RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TATP17735 454 aaPredicted RBP22.03■■□□□ 1.12
SGCE-208ENST00000450385 PTF1AQ7RTS3 328 aa22.03■■□□□ 1.12
SGCE-208ENST00000450385 BTAF1O14981 1849 aa22.01■■□□□ 1.11
SGCE-208ENST00000450385 PLEKHG2Q9H7P9 1386 aa22■■□□□ 1.11
SGCE-208ENST00000450385 ACSBG1Q96GR2 724 aa22■■□□□ 1.11
SGCE-208ENST00000450385 POLKQ9UBT6 870 aa22■■□□□ 1.11
SGCE-208ENST00000450385 EMILIN1Q9Y6C2 1016 aa22■■□□□ 1.11
SGCE-208ENST00000450385 SLC27A3Q5K4L6 730 aa21.99■■□□□ 1.11
SGCE-208ENST00000450385 NCAPD2Q15021 1401 aa21.98■■□□□ 1.11
SGCE-208ENST00000450385 MEGF6O75095 1541 aa21.98■■□□□ 1.11
SGCE-208ENST00000450385 SPON1Q9HCB6 807 aa21.98■■□□□ 1.11
SGCE-208ENST00000450385 STK32BQ9NY57 414 aa21.98■■□□□ 1.11
SGCE-208ENST00000450385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.98■■□□□ 1.112e-6■□□□□ 8.1
SGCE-208ENST00000450385 KNSTRNQ9Y448 316 aa21.98■■□□□ 1.11
SGCE-208ENST00000450385 PCDH11XQ9BZA7 1347 aa21.97■■□□□ 1.11
SGCE-208ENST00000450385 PCDH11YQ9BZA8 1340 aa21.97■■□□□ 1.11
SGCE-208ENST00000450385 SHANK3Q9BYB0 1731 aa21.97■■□□□ 1.11
SGCE-208ENST00000450385 PPM1GO15355 546 aaPredicted RBP21.96■■□□□ 1.11
SGCE-208ENST00000450385 SLC15A2Q16348 729 aa21.96■■□□□ 1.11
SGCE-208ENST00000450385 PRIM1P49642 420 aaKnown RBP21.94■■□□□ 1.1
SGCE-208ENST00000450385 USHBP1Q8N6Y0 703 aa21.93■■□□□ 1.1
SGCE-208ENST00000450385 SPG7Q9UQ90 795 aa21.93■■□□□ 1.1
SGCE-208ENST00000450385 ANO8Q9HCE9 1232 aaPredicted RBP21.92■■□□□ 1.1
SGCE-208ENST00000450385 MORC1Q86VD1 984 aa21.91■■□□□ 1.1
SGCE-208ENST00000450385 EYA1Q99502 592 aa21.91■■□□□ 1.1
SGCE-208ENST00000450385 CASZ1Q86V15 1759 aa21.9■■□□□ 1.1
SGCE-208ENST00000450385 KIF7Q2M1P5 1343 aa21.9■■□□□ 1.1
SGCE-208ENST00000450385 PKD1L3Q7Z443 1732 aa21.9■■□□□ 1.1
SGCE-208ENST00000450385 DOT1LQ8TEK3 1739 aa21.9■■□□□ 1.1
SGCE-208ENST00000450385 NKX1-1Q15270 411 aaPredicted RBP21.9■■□□□ 1.1
SGCE-208ENST00000450385 SYTL4Q96C24 671 aaPredicted RBP21.9■■□□□ 1.1
SGCE-208ENST00000450385 LY75O60449 1722 aa21.89■■□□□ 1.09
SGCE-208ENST00000450385 EIF4A2Q14240 407 aaKnown RBP21.88■■□□□ 1.09
SGCE-208ENST00000450385 PAPPAQ13219 1627 aa21.88■■□□□ 1.09
SGCE-208ENST00000450385 TNNT2P45379 298 aaPredicted RBP21.87■■□□□ 1.09
SGCE-208ENST00000450385 QSER1Q2KHR3 1735 aa21.86■■□□□ 1.09
SGCE-208ENST00000450385 CYP27B1O15528 508 aa21.86■■□□□ 1.09
SGCE-208ENST00000450385 AMER1Q5JTC6 1135 aaPredicted RBP21.86■■□□□ 1.09
SGCE-208ENST00000450385 SLC16A10Q8TF71 515 aa21.86■■□□□ 1.09
SGCE-208ENST00000450385 LRRC4BQ9NT99 713 aa21.86■■□□□ 1.09
SGCE-208ENST00000450385 PPP1R1BQ9UD71 204 aaPredicted RBP21.86■■□□□ 1.09
SGCE-208ENST00000450385 SMARCC1Q92922 1105 aaPredicted RBP21.85■■□□□ 1.09
SGCE-208ENST00000450385 MTFR1LQ9H019 292 aa21.85■■□□□ 1.09
SGCE-208ENST00000450385 IGSF1Q8N6C5 1336 aa21.84■■□□□ 1.09
SGCE-208ENST00000450385 PER1O15534 1290 aaPredicted RBP21.84■■□□□ 1.09
SGCE-208ENST00000450385 IFNL2Q8IZJ0 200 aa21.84■■□□□ 1.09
SGCE-208ENST00000450385 AKT1S1Q96B36 256 aa21.83■■□□□ 1.09
SGCE-208ENST00000450385 NPC1L1Q9UHC9 1359 aa21.83■■□□□ 1.08
SGCE-208ENST00000450385 ITGB4P16144 1822 aa21.83■■□□□ 1.08
SGCE-208ENST00000450385 AMOTQ4VCS5 1084 aa21.82■■□□□ 1.08
SGCE-208ENST00000450385 HSP90AB1P08238 724 aaKnown RBP21.81■■□□□ 1.08
SGCE-208ENST00000450385 CCNL1Q9UK58 526 aaPredicted RBP21.8■■□□□ 1.08
SGCE-208ENST00000450385 PLEKHO1Q53GL0 409 aaPredicted RBP21.79■■□□□ 1.08
SGCE-208ENST00000450385 DCAF8L1A6NGE4 600 aa21.78■■□□□ 1.08
SGCE-208ENST00000450385 PHKG2P15735 406 aa21.78■■□□□ 1.08
SGCE-208ENST00000450385 PTGER2P43116 358 aa21.78■■□□□ 1.08
SGCE-208ENST00000450385 MPRIPQ6WCQ1 1025 aa21.78■■□□□ 1.08
SGCE-208ENST00000450385 TFCP2L1Q9NZI6 479 aa21.78■■□□□ 1.08
SGCE-208ENST00000450385 ZBTB7AO95365 584 aa21.77■■□□□ 1.08
SGCE-208ENST00000450385 PDGFDQ9GZP0 370 aaPredicted RBP21.77■■□□□ 1.08
SGCE-208ENST00000450385 ERVV-2B6SEH9 535 aa21.76■■□□□ 1.07
SGCE-208ENST00000450385 ZNF827Q17R98 1081 aa21.76■■□□□ 1.07
SGCE-208ENST00000450385 FLAD1Q8NFF5 587 aa21.76■■□□□ 1.07
SGCE-208ENST00000450385 PIGBQ92521 554 aa21.75■■□□□ 1.07
SGCE-208ENST00000450385 DCAF5Q96JK2 942 aa21.75■■□□□ 1.07
SGCE-208ENST00000450385 SGIP1Q9BQI5 828 aa21.75■■□□□ 1.07
SGCE-208ENST00000450385 TMOD3Q9NYL9 352 aa21.75■■□□□ 1.07
SGCE-208ENST00000450385 KDRP35968 1356 aa21.74■■□□□ 1.07
SGCE-208ENST00000450385 PALLDQ8WX93 1383 aa21.74■■□□□ 1.07
SGCE-208ENST00000450385 IL13P35225 146 aa21.74■■□□□ 1.07
SGCE-208ENST00000450385 ATF5Q9Y2D1 282 aaPredicted RBP21.74■■□□□ 1.07
SGCE-208ENST00000450385 TOGARAM1Q9Y4F4 1720 aa21.74■■□□□ 1.07
SGCE-208ENST00000450385 MTHFSP49914 203 aa21.73■■□□□ 1.07
SGCE-208ENST00000450385 TAF1LQ8IZX4 1826 aa21.73■■□□□ 1.07
SGCE-208ENST00000450385 COL24A1Q17RW2 1714 aa21.72■■□□□ 1.07
SGCE-208ENST00000450385 C5P01031 1676 aa21.71■■□□□ 1.07
SGCE-208ENST00000450385 PNPLA7Q6ZV29 1317 aa21.71■■□□□ 1.07
SGCE-208ENST00000450385 POLD1P28340 1107 aa21.7■■□□□ 1.06
SGCE-208ENST00000450385 SULT6B1Q6IMI4 303 aa21.7■■□□□ 1.06
SGCE-208ENST00000450385 ARXQ96QS3 562 aa21.7■■□□□ 1.06
SGCE-208ENST00000450385 MAP3K5Q99683 1374 aa21.7■■□□□ 1.06
SGCE-208ENST00000450385 TUBGCP6Q96RT7 1819 aa21.69■■□□□ 1.06
SGCE-208ENST00000450385 C1orf141Q5JVX7 400 aa21.69■■□□□ 1.06
SGCE-208ENST00000450385 LOC102724428A0A0B4J2F2 783 aa21.68■■□□□ 1.06
SGCE-208ENST00000450385 KCNQ4P56696 695 aa21.68■■□□□ 1.06
SGCE-208ENST00000450385 SIK1P57059 783 aa21.68■■□□□ 1.06
SGCE-208ENST00000450385 ZNF831Q5JPB2 1677 aa21.67■■□□□ 1.06
SGCE-208ENST00000450385 DIAPH1O60610 1272 aaKnown RBP21.67■■□□□ 1.06
SGCE-208ENST00000450385 CC2D1BQ5T0F9 858 aaKnown RBP21.67■■□□□ 1.06
SGCE-208ENST00000450385 ZNF530Q6P9A1 599 aaPredicted RBP21.67■■□□□ 1.06
SGCE-208ENST00000450385 SYT17Q9BSW7 474 aa21.66■■□□□ 1.06
SGCE-208ENST00000450385 AKAP4Q5JQC9 854 aa21.64■■□□□ 1.05
SGCE-208ENST00000450385 ASAP1Q9ULH1 1129 aa21.64■■□□□ 1.05
SGCE-208ENST00000450385 C4BP0C0L5 1744 aa21.63■■□□□ 1.05
SGCE-208ENST00000450385 CABP4P57796 275 aa21.63■■□□□ 1.05
SGCE-208ENST00000450385 COL23A1Q86Y22 540 aaPredicted RBP21.63■■□□□ 1.05
SGCE-208ENST00000450385 AEBP1Q8IUX7 1158 aa21.63■■□□□ 1.05
SGCE-208ENST00000450385 AK7Q96M32 723 aa21.63■■□□□ 1.05
SGCE-208ENST00000450385 FHDC1Q9C0D6 1143 aaPredicted RBP21.63■■□□□ 1.05
SGCE-208ENST00000450385 ATG3Q9NT62 314 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms