD40-203ENST00000461171 MAP3K5Q99683 1374 aa13.24□□□□□ -0.29
CD40-203ENST00000461171 KNSTRNQ9Y448 316 aa13.24□□□□□ -0.29
CD40-203ENST00000461171 TAF1LQ8IZX4 1826 aa13.24□□□□□ -0.29
CD40-203ENST00000461171 PHKG2P15735 406 aa13.23□□□□□ -0.29
CD40-203ENST00000461171 MORC1Q86VD1 984 aa13.23□□□□□ -0.29
CD40-203ENST00000461171 SLC16A10Q8TF71 515 aa13.23□□□□□ -0.29
CD40-203ENST00000461171 KDRP35968 1356 aa13.22□□□□□ -0.29
CD40-203ENST00000461171 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
CD40-203ENST00000461171 PIGBQ92521 554 aa13.22□□□□□ -0.29
CD40-203ENST00000461171 TFCP2L1Q9NZI6 479 aa13.22□□□□□ -0.29
CD40-203ENST00000461171 PER1O15534 1290 aaPredicted RBP13.21□□□□□ -0.29
CD40-203ENST00000461171 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.29
CD40-203ENST00000461171 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
CD40-203ENST00000461171 SYT17Q9BSW7 474 aa13.21□□□□□ -0.29
CD40-203ENST00000461171 FHDC1Q9C0D6 1143 aaPredicted RBP13.21□□□□□ -0.29
CD40-203ENST00000461171 C4BP0C0L5 1744 aa13.21□□□□□ -0.3
CD40-203ENST00000461171 ARXQ96QS3 562 aa13.2□□□□□ -0.3
CD40-203ENST00000461171 KDM6AO15550 1401 aaPredicted RBP13.2□□□□□ -0.3
CD40-203ENST00000461171 AEBP1Q8IUX7 1158 aa13.19□□□□□ -0.3
CD40-203ENST00000461171 NPC1L1Q9UHC9 1359 aa13.19□□□□□ -0.3
CD40-203ENST00000461171 IL13P35225 146 aa13.18□□□□□ -0.3
CD40-203ENST00000461171 COL23A1Q86Y22 540 aaPredicted RBP13.18□□□□□ -0.3
CD40-203ENST00000461171 TMOD3Q9NYL9 352 aa13.18□□□□□ -0.3
CD40-203ENST00000461171 UBR3Q6ZT12 1888 aa13.18□□□□□ -0.3
CD40-203ENST00000461171 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
CD40-203ENST00000461171 ZNF831Q5JPB2 1677 aa13.17□□□□□ -0.3
CD40-203ENST00000461171 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
CD40-203ENST00000461171 LOC102724428A0A0B4J2F2 783 aa13.16□□□□□ -0.3
CD40-203ENST00000461171 SIK1P57059 783 aa13.16□□□□□ -0.3
CD40-203ENST00000461171 AMOTQ4VCS5 1084 aa13.16□□□□□ -0.3
CD40-203ENST00000461171 PLEKHO1Q53GL0 409 aaPredicted RBP13.16□□□□□ -0.3
CD40-203ENST00000461171 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms