RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 BRPF1P55201 1214 aaPredicted RBP14.88□□□□□ -0.03
VTA1-203ENST00000452973 HDAC1Q13547 482 aaPredicted RBP14.88□□□□□ -0.03
VTA1-203ENST00000452973 ADGRL3Q9HAR2 1447 aa14.88□□□□□ -0.03
VTA1-203ENST00000452973 ARHGAP45Q92619 1136 aa14.88□□□□□ -0.03
VTA1-203ENST00000452973 DAXXQ9UER7 740 aaPredicted RBP14.88□□□□□ -0.03
VTA1-203ENST00000452973 LNPKQ9C0E8 428 aa14.87□□□□□ -0.03
VTA1-203ENST00000452973 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
VTA1-203ENST00000452973 API5Q9BZZ5 524 aaKnown RBP14.87□□□□□ -0.03
VTA1-203ENST00000452973 LRRC59Q96AG4 307 aaKnown RBP14.87□□□□□ -0.03
VTA1-203ENST00000452973 GNAT3A8MTJ3 354 aa14.86□□□□□ -0.03
VTA1-203ENST00000452973 KDRP35968 1356 aa14.86□□□□□ -0.03
VTA1-203ENST00000452973 PRKCSHP14314 528 aaPredicted RBP14.85□□□□□ -0.03
VTA1-203ENST00000452973 HSPA2P54652 639 aa14.85□□□□□ -0.03
VTA1-203ENST00000452973 NBPF6Q5VWK0 638 aa14.85□□□□□ -0.03
VTA1-203ENST00000452973 DDX17Q92841 729 aaKnown RBP14.85□□□□□ -0.03
VTA1-203ENST00000452973 DDRGK1Q96HY6 314 aa14.85□□□□□ -0.03
VTA1-203ENST00000452973 NBPF4Q96M43 638 aa14.85□□□□□ -0.03
VTA1-203ENST00000452973 ZNF142P52746 1687 aaPredicted RBP14.85□□□□□ -0.03
VTA1-203ENST00000452973 RGPD1P0DJD0 1748 aa14.85□□□□□ -0.03
VTA1-203ENST00000452973 CRB1P82279 1406 aa14.85□□□□□ -0.03
VTA1-203ENST00000452973 ABCC4O15439 1325 aa14.85□□□□□ -0.03
VTA1-203ENST00000452973 SLC4A10Q6U841 1118 aa14.85□□□□□ -0.03
VTA1-203ENST00000452973 ANKRD45Q5TZF3 282 aa14.84□□□□□ -0.03
VTA1-203ENST00000452973 IP6K1Q92551 441 aa14.84□□□□□ -0.03
VTA1-203ENST00000452973 GCP02774 474 aa14.84□□□□□ -0.03
VTA1-203ENST00000452973 HAP1P54257 671 aaPredicted RBP14.84□□□□□ -0.03
VTA1-203ENST00000452973 SMC5Q8IY18 1101 aa14.84□□□□□ -0.03
VTA1-203ENST00000452973 KRT28Q7Z3Y7 464 aa14.83□□□□□ -0.03
VTA1-203ENST00000452973 IL17REQ8NFR9 667 aa14.83□□□□□ -0.03
VTA1-203ENST00000452973 KCNH5Q8NCM2 988 aa14.83□□□□□ -0.04
VTA1-203ENST00000452973 F6X3S4 739 aa14.83□□□□□ -0.04
VTA1-203ENST00000452973 G2E3Q7L622 706 aa14.83□□□□□ -0.04
VTA1-203ENST00000452973 CHMP4BQ9H444 224 aaKnown RBP14.82□□□□□ -0.04
VTA1-203ENST00000452973 ZC3H6P61129 1189 aaKnown RBP14.82□□□□□ -0.04
VTA1-203ENST00000452973 SIRT2Q8IXJ6 389 aa14.81□□□□□ -0.04
VTA1-203ENST00000452973 C19orf44Q9H6X5 657 aa14.81□□□□□ -0.04
VTA1-203ENST00000452973 ATF3P18847 181 aa14.81□□□□□ -0.04
VTA1-203ENST00000452973 CHD1LQ86WJ1 897 aa14.81□□□□□ -0.04
VTA1-203ENST00000452973 KIAA0232Q92628 1395 aa14.81□□□□□ -0.04
VTA1-203ENST00000452973 APBB1O00213 710 aa14.8□□□□□ -0.04
VTA1-203ENST00000452973 UPF2Q9HAU5 1272 aaKnown RBP14.8□□□□□ -0.04
VTA1-203ENST00000452973 NUCB1Q02818 461 aa14.8□□□□□ -0.04
VTA1-203ENST00000452973 STK31Q9BXU1 1019 aa14.8□□□□□ -0.04
VTA1-203ENST00000452973 KIF24Q5T7B8 1368 aa14.79□□□□□ -0.04
VTA1-203ENST00000452973 MAP3K5Q99683 1374 aa14.79□□□□□ -0.04
VTA1-203ENST00000452973 LGR6Q9HBX8 967 aa14.79□□□□□ -0.04
VTA1-203ENST00000452973 MARF1Q9Y4F3 1742 aaKnown RBP14.79□□□□□ -0.04
VTA1-203ENST00000452973 USP19O94966 1318 aa14.79□□□□□ -0.04
VTA1-203ENST00000452973 MFAP1P55081 439 aaKnown RBP14.79□□□□□ -0.04
VTA1-203ENST00000452973 TAF7Q15545 349 aaPredicted RBP14.79□□□□□ -0.04
VTA1-203ENST00000452973 MEIS3Q99687 375 aa14.78□□□□□ -0.04
VTA1-203ENST00000452973 AXIN2Q9Y2T1 843 aa14.78□□□□□ -0.04
VTA1-203ENST00000452973 INTS3Q68E01 1043 aaKnown RBP14.77□□□□□ -0.04
VTA1-203ENST00000452973 MPRIPQ6WCQ1 1025 aa14.77□□□□□ -0.04
VTA1-203ENST00000452973 ANKRD24Q8TF21 1146 aa14.77□□□□□ -0.04
VTA1-203ENST00000452973 HTATSF1O43719 755 aaKnown RBP14.77□□□□□ -0.05
VTA1-203ENST00000452973 EIF2S2P20042 333 aaKnown RBP14.77□□□□□ -0.05
VTA1-203ENST00000452973 FKBP5Q13451 457 aaPredicted RBP14.77□□□□□ -0.05
VTA1-203ENST00000452973 ZNF530Q6P9A1 599 aaPredicted RBP14.77□□□□□ -0.05
VTA1-203ENST00000452973 ARHGEF25Q86VW2 580 aa14.77□□□□□ -0.05
VTA1-203ENST00000452973 LTN1O94822 1766 aa14.77□□□□□ -0.05
VTA1-203ENST00000452973 TMEM94Q12767 1356 aa14.77□□□□□ -0.05
VTA1-203ENST00000452973 CABLES1Q8TDN4 633 aa14.77□□□□□ -0.05
VTA1-203ENST00000452973 NWD1Q149M9 1564 aa14.77□□□□□ -0.05
VTA1-203ENST00000452973 RTL1A6NKG5 1358 aa14.76□□□□□ -0.05
VTA1-203ENST00000452973 MSH6P52701 1360 aa14.76□□□□□ -0.05
VTA1-203ENST00000452973 GCC1Q96CN9 775 aa14.76□□□□□ -0.05
VTA1-203ENST00000452973 PTPRCP08575 1304 aa14.76□□□□□ -0.05
VTA1-203ENST00000452973 CCDC30Q5VVM6 783 aa14.75□□□□□ -0.05
VTA1-203ENST00000452973 C1orf167Q5SNV9 1468 aa14.75□□□□□ -0.05
VTA1-203ENST00000452973 TEFQ10587 303 aa14.75□□□□□ -0.05
VTA1-203ENST00000452973 RTL5Q5HYW3 569 aaPredicted RBP14.75□□□□□ -0.05
VTA1-203ENST00000452973 NFAT5O94916 1531 aa14.74□□□□□ -0.05
VTA1-203ENST00000452973 RGS12O14924 1447 aa14.74□□□□□ -0.05
VTA1-203ENST00000452973 FLIIQ13045 1269 aa14.74□□□□□ -0.05
VTA1-203ENST00000452973 HDGFL1Q5TGJ6 251 aa14.74□□□□□ -0.05
VTA1-203ENST00000452973 KCNQ3O43525 872 aa14.73□□□□□ -0.05
VTA1-203ENST00000452973 PLEKHO1Q53GL0 409 aaPredicted RBP14.73□□□□□ -0.05
VTA1-203ENST00000452973 C1orf141Q5JVX7 400 aa14.73□□□□□ -0.05
VTA1-203ENST00000452973 NLRP2Q9NX02 1062 aa14.72□□□□□ -0.05
VTA1-203ENST00000452973 C16orf71Q8IYS4 520 aaPredicted RBP14.72□□□□□ -0.05
VTA1-203ENST00000452973 CHRNA2Q15822 529 aa14.71□□□□□ -0.05
VTA1-203ENST00000452973 CEP85Q6P2H3 762 aa14.71□□□□□ -0.05
VTA1-203ENST00000452973 PHAXQ9H814 394 aaKnown RBP14.71□□□□□ -0.05
VTA1-203ENST00000452973 BTBD11A6QL63 1104 aa14.71□□□□□ -0.05
VTA1-203ENST00000452973 SMARCA5O60264 1052 aaPredicted RBP14.71□□□□□ -0.05
VTA1-203ENST00000452973 ANXA1P04083 346 aa14.71□□□□□ -0.05
VTA1-203ENST00000452973 TBC1D32Q96NH3 1257 aa14.71□□□□□ -0.05
VTA1-203ENST00000452973 CSB-PGBD3P0DP91 1061 aa14.71□□□□□ -0.06
VTA1-203ENST00000452973 ANKRD44Q8N8A2 993 aa14.71□□□□□ -0.06
VTA1-203ENST00000452973 RGPD2P0DJD1 1756 aa14.7□□□□□ -0.06
VTA1-203ENST00000452973 CCT4P50991 539 aaKnown RBP14.7□□□□□ -0.06
VTA1-203ENST00000452973 AKAP4Q5JQC9 854 aa14.7□□□□□ -0.06
VTA1-203ENST00000452973 SPRYD3Q8NCJ5 442 aa14.7□□□□□ -0.06
VTA1-203ENST00000452973 C22orf23Q9BZE7 217 aa14.7□□□□□ -0.06
VTA1-203ENST00000452973 DCTPP1Q9H773 170 aa14.69□□□□□ -0.06
VTA1-203ENST00000452973 VIRMAQ69YN4 1812 aaKnown RBP14.69□□□□□ -0.06
VTA1-203ENST00000452973 RPAP2Q8IXW5 612 aaPredicted RBP14.69□□□□□ -0.06
VTA1-203ENST00000452973 CADPS2Q86UW7 1296 aa14.69□□□□□ -0.06
VTA1-203ENST00000452973 SLKQ9H2G2 1235 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms