RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 SBF2Q86WG5 1849 aa15.73■□□□□ 0.11
TRAPPC12-212ENST00000457845 EXOC5O00471 708 aa15.73■□□□□ 0.11
TRAPPC12-212ENST00000457845 FCHSD2O94868 740 aa15.73■□□□□ 0.11
TRAPPC12-212ENST00000457845 HMOX1P09601 288 aa15.73■□□□□ 0.11
TRAPPC12-212ENST00000457845 DDB1Q16531 1140 aa15.73■□□□□ 0.11
TRAPPC12-212ENST00000457845 U2AF1L5P0DN76 240 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC12-212ENST00000457845 U2AF1Q01081 240 aaKnown RBP eCLIP15.72■□□□□ 0.11
TRAPPC12-212ENST00000457845 RSPH6AQ9H0K4 717 aa15.72■□□□□ 0.11
TRAPPC12-212ENST00000457845 KAT6BQ8WYB5 2073 aa15.71■□□□□ 0.11
TRAPPC12-212ENST00000457845 DLG5Q8TDM6 1919 aa15.71■□□□□ 0.11
TRAPPC12-212ENST00000457845 CCER2I3L3R5 266 aa15.71■□□□□ 0.11
TRAPPC12-212ENST00000457845 ZCRB1Q8TBF4 217 aaKnown RBP15.71■□□□□ 0.11
TRAPPC12-212ENST00000457845 KRT27Q7Z3Y8 459 aa15.7■□□□□ 0.1
TRAPPC12-212ENST00000457845 PNISRQ8TF01 805 aaKnown RBP15.7■□□□□ 0.1
TRAPPC12-212ENST00000457845 MRS2Q9HD23 443 aa15.7■□□□□ 0.1
TRAPPC12-212ENST00000457845 BCL9O00512 1426 aa15.69■□□□□ 0.1
TRAPPC12-212ENST00000457845 A0A0G2JS52 829 aa15.69■□□□□ 0.1
TRAPPC12-212ENST00000457845 MYT1Q01538 1121 aa15.69■□□□□ 0.1
TRAPPC12-212ENST00000457845 PDE3BQ13370 1112 aa15.69■□□□□ 0.1
TRAPPC12-212ENST00000457845 AMOTQ4VCS5 1084 aa15.69■□□□□ 0.1
TRAPPC12-212ENST00000457845 ILDR2Q71H61 639 aa15.69■□□□□ 0.1
TRAPPC12-212ENST00000457845 MARCH10Q8NA82 808 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC12-212ENST00000457845 PLEKHO1Q53GL0 409 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC12-212ENST00000457845 MIER1Q8N108 512 aa15.68■□□□□ 0.1
TRAPPC12-212ENST00000457845 PLEKHF1Q96S99 279 aa15.68■□□□□ 0.1
TRAPPC12-212ENST00000457845 SPG7Q9UQ90 795 aa15.68■□□□□ 0.1
TRAPPC12-212ENST00000457845 SCN11AQ9UI33 1791 aa15.67■□□□□ 0.1
TRAPPC12-212ENST00000457845 ITGB4P16144 1822 aa15.67■□□□□ 0.1
TRAPPC12-212ENST00000457845 CYP27B1O15528 508 aa15.67■□□□□ 0.1
TRAPPC12-212ENST00000457845 PRKAR2BP31323 418 aa15.67■□□□□ 0.1
TRAPPC12-212ENST00000457845 ADAMTS8Q9UP79 889 aa15.67■□□□□ 0.1
TRAPPC12-212ENST00000457845 PCDH11XQ9BZA7 1347 aa15.67■□□□□ 0.1
TRAPPC12-212ENST00000457845 PCDH11YQ9BZA8 1340 aa15.67■□□□□ 0.1
TRAPPC12-212ENST00000457845 ADAMTS7Q9UKP4 1686 aa15.67■□□□□ 0.1
TRAPPC12-212ENST00000457845 WDR43Q15061 677 aaKnown RBP eCLIP15.66■□□□□ 0.1
TRAPPC12-212ENST00000457845 PHACTR3Q96KR7 559 aa15.66■□□□□ 0.1
TRAPPC12-212ENST00000457845 PNNQ9H307 717 aaKnown RBP15.66■□□□□ 0.1
TRAPPC12-212ENST00000457845 NKX1-1Q15270 411 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC12-212ENST00000457845 MTHFSDQ2M296 383 aaKnown RBP15.65■□□□□ 0.1
TRAPPC12-212ENST00000457845 DOT1LQ8TEK3 1739 aa15.65■□□□□ 0.1
TRAPPC12-212ENST00000457845 TOGARAM1Q9Y4F4 1720 aa15.65■□□□□ 0.1
TRAPPC12-212ENST00000457845 PHKG2P15735 406 aa15.64■□□□□ 0.09
TRAPPC12-212ENST00000457845 IFNL2Q8IZJ0 200 aa15.64■□□□□ 0.09
TRAPPC12-212ENST00000457845 NHSQ6T4R5 1651 aa15.63■□□□□ 0.09
TRAPPC12-212ENST00000457845 FAM196AQ6ZSG2 479 aa15.63■□□□□ 0.09
TRAPPC12-212ENST00000457845 DDX54Q8TDD1 881 aaKnown RBP15.63■□□□□ 0.09
TRAPPC12-212ENST00000457845 FAM182BQ5T319 152 aa15.62■□□□□ 0.09
TRAPPC12-212ENST00000457845 ZNF530Q6P9A1 599 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC12-212ENST00000457845 GAS2L2Q8NHY3 880 aa15.62■□□□□ 0.09
TRAPPC12-212ENST00000457845 RUNDC1Q96C34 613 aa15.62■□□□□ 0.09
TRAPPC12-212ENST00000457845 TNS1Q9HBL0 1735 aaKnown RBP15.61■□□□□ 0.09
TRAPPC12-212ENST00000457845 AKAP4Q5JQC9 854 aa15.61■□□□□ 0.09
TRAPPC12-212ENST00000457845 EP400Q96L91 3159 aa15.61■□□□□ 0.09
TRAPPC12-212ENST00000457845 SIPA1L3O60292 1781 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC12-212ENST00000457845 HSP90AB1P08238 724 aaKnown RBP15.6■□□□□ 0.09
TRAPPC12-212ENST00000457845 KDM6AO15550 1401 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC12-212ENST00000457845 BTAF1O14981 1849 aa15.59■□□□□ 0.09
TRAPPC12-212ENST00000457845 NEFMP07197 916 aa15.59■□□□□ 0.09
TRAPPC12-212ENST00000457845 C1orf141Q5JVX7 400 aa15.59■□□□□ 0.09
TRAPPC12-212ENST00000457845 DCAF5Q96JK2 942 aa15.59■□□□□ 0.09
TRAPPC12-212ENST00000457845 NFE2L2Q16236 605 aa15.58■□□□□ 0.08
TRAPPC12-212ENST00000457845 CCDC146Q8IYE0 955 aa15.58■□□□□ 0.08
TRAPPC12-212ENST00000457845 MAPK8IP3Q9UPT6 1336 aa15.58■□□□□ 0.08
TRAPPC12-212ENST00000457845 MAP3K5Q99683 1374 aa15.58■□□□□ 0.08
TRAPPC12-212ENST00000457845 GNAT3A8MTJ3 354 aa15.57■□□□□ 0.08
TRAPPC12-212ENST00000457845 HTATSF1O43719 755 aaKnown RBP15.57■□□□□ 0.08
TRAPPC12-212ENST00000457845 TMPOP42166 694 aaKnown RBP15.57■□□□□ 0.08
TRAPPC12-212ENST00000457845 FAM9BQ8IZU0 186 aa15.57■□□□□ 0.08
TRAPPC12-212ENST00000457845 ERVV-2B6SEH9 535 aa15.56■□□□□ 0.08
TRAPPC12-212ENST00000457845 CEMIPQ8WUJ3 1361 aa15.56■□□□□ 0.08
TRAPPC12-212ENST00000457845 MRC1P22897 1456 aa15.56■□□□□ 0.08
TRAPPC12-212ENST00000457845 RGPD3A6NKT7 1758 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC12-212ENST00000457845 RGPD4Q7Z3J3 1758 aa15.55■□□□□ 0.08
TRAPPC12-212ENST00000457845 RNMTO43148 476 aaKnown RBP15.55■□□□□ 0.08
TRAPPC12-212ENST00000457845 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
TRAPPC12-212ENST00000457845 MPRIPQ6WCQ1 1025 aa15.55■□□□□ 0.08
TRAPPC12-212ENST00000457845 IL17REQ8NFR9 667 aa15.55■□□□□ 0.08
TRAPPC12-212ENST00000457845 BCL11BQ9C0K0 894 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC12-212ENST00000457845 LGR6Q9HBX8 967 aa15.55■□□□□ 0.08
TRAPPC12-212ENST00000457845 APAF1O14727 1248 aa15.54■□□□□ 0.08
TRAPPC12-212ENST00000457845 KCNQ2O43526 872 aa15.54■□□□□ 0.08
TRAPPC12-212ENST00000457845 CCDC125Q86Z20 511 aa15.54■□□□□ 0.08
TRAPPC12-212ENST00000457845 LY75O60449 1722 aa15.54■□□□□ 0.08
TRAPPC12-212ENST00000457845 TRIM37O94972 964 aa15.53■□□□□ 0.08
TRAPPC12-212ENST00000457845 PRIM1P49642 420 aaKnown RBP15.53■□□□□ 0.08
TRAPPC12-212ENST00000457845 RIPK4P57078 832 aa15.53■□□□□ 0.08
TRAPPC12-212ENST00000457845 PTF1AQ7RTS3 328 aa15.53■□□□□ 0.08
TRAPPC12-212ENST00000457845 UPF1Q92900 1129 aaKnown RBP eCLIP15.53■□□□□ 0.08
TRAPPC12-212ENST00000457845 ACSBG1Q96GR2 724 aa15.53■□□□□ 0.08
TRAPPC12-212ENST00000457845 PAPPAQ13219 1627 aa15.52■□□□□ 0.08
TRAPPC12-212ENST00000457845 SLC52A2Q9HAB3 445 aa15.51■□□□□ 0.07
TRAPPC12-212ENST00000457845 TRIM35Q9UPQ4 493 aa15.51■□□□□ 0.07
TRAPPC12-212ENST00000457845 UBR2Q8IWV8 1755 aa15.5■□□□□ 0.07
TRAPPC12-212ENST00000457845 LMOD3Q0VAK6 560 aa15.5■□□□□ 0.07
TRAPPC12-212ENST00000457845 PIGBQ92521 554 aa15.5■□□□□ 0.07
TRAPPC12-212ENST00000457845 RTF1Q92541 710 aaKnown RBP15.5■□□□□ 0.07
TRAPPC12-212ENST00000457845 RRP7AQ9Y3A4 280 aaKnown RBP15.5■□□□□ 0.07
TRAPPC12-212ENST00000457845 KDM3BQ7LBC6 1761 aa15.49■□□□□ 0.07
TRAPPC12-212ENST00000457845 ZNF831Q5JPB2 1677 aa15.49■□□□□ 0.07
TRAPPC12-212ENST00000457845 PLSCR1O15162 318 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms