RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 WDR4P57081 412 aaKnown RBP6.33□□□□□ -1.4
HMGB3P21-201ENST00000452483 NBPF20Q3BBV1 942 aa6.33□□□□□ -1.4
HMGB3P21-201ENST00000452483 MRRFQ96E11 262 aaKnown RBP6.33□□□□□ -1.4
HMGB3P21-201ENST00000452483 ATP13A2Q9NQ11 1180 aa6.33□□□□□ -1.4
HMGB3P21-201ENST00000452483 FBXO45P0C2W1 286 aa6.32□□□□□ -1.4
HMGB3P21-201ENST00000452483 BMP1P13497 986 aa6.32□□□□□ -1.4
HMGB3P21-201ENST00000452483 CCDC116Q8IYX3 515 aa6.32□□□□□ -1.4
HMGB3P21-201ENST00000452483 SREK1Q8WXA9 508 aaKnown RBP6.32□□□□□ -1.4
HMGB3P21-201ENST00000452483 KCTD15Q96SI1 283 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P21-201ENST00000452483 TBC1D2BQ9UPU7 963 aa6.32□□□□□ -1.4
HMGB3P21-201ENST00000452483 ZIC2O95409 532 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P21-201ENST00000452483 DZIP3Q86Y13 1208 aaKnown RBP6.31□□□□□ -1.4
HMGB3P21-201ENST00000452483 ITPKCQ96DU7 683 aa6.31□□□□□ -1.4
HMGB3P21-201ENST00000452483 KLF16Q9BXK1 252 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P21-201ENST00000452483 ZFAND3Q9H8U3 227 aa6.31□□□□□ -1.4
HMGB3P21-201ENST00000452483 KIAA1522Q9P206 1035 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P21-201ENST00000452483 GMPR2Q9P2T1 348 aaKnown RBP6.31□□□□□ -1.4
HMGB3P21-201ENST00000452483 BRPF3Q9ULD4 1205 aa6.31□□□□□ -1.4
HMGB3P21-201ENST00000452483 ANKRD62A6NC57 917 aa6.3□□□□□ -1.4
HMGB3P21-201ENST00000452483 POTECB2RU33 542 aa6.3□□□□□ -1.4
HMGB3P21-201ENST00000452483 NR1H3Q13133 447 aa6.3□□□□□ -1.4
HMGB3P21-201ENST00000452483 NOL8Q76FK4 1167 aaKnown RBP6.3□□□□□ -1.4
HMGB3P21-201ENST00000452483 ZNF526Q8TF50 670 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P21-201ENST00000452483 GLMNQ92990 594 aa6.3□□□□□ -1.4
HMGB3P21-201ENST00000452483 PRM3Q9NNZ6 103 aa6.3□□□□□ -1.4
HMGB3P21-201ENST00000452483 CADPSQ9ULU8 1353 aa6.3□□□□□ -1.4
HMGB3P21-201ENST00000452483 CARNS1A5YM72 827 aa6.29□□□□□ -1.4
HMGB3P21-201ENST00000452483 NEFLP07196 543 aa6.29□□□□□ -1.4
HMGB3P21-201ENST00000452483 TCF3P15923 654 aa6.29□□□□□ -1.4
HMGB3P21-201ENST00000452483 INTS6LQ5JSJ4 861 aaKnown RBP6.29□□□□□ -1.4
HMGB3P21-201ENST00000452483 TRIM46Q7Z4K8 759 aa6.29□□□□□ -1.4
HMGB3P21-201ENST00000452483 PPP1R1BQ9UD71 204 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P21-201ENST00000452483 PCDHB9Q9Y5E1 797 aa6.29□□□□□ -1.4
HMGB3P21-201ENST00000452483 EMILIN1Q9Y6C2 1016 aa6.29□□□□□ -1.4
HMGB3P21-201ENST00000452483 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P21-201ENST00000452483 RFX1P22670 979 aa6.28□□□□□ -1.4
HMGB3P21-201ENST00000452483 DHX9Q08211 1270 aaKnown RBP6.28□□□□□ -1.4
HMGB3P21-201ENST00000452483 PPP1R26Q5T8A7 1209 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P21-201ENST00000452483 MEIOBQ8N635 442 aa6.28□□□□□ -1.4
HMGB3P21-201ENST00000452483 TRIM47Q96LD4 638 aa6.28□□□□□ -1.4
HMGB3P21-201ENST00000452483 SENP2Q9HC62 589 aa6.28□□□□□ -1.4
HMGB3P21-201ENST00000452483 C11orf95C9JLR9 678 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P21-201ENST00000452483 ABL2P42684 1182 aa6.27□□□□□ -1.41
HMGB3P21-201ENST00000452483 RAB15P59190 212 aa6.27□□□□□ -1.41
HMGB3P21-201ENST00000452483 MRPL14Q6P1L8 145 aaKnown RBP6.27□□□□□ -1.41
HMGB3P21-201ENST00000452483 C8orf37Q96NL8 207 aa6.27□□□□□ -1.41
HMGB3P21-201ENST00000452483 VRTNQ9H8Y1 702 aa6.27□□□□□ -1.41
HMGB3P21-201ENST00000452483 GDPD2Q9HCC8 539 aa6.27□□□□□ -1.41
HMGB3P21-201ENST00000452483 PGPEP1Q9NXJ5 209 aa6.27□□□□□ -1.41
HMGB3P21-201ENST00000452483 ESPNB1AK53 854 aa6.26□□□□□ -1.41
HMGB3P21-201ENST00000452483 KIFC2Q96AC6 838 aa6.26□□□□□ -1.41
HMGB3P21-201ENST00000452483 HIRIP3Q9BW71 556 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P21-201ENST00000452483 SEPT12Q8IYM1 358 aa6.25□□□□□ -1.41
HMGB3P21-201ENST00000452483 LINC00528Q8N1L1 170 aa6.25□□□□□ -1.41
HMGB3P21-201ENST00000452483 UBXN4Q92575 508 aa6.25□□□□□ -1.41
HMGB3P21-201ENST00000452483 ZFP42Q96MM3 310 aa6.25□□□□□ -1.41
HMGB3P21-201ENST00000452483 PURBQ96QR8 312 aaKnown RBP6.25□□□□□ -1.41
HMGB3P21-201ENST00000452483 POM121CA8CG34 1229 aa6.24□□□□□ -1.41
HMGB3P21-201ENST00000452483 ERVH48-1M5A8F1 160 aa6.24□□□□□ -1.41
HMGB3P21-201ENST00000452483 SNRPBP14678 240 aaKnown RBP6.24□□□□□ -1.41
HMGB3P21-201ENST00000452483 MCCD1P59942 119 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P21-201ENST00000452483 SCARF1Q14162 830 aa6.24□□□□□ -1.41
HMGB3P21-201ENST00000452483 TXNDC2Q86VQ3 553 aa6.24□□□□□ -1.41
HMGB3P21-201ENST00000452483 ZNF784Q8NCA9 323 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P21-201ENST00000452483 TMPRSS4Q9NRS4 437 aa6.24□□□□□ -1.41
HMGB3P21-201ENST00000452483 MARCH6O60337 910 aa6.23□□□□□ -1.41
HMGB3P21-201ENST00000452483 GIGYF1O75420 1035 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P21-201ENST00000452483 UPP2O95045 317 aa6.23□□□□□ -1.41
HMGB3P21-201ENST00000452483 ERCC3P19447 782 aa6.23□□□□□ -1.41
HMGB3P21-201ENST00000452483 VAC14Q08AM6 782 aa6.23□□□□□ -1.41
HMGB3P21-201ENST00000452483 CBLBQ13191 982 aa6.23□□□□□ -1.41
HMGB3P21-201ENST00000452483 C6orf118Q5T5N4 469 aa6.23□□□□□ -1.41
HMGB3P21-201ENST00000452483 TMED8Q6PL24 325 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P21-201ENST00000452483 BMP2P12643 396 aa6.22□□□□□ -1.41
HMGB3P21-201ENST00000452483 ZNF16P17020 682 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P21-201ENST00000452483 ZC3H6P61129 1189 aaKnown RBP6.22□□□□□ -1.41
HMGB3P21-201ENST00000452483 EIF4G2P78344 907 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB3P21-201ENST00000452483 SF3A1Q15459 793 aaKnown RBP6.22□□□□□ -1.41
HMGB3P21-201ENST00000452483 Q6ZVU0 165 aa6.22□□□□□ -1.41
HMGB3P21-201ENST00000452483 SIRT1Q96EB6 747 aa6.22□□□□□ -1.41
HMGB3P21-201ENST00000452483 TSEN34Q9BSV6 310 aaKnown RBP6.22□□□□□ -1.41
HMGB3P21-201ENST00000452483 BCL2L13Q9BXK5 485 aa6.22□□□□□ -1.41
HMGB3P21-201ENST00000452483 STK17AQ9UEE5 414 aa6.22□□□□□ -1.41
HMGB3P21-201ENST00000452483 GNEQ9Y223 722 aaKnown RBP6.22□□□□□ -1.41
HMGB3P21-201ENST00000452483 WASHC4Q2M389 1173 aa6.21□□□□□ -1.42
HMGB3P21-201ENST00000452483 RNF20Q5VTR2 975 aa6.21□□□□□ -1.42
HMGB3P21-201ENST00000452483 PRDM16Q9HAZ2 1276 aa6.21□□□□□ -1.42
HMGB3P21-201ENST00000452483 CYLDQ9NQC7 956 aa6.21□□□□□ -1.42
HMGB3P21-201ENST00000452483 PLEKHD1A6NEE1 506 aa6.2□□□□□ -1.42
HMGB3P21-201ENST00000452483 LILRA1O75019 489 aa6.2□□□□□ -1.42
HMGB3P21-201ENST00000452483 ADH1AP07327 375 aa6.2□□□□□ -1.42
HMGB3P21-201ENST00000452483 IRX6P78412 446 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P21-201ENST00000452483 B4GALNT3Q6L9W6 998 aa6.2□□□□□ -1.42
HMGB3P21-201ENST00000452483 CFAP70Q5T0N1 1121 aa6.19□□□□□ -1.42
HMGB3P21-201ENST00000452483 GIPC2Q8TF65 315 aa6.19□□□□□ -1.42
HMGB3P21-201ENST00000452483 TRIM52Q96A61 297 aa6.19□□□□□ -1.42
HMGB3P21-201ENST00000452483 AGBL1Q96MI9 1066 aa6.19□□□□□ -1.42
HMGB3P21-201ENST00000452483 RIPOR2Q9Y4F9 1068 aa6.19□□□□□ -1.42
HMGB3P21-201ENST00000452483 PCDHB11Q9Y5F2 797 aa6.19□□□□□ -1.42
HMGB3P21-201ENST00000452483 LOC102724159A0A0B4J2E5 919 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms