RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 INSRP06213 1382 aa20.41■□□□□ 0.86
ATG4B-213ENST00000460211 EMILIN1Q9Y6C2 1016 aa20.4■□□□□ 0.86
ATG4B-213ENST00000460211 BCL9O00512 1426 aa20.39■□□□□ 0.85
ATG4B-213ENST00000460211 WASHC2AQ641Q2 1341 aa20.39■□□□□ 0.85
ATG4B-213ENST00000460211 PTGER2P43116 358 aa20.39■□□□□ 0.85
ATG4B-213ENST00000460211 SLC15A2Q16348 729 aa20.38■□□□□ 0.85
ATG4B-213ENST00000460211 POLKQ9UBT6 870 aa20.38■□□□□ 0.85
ATG4B-213ENST00000460211 ACSBG1Q96GR2 724 aa20.37■□□□□ 0.85
ATG4B-213ENST00000460211 TNS2Q63HR2 1409 aa20.36■□□□□ 0.85
ATG4B-213ENST00000460211 AMER1Q5JTC6 1135 aaPredicted RBP20.35■□□□□ 0.85
ATG4B-213ENST00000460211 NBPF6Q5VWK0 638 aa20.35■□□□□ 0.85
ATG4B-213ENST00000460211 NBPF4Q96M43 638 aa20.35■□□□□ 0.85
ATG4B-213ENST00000460211 FHDC1Q9C0D6 1143 aaPredicted RBP20.35■□□□□ 0.85
ATG4B-213ENST00000460211 NHSQ6T4R5 1651 aa20.35■□□□□ 0.85
ATG4B-213ENST00000460211 PER1O15534 1290 aaPredicted RBP20.34■□□□□ 0.85
ATG4B-213ENST00000460211 RAPGEF4Q8WZA2 1011 aa20.34■□□□□ 0.85
ATG4B-213ENST00000460211 FAM208AQ9UK61 1670 aaKnown RBP20.34■□□□□ 0.85
ATG4B-213ENST00000460211 SYT17Q9BSW7 474 aa20.32■□□□□ 0.84
ATG4B-213ENST00000460211 TATP17735 454 aaPredicted RBP20.31■□□□□ 0.84
ATG4B-213ENST00000460211 ZEB1P37275 1124 aaPredicted RBP20.31■□□□□ 0.84
ATG4B-213ENST00000460211 USHBP1Q8N6Y0 703 aa20.31■□□□□ 0.84
ATG4B-213ENST00000460211 MTFR1LQ9H019 292 aa20.31■□□□□ 0.84
ATG4B-213ENST00000460211 CC2D1BQ5T0F9 858 aaKnown RBP20.3■□□□□ 0.84
ATG4B-213ENST00000460211 ZNF784Q8NCA9 323 aaPredicted RBP20.3■□□□□ 0.84
ATG4B-213ENST00000460211 ZCRB1Q8TBF4 217 aaKnown RBP20.3■□□□□ 0.84
ATG4B-213ENST00000460211 UTRNP46939 3433 aa20.3■□□□□ 0.84
ATG4B-213ENST00000460211 ANKRD26Q9UPS8 1709 aa20.3■□□□□ 0.84
ATG4B-213ENST00000460211 KAT6BQ8WYB5 2073 aa20.3■□□□□ 0.84
ATG4B-213ENST00000460211 BTAF1O14981 1849 aa20.3■□□□□ 0.84
ATG4B-213ENST00000460211 DDX54Q8TDD1 881 aaKnown RBP20.29■□□□□ 0.84
ATG4B-213ENST00000460211 SGIP1Q9BQI5 828 aa20.28■□□□□ 0.84
ATG4B-213ENST00000460211 MAP2P11137 1827 aaKnown RBP20.27■□□□□ 0.84
ATG4B-213ENST00000460211 NPC1L1Q9UHC9 1359 aa20.27■□□□□ 0.84
ATG4B-213ENST00000460211 PAPPAQ13219 1627 aa20.27■□□□□ 0.83
ATG4B-213ENST00000460211 EIF4A2Q14240 407 aaKnown RBP20.26■□□□□ 0.83
ATG4B-213ENST00000460211 EYA1Q99502 592 aa20.26■□□□□ 0.83
ATG4B-213ENST00000460211 ZNF827Q17R98 1081 aa20.25■□□□□ 0.83
ATG4B-213ENST00000460211 ARXQ96QS3 562 aa20.25■□□□□ 0.83
ATG4B-213ENST00000460211 CHD4Q14839 1912 aa20.25■□□□□ 0.83
ATG4B-213ENST00000460211 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
ATG4B-213ENST00000460211 MEGF6O75095 1541 aa20.23■□□□□ 0.83
ATG4B-213ENST00000460211 LRRC4BQ9NT99 713 aa20.23■□□□□ 0.83
ATG4B-213ENST00000460211 MTHFSP49914 203 aa20.22■□□□□ 0.83
ATG4B-213ENST00000460211 KLHL34Q8N239 644 aa20.22■□□□□ 0.83
ATG4B-213ENST00000460211 SPG7Q9UQ90 795 aa20.22■□□□□ 0.83
ATG4B-213ENST00000460211 PCDH11XQ9BZA7 1347 aa20.21■□□□□ 0.83
ATG4B-213ENST00000460211 PCDH11YQ9BZA8 1340 aa20.21■□□□□ 0.83
ATG4B-213ENST00000460211 RGPD2P0DJD1 1756 aa20.21■□□□□ 0.83
ATG4B-213ENST00000460211 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.19■□□□□ 0.82
ATG4B-213ENST00000460211 NCAPD2Q15021 1401 aa20.19■□□□□ 0.82
ATG4B-213ENST00000460211 KCNQ4P56696 695 aa20.18■□□□□ 0.82
ATG4B-213ENST00000460211 GPR162Q16538 588 aa20.18■□□□□ 0.82
ATG4B-213ENST00000460211 SYTL4Q96C24 671 aaPredicted RBP20.18■□□□□ 0.82
ATG4B-213ENST00000460211 IGSF1Q8N6C5 1336 aa20.18■□□□□ 0.82
ATG4B-213ENST00000460211 SENP3-EIF4A1A0A087X0R7 540 aa20.16■□□□□ 0.82
ATG4B-213ENST00000460211 IL13P35225 146 aa20.16■□□□□ 0.82
ATG4B-213ENST00000460211 PELP1Q8IZL8 1130 aaKnown RBP20.16■□□□□ 0.82
ATG4B-213ENST00000460211 AKT1S1Q96B36 256 aa20.16■□□□□ 0.82
ATG4B-213ENST00000460211 TUBGCP6Q96RT7 1819 aa20.16■□□□□ 0.82
ATG4B-213ENST00000460211 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
ATG4B-213ENST00000460211 MAP3K5Q99683 1374 aa20.15■□□□□ 0.82
ATG4B-213ENST00000460211 PLEKHG2Q9H7P9 1386 aa20.14■□□□□ 0.81
ATG4B-213ENST00000460211 DIAPH1O60610 1272 aaKnown RBP20.14■□□□□ 0.81
ATG4B-213ENST00000460211 PLEKHO1Q53GL0 409 aaPredicted RBP20.14■□□□□ 0.81
ATG4B-213ENST00000460211 QSER1Q2KHR3 1735 aa20.13■□□□□ 0.81
ATG4B-213ENST00000460211 DOT1LQ8TEK3 1739 aa20.13■□□□□ 0.81
ATG4B-213ENST00000460211 PNPLA7Q6ZV29 1317 aa20.13■□□□□ 0.81
ATG4B-213ENST00000460211 CYP27B1O15528 508 aa20.13■□□□□ 0.81
ATG4B-213ENST00000460211 POLD1P28340 1107 aa20.13■□□□□ 0.81
ATG4B-213ENST00000460211 AMOTQ4VCS5 1084 aa20.13■□□□□ 0.81
ATG4B-213ENST00000460211 SULT6B1Q6IMI4 303 aa20.13■□□□□ 0.81
ATG4B-213ENST00000460211 IFNL2Q8IZJ0 200 aa20.13■□□□□ 0.81
ATG4B-213ENST00000460211 CFAP53Q96M91 514 aa20.13■□□□□ 0.81
ATG4B-213ENST00000460211 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
ATG4B-213ENST00000460211 C1QTNF8P60827 252 aa20.12■□□□□ 0.81
ATG4B-213ENST00000460211 SLC27A3Q5K4L6 730 aa20.12■□□□□ 0.81
ATG4B-213ENST00000460211 SLC16A10Q8TF71 515 aa20.11■□□□□ 0.81
ATG4B-213ENST00000460211 NKX1-1Q15270 411 aaPredicted RBP20.1■□□□□ 0.81
ATG4B-213ENST00000460211 HSP90AB1P08238 724 aaKnown RBP20.09■□□□□ 0.81
ATG4B-213ENST00000460211 NLGN2Q8NFZ4 835 aa20.09■□□□□ 0.81
ATG4B-213ENST00000460211 LY75O60449 1722 aa20.08■□□□□ 0.81
ATG4B-213ENST00000460211 COL24A1Q17RW2 1714 aa20.08■□□□□ 0.81
ATG4B-213ENST00000460211 SHANK3Q9BYB0 1731 aa20.08■□□□□ 0.81
ATG4B-213ENST00000460211 GOLGB1Q14789 3259 aaKnown RBP20.08■□□□□ 0.81
ATG4B-213ENST00000460211 PHKG2P15735 406 aa20.08■□□□□ 0.81
ATG4B-213ENST00000460211 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.81
ATG4B-213ENST00000460211 AEBP1Q8IUX7 1158 aa20.08■□□□□ 0.81
ATG4B-213ENST00000460211 MSH5O43196 834 aa20.07■□□□□ 0.8
ATG4B-213ENST00000460211 PPP2R1AP30153 589 aa20.07■□□□□ 0.8
ATG4B-213ENST00000460211 MPRIPQ6WCQ1 1025 aa20.07■□□□□ 0.8
ATG4B-213ENST00000460211 KDRP35968 1356 aa20.07■□□□□ 0.8
ATG4B-213ENST00000460211 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
ATG4B-213ENST00000460211 HMGB2P26583 209 aaKnown RBP20.06■□□□□ 0.8
ATG4B-213ENST00000460211 C1orf141Q5JVX7 400 aa20.06■□□□□ 0.8
ATG4B-213ENST00000460211 ZNF530Q6P9A1 599 aaPredicted RBP20.06■□□□□ 0.8
ATG4B-213ENST00000460211 NUDCQ9Y266 331 aa20.06■□□□□ 0.8
ATG4B-213ENST00000460211 HMOX1P09601 288 aa20.05■□□□□ 0.8
ATG4B-213ENST00000460211 CCNL1Q9UK58 526 aaPredicted RBP20.05■□□□□ 0.8
ATG4B-213ENST00000460211 PKD1L3Q7Z443 1732 aa20.05■□□□□ 0.8
ATG4B-213ENST00000460211 GIGYF1O75420 1035 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms