RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 RRAGDQ9NQL2 400 aaPredicted RBP9.21□□□□□ -0.94
RIF1-206ENST00000453091 LRPPRCP42704 1394 aaKnown RBP9.21□□□□□ -0.94
RIF1-206ENST00000453091 LETM1O95202 739 aaPredicted RBP9.21□□□□□ -0.94
RIF1-206ENST00000453091 TBC1D32Q96NH3 1257 aa9.21□□□□□ -0.94
RIF1-206ENST00000453091 PODXL2Q9NZ53 605 aa9.21□□□□□ -0.94
RIF1-206ENST00000453091 BAG4O95429 457 aaKnown RBP9.2□□□□□ -0.94
RIF1-206ENST00000453091 PLEKHO1Q53GL0 409 aaPredicted RBP9.2□□□□□ -0.94
RIF1-206ENST00000453091 ISM2Q6H9L7 571 aa9.2□□□□□ -0.94
RIF1-206ENST00000453091 NFE2L2Q16236 605 aa9.2□□□□□ -0.94
RIF1-206ENST00000453091 TTC39AQ5SRH9 613 aa9.2□□□□□ -0.94
RIF1-206ENST00000453091 NUP133Q8WUM0 1156 aa9.2□□□□□ -0.94
RIF1-206ENST00000453091 MX1P20591 662 aa9.2□□□□□ -0.94
RIF1-206ENST00000453091 TCEANC2Q96MN5 208 aa9.2□□□□□ -0.94
RIF1-206ENST00000453091 FKBP4Q02790 459 aaKnown RBP eCLIP9.2□□□□□ -0.94
RIF1-206ENST00000453091 CEP89Q96ST8 783 aa9.2□□□□□ -0.94
RIF1-206ENST00000453091 PPP1R1BQ9UD71 204 aaPredicted RBP9.2□□□□□ -0.94
RIF1-206ENST00000453091 BTBD11A6QL63 1104 aa9.2□□□□□ -0.94
RIF1-206ENST00000453091 IPO7O95373 1038 aaKnown RBP9.2□□□□□ -0.94
RIF1-206ENST00000453091 GAS2L2Q8NHY3 880 aa9.2□□□□□ -0.94
RIF1-206ENST00000453091 BOLA2Q9H3K6 86 aa9.2□□□□□ -0.94
RIF1-206ENST00000453091 PCF11O94913 1555 aaKnown RBP9.2□□□□□ -0.94
RIF1-206ENST00000453091 KRT85P78386 507 aa9.19□□□□□ -0.94
RIF1-206ENST00000453091 SAFBQ15424 915 aaKnown RBP eCLIP9.19□□□□□ -0.944e-7■□□□□ 10.5
RIF1-206ENST00000453091 SLC4A8Q2Y0W8 1093 aa9.19□□□□□ -0.94
RIF1-206ENST00000453091 ZSCAN23Q3MJ62 389 aa9.19□□□□□ -0.94
RIF1-206ENST00000453091 MAP7D2Q96T17 732 aa9.19□□□□□ -0.94
RIF1-206ENST00000453091 C16orf45Q96MC5 204 aaPredicted RBP9.19□□□□□ -0.94
RIF1-206ENST00000453091 CNNM1Q9NRU3 951 aa9.19□□□□□ -0.94
RIF1-206ENST00000453091 NAT10Q9H0A0 1025 aaKnown RBP9.19□□□□□ -0.94
RIF1-206ENST00000453091 MRC2Q9UBG0 1479 aa9.19□□□□□ -0.94
RIF1-206ENST00000453091 CIZ1Q9ULV3 898 aaPredicted RBP9.19□□□□□ -0.94
RIF1-206ENST00000453091 EHBP1L1Q8N3D4 1523 aa9.19□□□□□ -0.94
RIF1-206ENST00000453091 KRT24Q2M2I5 525 aa9.19□□□□□ -0.94
RIF1-206ENST00000453091 CCDC70Q6NSX1 233 aa9.19□□□□□ -0.94
RIF1-206ENST00000453091 CCT4P50991 539 aaKnown RBP9.18□□□□□ -0.94
RIF1-206ENST00000453091 IDI1Q13907 227 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 BLOC1S2Q6QNY1 142 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 NECAB1Q8N987 351 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 ANKRD20A12PQ8NF67 263 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 RUFY1Q96T51 708 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 TRIM34Q9BYJ4 488 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 NKTRP30414 1462 aaKnown RBP9.18□□□□□ -0.94
RIF1-206ENST00000453091 TATP17735 454 aaPredicted RBP9.18□□□□□ -0.94
RIF1-206ENST00000453091 GIMAP6Q6P9H5 292 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 EPRSP07814 1512 aaKnown RBP9.18□□□□□ -0.94
RIF1-206ENST00000453091 BIN1O00499 593 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 FOXO3O43524 673 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 HSP90B2PQ58FF3 399 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 PPP4R3BQ5MIZ7 849 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 LRRFIP2Q9Y608 721 aaKnown RBP9.18□□□□□ -0.94
RIF1-206ENST00000453091 POLR3GO15318 223 aaPredicted RBP9.18□□□□□ -0.94
RIF1-206ENST00000453091 DMRT2Q9Y5R5 561 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 AXDND1Q5T1B0 1012 aaPredicted RBP9.18□□□□□ -0.94
RIF1-206ENST00000453091 MYD88Q99836 296 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 MCM2P49736 904 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 PRM3Q9NNZ6 103 aa9.18□□□□□ -0.94
RIF1-206ENST00000453091 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.18□□□□□ -0.94
RIF1-206ENST00000453091 V9GYY5 206 aaPredicted RBP9.18□□□□□ -0.94
RIF1-206ENST00000453091 CC2D2AQ9P2K1 1620 aa9.17□□□□□ -0.94
RIF1-206ENST00000453091 HMGN5P82970 282 aaKnown RBP9.17□□□□□ -0.94
RIF1-206ENST00000453091 CCDC82Q8N4S0 544 aa9.17□□□□□ -0.94
RIF1-206ENST00000453091 CHRNA2Q15822 529 aa9.17□□□□□ -0.94
RIF1-206ENST00000453091 ZNF608Q9ULD9 1512 aaPredicted RBP9.17□□□□□ -0.94
RIF1-206ENST00000453091 ADCY5O95622 1261 aa9.17□□□□□ -0.94
RIF1-206ENST00000453091 ZNF396Q96N95 335 aaPredicted RBP9.17□□□□□ -0.94
RIF1-206ENST00000453091 CCT2P78371 535 aaKnown RBP9.17□□□□□ -0.94
RIF1-206ENST00000453091 AEBP1Q8IUX7 1158 aa9.17□□□□□ -0.94
RIF1-206ENST00000453091 RPAP2Q8IXW5 612 aaPredicted RBP9.17□□□□□ -0.94
RIF1-206ENST00000453091 CPLX3Q8WVH0 158 aa9.17□□□□□ -0.94
RIF1-206ENST00000453091 MBIPQ9NS73 344 aa9.17□□□□□ -0.94
RIF1-206ENST00000453091 HOOK1Q9UJC3 728 aaKnown RBP9.17□□□□□ -0.94
RIF1-206ENST00000453091 ATP2B2Q01814 1243 aa9.16□□□□□ -0.94
RIF1-206ENST00000453091 ZGPATQ8N5A5 531 aaKnown RBP9.16□□□□□ -0.94
RIF1-206ENST00000453091 CNPY2Q9Y2B0 182 aa9.16□□□□□ -0.94
RIF1-206ENST00000453091 MAP3K1Q13233 1512 aa9.16□□□□□ -0.94
RIF1-206ENST00000453091 HCLS1P14317 486 aaPredicted RBP9.16□□□□□ -0.94
RIF1-206ENST00000453091 GJB2P29033 226 aa9.16□□□□□ -0.94
RIF1-206ENST00000453091 CGNQ9P2M7 1197 aaKnown RBP9.16□□□□□ -0.94
RIF1-206ENST00000453091 FCHSD2O94868 740 aa9.16□□□□□ -0.94
RIF1-206ENST00000453091 PLEKHH1Q9ULM0 1364 aa9.16□□□□□ -0.94
RIF1-206ENST00000453091 MAP3K11Q16584 847 aa9.16□□□□□ -0.94
RIF1-206ENST00000453091 NOL10Q9BSC4 688 aaKnown RBP9.16□□□□□ -0.94
RIF1-206ENST00000453091 TAF7Q15545 349 aaPredicted RBP9.16□□□□□ -0.94
RIF1-206ENST00000453091 PHF23Q9BUL5 403 aaPredicted RBP9.16□□□□□ -0.94
RIF1-206ENST00000453091 LRRC2Q9BYS8 371 aa9.16□□□□□ -0.94
RIF1-206ENST00000453091 HSP90AA4PQ58FG1 418 aa9.15□□□□□ -0.94
RIF1-206ENST00000453091 ZNF219Q9P2Y4 722 aaPredicted RBP9.15□□□□□ -0.94
RIF1-206ENST00000453091 ADAMTS2O95450 1211 aa9.15□□□□□ -0.94
RIF1-206ENST00000453091 CLIP2Q9UDT6 1046 aa9.15□□□□□ -0.94
RIF1-206ENST00000453091 MTERF4Q7Z6M4 381 aaKnown RBP9.15□□□□□ -0.94
RIF1-206ENST00000453091 CCDC47Q96A33 483 aaKnown RBP9.15□□□□□ -0.94
RIF1-206ENST00000453091 ATP5J2-PTCD1G3V325 749 aa9.15□□□□□ -0.94
RIF1-206ENST00000453091 H0YHG0 523 aa9.15□□□□□ -0.94
RIF1-206ENST00000453091 TSPYL6Q8N831 410 aa9.15□□□□□ -0.95
RIF1-206ENST00000453091 AK7Q96M32 723 aa9.15□□□□□ -0.95
RIF1-206ENST00000453091 TNNT1P13805 278 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 C17orf53Q8N3J3 647 aaPredicted RBP9.14□□□□□ -0.95
RIF1-206ENST00000453091 NOS1P29475 1434 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 PLEKHH2Q8IVE3 1493 aa9.14□□□□□ -0.95
RIF1-206ENST00000453091 CCDC102AQ96A19 550 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms