RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 CT47A1Q5JQC4 288 aaPredicted RBP5.87□□□□□ -1.47
PCDH9-203ENST00000456367 CLASRPQ8N2M8 674 aaKnown RBP5.87□□□□□ -1.47
PCDH9-203ENST00000456367 ELL2O00472 640 aaPredicted RBP5.87□□□□□ -1.47
PCDH9-203ENST00000456367 GNAI2P04899 355 aa5.87□□□□□ -1.47
PCDH9-203ENST00000456367 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.87□□□□□ -1.47
PCDH9-203ENST00000456367 DYDC1Q8WWB3 177 aa5.87□□□□□ -1.47
PCDH9-203ENST00000456367 VGFO15240 615 aaPredicted RBP5.87□□□□□ -1.47
PCDH9-203ENST00000456367 TDO2P48775 406 aa5.87□□□□□ -1.47
PCDH9-203ENST00000456367 ANAPC15P60006 121 aa5.87□□□□□ -1.47
PCDH9-203ENST00000456367 TRIM34Q9BYJ4 488 aa5.87□□□□□ -1.47
PCDH9-203ENST00000456367 CADPSQ9ULU8 1353 aa5.87□□□□□ -1.47
PCDH9-203ENST00000456367 SUPT6HQ7KZ85 1726 aaKnown RBP5.87□□□□□ -1.47
PCDH9-203ENST00000456367 NEXNQ0ZGT2 675 aa5.87□□□□□ -1.47
PCDH9-203ENST00000456367 STX1AQ16623 288 aa5.87□□□□□ -1.47
PCDH9-203ENST00000456367 ARHGAP29Q52LW3 1261 aa5.87□□□□□ -1.47
PCDH9-203ENST00000456367 IBTKQ9P2D0 1353 aaPredicted RBP5.87□□□□□ -1.47
PCDH9-203ENST00000456367 MPNDQ8N594 471 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.86□□□□□ -1.47
PCDH9-203ENST00000456367 UBTFL1P0CB47 393 aaPredicted RBP5.86□□□□□ -1.47
PCDH9-203ENST00000456367 MTHFSP49914 203 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 MAPK8IP2Q13387 824 aaPredicted RBP5.86□□□□□ -1.47
PCDH9-203ENST00000456367 PPM1EQ8WY54 764 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 PLCD4Q9BRC7 762 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 PDRG1Q9NUG6 133 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 EPB41L2O43491 1005 aaKnown RBP5.86□□□□□ -1.47
PCDH9-203ENST00000456367 XBP1P17861 261 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 PRIM1P49642 420 aaKnown RBP5.86□□□□□ -1.47
PCDH9-203ENST00000456367 COG3Q96JB2 828 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 KDM2BQ8NHM5 1336 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 TOP2BQ02880 1626 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 ME1P48163 572 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 HNRNPMP52272 730 aaKnown RBP eCLIP5.86□□□□□ -1.47
PCDH9-203ENST00000456367 SYCP1Q15431 976 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 CCDC181Q5TID7 509 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 INTS4Q96HW7 963 aaKnown RBP5.86□□□□□ -1.47
PCDH9-203ENST00000456367 MYCBPQ99417 103 aaPredicted RBP5.86□□□□□ -1.47
PCDH9-203ENST00000456367 EFCC1Q9HA90 598 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 LIMCH1Q9UPQ0 1083 aa5.86□□□□□ -1.47
PCDH9-203ENST00000456367 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.86□□□□□ -1.47
PCDH9-203ENST00000456367 DDX58O95786 925 aaKnown RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 FKBP5Q13451 457 aaPredicted RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 TUBB2AQ13885 445 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 TWISTNBQ3B726 338 aaPredicted RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 TRERF1Q96PN7 1200 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 TUBB2BQ9BVA1 445 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 SYNJ1O43426 1573 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 KDM4AO75164 1064 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 IGHDP01880 384 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 ZNF165P49910 485 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 IMMTQ16891 758 aaKnown RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 BLOC1S2Q6QNY1 142 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 CENPHQ9H3R5 247 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 C9orf78Q9NZ63 289 aaPredicted RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 MAGEC2Q9UBF1 373 aaPredicted RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 TRAK1Q9UPV9 953 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 EZRP15311 586 aaKnown RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 RALYLQ86SE5 291 aaKnown RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 FMNL2Q96PY5 1086 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 MKRN1Q9UHC7 482 aaKnown RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 IL16Q14005 1332 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 TOP1P11387 765 aaKnown RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 NAP1L1P55209 391 aaKnown RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 NUCB1Q02818 461 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 TBC1D9Q6ZT07 1266 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 NBPF11Q86T75 865 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 RBM33Q96EV2 1170 aaKnown RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 BRMS1Q9HCU9 246 aa5.85□□□□□ -1.47
PCDH9-203ENST00000456367 LRRFIP2Q9Y608 721 aaKnown RBP5.85□□□□□ -1.47
PCDH9-203ENST00000456367 PDS5BQ9NTI5 1447 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 A0A1B0GUA9 196 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 EBAG9O00559 213 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 KIF4BQ2VIQ3 1234 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 TMEM57Q8N5G2 664 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 CEP112Q8N8E3 955 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 STX6O43752 255 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 HCLS1P14317 486 aaPredicted RBP5.84□□□□□ -1.47
PCDH9-203ENST00000456367 CFAP100Q494V2 611 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 POTEDQ86YR6 584 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 STK26Q9P289 416 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 CFTRP13569 1480 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 CAMSAP2Q08AD1 1489 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 CAPN2P17655 700 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 SAFB2Q14151 953 aaKnown RBP eCLIP5.84□□□□□ -1.47
PCDH9-203ENST00000456367 FBXW7Q969H0 707 aa5.84□□□□□ -1.47
PCDH9-203ENST00000456367 PTPN23Q9H3S7 1636 aa5.84□□□□□ -1.48
PCDH9-203ENST00000456367 SKILP12757 684 aa5.84□□□□□ -1.48
PCDH9-203ENST00000456367 STIM1Q13586 685 aa5.84□□□□□ -1.48
PCDH9-203ENST00000456367 CCDC30Q5VVM6 783 aa5.84□□□□□ -1.48
PCDH9-203ENST00000456367 CCDC186Q7Z3E2 898 aa5.84□□□□□ -1.48
PCDH9-203ENST00000456367 CTCFLQ8NI51 663 aaPredicted RBP5.84□□□□□ -1.48
PCDH9-203ENST00000456367 ZNF622Q969S3 477 aaKnown RBP eCLIP5.84□□□□□ -1.48
PCDH9-203ENST00000456367 PARD3Q8TEW0 1356 aa5.84□□□□□ -1.48
PCDH9-203ENST00000456367 RAB11FIP3O75154 756 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 ZSCAN22P10073 491 aaPredicted RBP5.83□□□□□ -1.48
PCDH9-203ENST00000456367 GBP6Q6ZN66 633 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 TICAM2Q86XR7 235 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 CCDC50Q8IVM0 306 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 EHBP1Q8NDI1 1231 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 ARHGAP45Q92619 1136 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 GOLGA1Q92805 767 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms