RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 IGSF3O75054 1194 aa8.57□□□□□ -1.04
CUBNP3-201ENST00000457461 PLCD3Q8N3E9 789 aa8.57□□□□□ -1.04
CUBNP3-201ENST00000457461 GGNBP2Q9H3C7 697 aa8.57□□□□□ -1.04
CUBNP3-201ENST00000457461 USP31Q70CQ4 1352 aa8.57□□□□□ -1.04
CUBNP3-201ENST00000457461 TTC21BQ7Z4L5 1316 aa8.56□□□□□ -1.04
CUBNP3-201ENST00000457461 TTC21AQ8NDW8 1320 aa8.56□□□□□ -1.04
CUBNP3-201ENST00000457461 TRPM3Q9HCF6 1732 aaPredicted RBP8.56□□□□□ -1.04
CUBNP3-201ENST00000457461 CDK12Q9NYV4 1490 aaPredicted RBP8.56□□□□□ -1.04
CUBNP3-201ENST00000457461 PROM2Q8N271 834 aa8.56□□□□□ -1.04
CUBNP3-201ENST00000457461 DSG3P32926 999 aa8.56□□□□□ -1.04
CUBNP3-201ENST00000457461 PRDM10Q9NQV6 1147 aa8.56□□□□□ -1.04
CUBNP3-201ENST00000457461 MTHFSP49914 203 aa8.55□□□□□ -1.04
CUBNP3-201ENST00000457461 NME9Q86XW9 330 aa8.55□□□□□ -1.04
CUBNP3-201ENST00000457461 ADAMTS8Q9UP79 889 aa8.55□□□□□ -1.04
CUBNP3-201ENST00000457461 ZBTB12Q9Y330 459 aaPredicted RBP8.55□□□□□ -1.04
CUBNP3-201ENST00000457461 TMEM94Q12767 1356 aa8.55□□□□□ -1.04
CUBNP3-201ENST00000457461 IQSEC2Q5JU85 1478 aa8.54□□□□□ -1.04
CUBNP3-201ENST00000457461 PEAK1Q9H792 1746 aa8.54□□□□□ -1.04
CUBNP3-201ENST00000457461 MST1RQ04912 1400 aa8.54□□□□□ -1.04
CUBNP3-201ENST00000457461 PLCB2Q00722 1185 aa8.54□□□□□ -1.04
CUBNP3-201ENST00000457461 NBPF11Q86T75 865 aa8.54□□□□□ -1.04
CUBNP3-201ENST00000457461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.54□□□□□ -1.04
CUBNP3-201ENST00000457461 CCDC94Q9BW85 323 aaPredicted RBP8.54□□□□□ -1.04
CUBNP3-201ENST00000457461 C1orf167Q5SNV9 1468 aa8.54□□□□□ -1.04
CUBNP3-201ENST00000457461 NUTM2FA1L443 756 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 TTC36A6NLP5 189 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 ESPNB1AK53 854 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 PATL2C9JE40 543 aaKnown RBP8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 DYNC1I1O14576 645 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 HSP90AB3PQ58FF7 597 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 PROSER2Q86WR7 435 aaPredicted RBP8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 C19orf44Q9H6X5 657 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 PHRF1Q9P1Y6 1649 aaKnown RBP8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 ALS2Q96Q42 1657 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 RGPD1P0DJD0 1748 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 FSD2A1L4K1 749 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 OFD1O75665 1012 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 WDR43Q15061 677 aaKnown RBP eCLIP8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 EGFL6Q8IUX8 553 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 COG3Q96JB2 828 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 CFAP53Q96M91 514 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 EFCC1Q9HA90 598 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 POLKQ9UBT6 870 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 ZHX1Q9UKY1 873 aaPredicted RBP8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 PHF8Q9UPP1 1060 aa8.53□□□□□ -1.04
CUBNP3-201ENST00000457461 NGDNQ8NEJ9 315 aaKnown RBP8.52□□□□□ -1.05
CUBNP3-201ENST00000457461 PMFBP1Q8TBY8 1022 aa8.52□□□□□ -1.05
CUBNP3-201ENST00000457461 RBM33Q96EV2 1170 aaKnown RBP8.52□□□□□ -1.05
CUBNP3-201ENST00000457461 ZRANB1Q9UGI0 708 aa8.52□□□□□ -1.05
CUBNP3-201ENST00000457461 ZNF521Q96K83 1311 aa8.52□□□□□ -1.05
CUBNP3-201ENST00000457461 FAM43BQ6ZT52 329 aaPredicted RBP8.51□□□□□ -1.05
CUBNP3-201ENST00000457461 NGEFQ8N5V2 710 aa8.5□□□□□ -1.05
CUBNP3-201ENST00000457461 BSDC1Q9NW68 430 aaPredicted RBP8.5□□□□□ -1.05
CUBNP3-201ENST00000457461 SLIT3O75094 1523 aa8.5□□□□□ -1.05
CUBNP3-201ENST00000457461 NFAT5O94916 1531 aa8.5□□□□□ -1.05
CUBNP3-201ENST00000457461 LTN1O94822 1766 aa8.5□□□□□ -1.05
CUBNP3-201ENST00000457461 KIF24Q5T7B8 1368 aa8.5□□□□□ -1.05
CUBNP3-201ENST00000457461 SOX12O15370 315 aa8.5□□□□□ -1.05
CUBNP3-201ENST00000457461 PDE3BQ13370 1112 aa8.5□□□□□ -1.05
CUBNP3-201ENST00000457461 RAI14Q9P0K7 980 aa8.5□□□□□ -1.05
CUBNP3-201ENST00000457461 RNF123Q5XPI4 1314 aa8.49□□□□□ -1.05
CUBNP3-201ENST00000457461 CRYBG1Q9Y4K1 1723 aa8.49□□□□□ -1.05
CUBNP3-201ENST00000457461 MSH6P52701 1360 aa8.49□□□□□ -1.05
CUBNP3-201ENST00000457461 VASPP50552 380 aaPredicted RBP8.49□□□□□ -1.05
CUBNP3-201ENST00000457461 RIPK4P57078 832 aa8.49□□□□□ -1.05
CUBNP3-201ENST00000457461 ANAPC15P60006 121 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 CADPS2Q86UW7 1296 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 GPATCH11Q8N954 259 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 NUDCQ9Y266 331 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 EMILIN1Q9Y6C2 1016 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 ZNF335Q9H4Z2 1342 aaPredicted RBP8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 VGLL3A8MV65 326 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 DIAPH1O60610 1272 aaKnown RBP8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 FBLN1P23142 703 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 MRE11P49959 708 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 NBPF9Q3BBW0 867 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 ESCO1Q5FWF5 840 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 KIAA1211Q6ZU35 1233 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 ORAI2Q96SN7 254 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 BACH2Q9BYV9 841 aa8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 RBM28Q9NW13 759 aaKnown RBP8.48□□□□□ -1.05
CUBNP3-201ENST00000457461 SBNO1A3KN83 1393 aa8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 MED1Q15648 1581 aaPredicted RBP8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 NHSL1Q5SYE7 1610 aa8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 LTBP4Q8N2S1 1624 aa8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 PXDNQ92626 1479 aa8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 ATF3P18847 181 aa8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 IL13P35225 146 aa8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 TMED8Q6PL24 325 aaPredicted RBP8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 RUNDC1Q96C34 613 aa8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 PLEKHF1Q96S99 279 aa8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 DLG5Q8TDM6 1919 aa8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 RTL1A6NKG5 1358 aa8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 FLT4P35916 1363 aa8.47□□□□□ -1.05
CUBNP3-201ENST00000457461 CCDC27Q2M243 656 aa8.46□□□□□ -1.05
CUBNP3-201ENST00000457461 HS1BP3Q53T59 392 aa8.46□□□□□ -1.05
CUBNP3-201ENST00000457461 CTR9Q6PD62 1173 aa8.46□□□□□ -1.05
CUBNP3-201ENST00000457461 USP19O94966 1318 aa8.46□□□□□ -1.06
CUBNP3-201ENST00000457461 APAF1O14727 1248 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms