RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 API5Q9BZZ5 524 aaKnown RBP25.54■■□□□ 1.68
PDCD2-204ENST00000453163 KIAA0232Q92628 1395 aa25.53■■□□□ 1.68
PDCD2-204ENST00000453163 LTN1O94822 1766 aa25.53■■□□□ 1.68
PDCD2-204ENST00000453163 MIS18AQ9NYP9 233 aa25.53■■□□□ 1.68
PDCD2-204ENST00000453163 NWD1Q149M9 1564 aa25.53■■□□□ 1.68
PDCD2-204ENST00000453163 ADGRL3Q9HAR2 1447 aa25.52■■□□□ 1.68
PDCD2-204ENST00000453163 DAXXQ9UER7 740 aaPredicted RBP25.52■■□□□ 1.68
PDCD2-204ENST00000453163 KIF24Q5T7B8 1368 aa25.52■■□□□ 1.68
PDCD2-204ENST00000453163 RTF1Q92541 710 aaKnown RBP25.52■■□□□ 1.68
PDCD2-204ENST00000453163 CHMP4BQ9H444 224 aaKnown RBP25.52■■□□□ 1.68
PDCD2-204ENST00000453163 NUCB1Q02818 461 aa25.5■■□□□ 1.67
PDCD2-204ENST00000453163 GAS2L2Q8NHY3 880 aa25.5■■□□□ 1.67
PDCD2-204ENST00000453163 LTV1Q96GA3 475 aaPredicted RBP25.5■■□□□ 1.67
PDCD2-204ENST00000453163 RGS12O14924 1447 aa25.49■■□□□ 1.67
PDCD2-204ENST00000453163 NPHP4O75161 1426 aaPredicted RBP25.49■■□□□ 1.67
PDCD2-204ENST00000453163 HAP1P54257 671 aaPredicted RBP25.49■■□□□ 1.67
PDCD2-204ENST00000453163 LNPKQ9C0E8 428 aa25.49■■□□□ 1.67
PDCD2-204ENST00000453163 TSPYL4Q9UJ04 414 aa25.48■■□□□ 1.67
PDCD2-204ENST00000453163 LRRC37A3O60309 1634 aa25.47■■□□□ 1.67
PDCD2-204ENST00000453163 ESCO1Q5FWF5 840 aa25.47■■□□□ 1.67
PDCD2-204ENST00000453163 SIRT2Q8IXJ6 389 aa25.47■■□□□ 1.67
PDCD2-204ENST00000453163 CHD1LQ86WJ1 897 aa25.46■■□□□ 1.67
PDCD2-204ENST00000453163 UPF2Q9HAU5 1272 aaKnown RBP25.45■■□□□ 1.67
PDCD2-204ENST00000453163 NFAT5O94916 1531 aa25.44■■□□□ 1.66
PDCD2-204ENST00000453163 RTL1A6NKG5 1358 aa25.44■■□□□ 1.66
PDCD2-204ENST00000453163 TBC1D32Q96NH3 1257 aa25.43■■□□□ 1.66
PDCD2-204ENST00000453163 PSME1Q06323 249 aa25.43■■□□□ 1.66
PDCD2-204ENST00000453163 INTS3Q68E01 1043 aaKnown RBP25.43■■□□□ 1.66
PDCD2-204ENST00000453163 GCC1Q96CN9 775 aa25.43■■□□□ 1.66
PDCD2-204ENST00000453163 USHBP1Q8N6Y0 703 aa25.42■■□□□ 1.66
PDCD2-204ENST00000453163 ANKRD45Q5TZF3 282 aa25.41■■□□□ 1.66
PDCD2-204ENST00000453163 GNAT3A8MTJ3 354 aa25.41■■□□□ 1.66
PDCD2-204ENST00000453163 SLC4A2P04920 1241 aa25.4■■□□□ 1.66
PDCD2-204ENST00000453163 PTPRCP08575 1304 aa25.4■■□□□ 1.66
PDCD2-204ENST00000453163 MSH6P52701 1360 aa25.4■■□□□ 1.66
PDCD2-204ENST00000453163 IL27Q8NEV9 243 aa25.4■■□□□ 1.66
PDCD2-204ENST00000453163 HTATSF1O43719 755 aaKnown RBP25.39■■□□□ 1.66
PDCD2-204ENST00000453163 MAP3K5Q99683 1374 aa25.39■■□□□ 1.65
PDCD2-204ENST00000453163 IP6K1Q92551 441 aa25.38■■□□□ 1.65
PDCD2-204ENST00000453163 ORAI2Q96SN7 254 aa25.38■■□□□ 1.65
PDCD2-204ENST00000453163 RGPD2P0DJD1 1756 aa25.37■■□□□ 1.65
PDCD2-204ENST00000453163 XPCQ01831 940 aaPredicted RBP25.37■■□□□ 1.65
PDCD2-204ENST00000453163 ZBTB7CA1YPR0 619 aa25.36■■□□□ 1.65
PDCD2-204ENST00000453163 MFAP1P55081 439 aaKnown RBP25.36■■□□□ 1.65
PDCD2-204ENST00000453163 G2E3Q7L622 706 aa25.36■■□□□ 1.65
PDCD2-204ENST00000453163 IL17REQ8NFR9 667 aa25.36■■□□□ 1.65
PDCD2-204ENST00000453163 ATP10DQ9P241 1426 aa25.36■■□□□ 1.65
PDCD2-204ENST00000453163 FAM208AQ9UK61 1670 aaKnown RBP25.35■■□□□ 1.65
PDCD2-204ENST00000453163 NBPF6Q5VWK0 638 aa25.33■■□□□ 1.65
PDCD2-204ENST00000453163 NBPF4Q96M43 638 aa25.33■■□□□ 1.65
PDCD2-204ENST00000453163 PHRF1Q9P1Y6 1649 aaKnown RBP25.33■■□□□ 1.65
PDCD2-204ENST00000453163 PLEKHG5O94827 1062 aa25.32■■□□□ 1.64
PDCD2-204ENST00000453163 KCNH5Q8NCM2 988 aa25.32■■□□□ 1.64
PDCD2-204ENST00000453163 MEIS3Q99687 375 aa25.32■■□□□ 1.64
PDCD2-204ENST00000453163 BECN1Q14457 450 aa25.32■■□□□ 1.64
PDCD2-204ENST00000453163 F6X3S4 739 aa25.31■■□□□ 1.64
PDCD2-204ENST00000453163 C22orf23Q9BZE7 217 aa25.31■■□□□ 1.64
PDCD2-204ENST00000453163 BMP2KLQ5H9B9 411 aa25.3■■□□□ 1.64
PDCD2-204ENST00000453163 ANKRD44Q8N8A2 993 aa25.3■■□□□ 1.64
PDCD2-204ENST00000453163 CEP85Q6P2H3 762 aa25.3■■□□□ 1.64
PDCD2-204ENST00000453163 SLC4A10Q6U841 1118 aa25.29■■□□□ 1.64
PDCD2-204ENST00000453163 DCTPP1Q9H773 170 aa25.29■■□□□ 1.64
PDCD2-204ENST00000453163 NFKBIBQ15653 356 aa25.29■■□□□ 1.64
PDCD2-204ENST00000453163 STK31Q9BXU1 1019 aa25.29■■□□□ 1.64
PDCD2-204ENST00000453163 TAF7Q15545 349 aaPredicted RBP25.28■■□□□ 1.64
PDCD2-204ENST00000453163 PROSER2Q86WR7 435 aaPredicted RBP25.28■■□□□ 1.64
PDCD2-204ENST00000453163 NECTIN2Q92692 538 aa25.28■■□□□ 1.64
PDCD2-204ENST00000453163 LRRC59Q96AG4 307 aaKnown RBP25.28■■□□□ 1.64
PDCD2-204ENST00000453163 TRPM3Q9HCF6 1732 aaPredicted RBP25.28■■□□□ 1.64
PDCD2-204ENST00000453163 SLIT3O75094 1523 aa25.27■■□□□ 1.64
PDCD2-204ENST00000453163 CACNA1FO60840 1977 aa25.27■■□□□ 1.64
PDCD2-204ENST00000453163 LMOD2Q6P5Q4 547 aa25.27■■□□□ 1.64
PDCD2-204ENST00000453163 GCP02774 474 aa25.27■■□□□ 1.64
PDCD2-204ENST00000453163 RPAP2Q8IXW5 612 aaPredicted RBP25.26■■□□□ 1.63
PDCD2-204ENST00000453163 TBC1D2Q9BYX2 928 aa25.26■■□□□ 1.63
PDCD2-204ENST00000453163 CCDC30Q5VVM6 783 aa25.25■■□□□ 1.63
PDCD2-204ENST00000453163 FLIIQ13045 1269 aa25.24■■□□□ 1.63
PDCD2-204ENST00000453163 CEMIPQ8WUJ3 1361 aa25.24■■□□□ 1.63
PDCD2-204ENST00000453163 CCT4P50991 539 aaKnown RBP25.24■■□□□ 1.63
PDCD2-204ENST00000453163 GSE1Q14687 1217 aa25.24■■□□□ 1.63
PDCD2-204ENST00000453163 ARHGEF25Q86VW2 580 aa25.24■■□□□ 1.63
PDCD2-204ENST00000453163 BABAM1Q9NWV8 329 aa25.23■■□□□ 1.63
PDCD2-204ENST00000453163 C1orf167Q5SNV9 1468 aa25.23■■□□□ 1.63
PDCD2-204ENST00000453163 MED1Q15648 1581 aaPredicted RBP25.23■■□□□ 1.63
PDCD2-204ENST00000453163 KIF1AQ12756 1690 aa25.23■■□□□ 1.63
PDCD2-204ENST00000453163 ANO8Q9HCE9 1232 aaPredicted RBP25.22■■□□□ 1.63
PDCD2-204ENST00000453163 FKBP5Q13451 457 aaPredicted RBP25.22■■□□□ 1.63
PDCD2-204ENST00000453163 SLKQ9H2G2 1235 aaPredicted RBP25.22■■□□□ 1.63
PDCD2-204ENST00000453163 LMO7Q8WWI1 1683 aa25.22■■□□□ 1.63
PDCD2-204ENST00000453163 LGR6Q9HBX8 967 aa25.21■■□□□ 1.63
PDCD2-204ENST00000453163 KRT28Q7Z3Y7 464 aa25.21■■□□□ 1.63
PDCD2-204ENST00000453163 PLEKHM2Q8IWE5 1019 aa25.2■■□□□ 1.63
PDCD2-204ENST00000453163 KDM3BQ7LBC6 1761 aa25.2■■□□□ 1.62
PDCD2-204ENST00000453163 C16orf71Q8IYS4 520 aaPredicted RBP25.2■■□□□ 1.62
PDCD2-204ENST00000453163 SOS1Q07889 1333 aaPredicted RBP25.19■■□□□ 1.62
PDCD2-204ENST00000453163 GSPT1P15170 499 aaKnown RBP25.19■■□□□ 1.62
PDCD2-204ENST00000453163 C19orf44Q9H6X5 657 aa25.19■■□□□ 1.62
PDCD2-204ENST00000453163 RTN4Q9NQC3 1192 aaKnown RBP25.19■■□□□ 1.62
PDCD2-204ENST00000453163 RGPD5Q99666 1765 aa25.18■■□□□ 1.62
PDCD2-204ENST00000453163 N4BP2Q86UW6 1770 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms