RNA–Protein interactions for RNA: ENST00000449187.6

CALU-202, Transcript of calumenin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CALU, Length 2,438 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-202ENST00000449187 TATP17735 454 aaPredicted RBP17.26■□□□□ 0.35
CALU-202ENST00000449187 CNGB1Q14028 1251 aaPredicted RBP17.26■□□□□ 0.35
CALU-202ENST00000449187 EYA1Q99502 592 aa17.26■□□□□ 0.35
CALU-202ENST00000449187 AMER1Q5JTC6 1135 aaPredicted RBP17.25■□□□□ 0.35
CALU-202ENST00000449187 NBPF14Q5TI25 921 aa17.25■□□□□ 0.35
CALU-202ENST00000449187 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
CALU-202ENST00000449187 EIF4A2Q14240 407 aaKnown RBP17.24■□□□□ 0.35
CALU-202ENST00000449187 TXNRD1Q16881 649 aa17.24■□□□□ 0.35
CALU-202ENST00000449187 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
CALU-202ENST00000449187 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
CALU-202ENST00000449187 PER1O15534 1290 aaPredicted RBP17.23■□□□□ 0.35
CALU-202ENST00000449187 RREB1Q92766 1687 aa17.22■□□□□ 0.35
CALU-202ENST00000449187 NSD2O96028 1365 aa17.22■□□□□ 0.35
CALU-202ENST00000449187 NUP188Q5SRE5 1749 aa17.22■□□□□ 0.35
CALU-202ENST00000449187 CC2D1BQ5T0F9 858 aaKnown RBP17.22■□□□□ 0.35
CALU-202ENST00000449187 ANKRD26Q9UPS8 1709 aa17.21■□□□□ 0.35
CALU-202ENST00000449187 CYP27B1O15528 508 aa17.2■□□□□ 0.34
CALU-202ENST00000449187 NHSQ6T4R5 1651 aa17.19■□□□□ 0.34
CALU-202ENST00000449187 PDGFDQ9GZP0 370 aaPredicted RBP17.19■□□□□ 0.34
CALU-202ENST00000449187 SHANK3Q9BYB0 1731 aa17.18■□□□□ 0.34
CALU-202ENST00000449187 KCNQ4P56696 695 aa17.18■□□□□ 0.34
CALU-202ENST00000449187 LRRC4BQ9NT99 713 aa17.17■□□□□ 0.34
CALU-202ENST00000449187 PCDH11XQ9BZA7 1347 aa17.17■□□□□ 0.34
CALU-202ENST00000449187 PCDH11YQ9BZA8 1340 aa17.17■□□□□ 0.34
CALU-202ENST00000449187 BTAF1O14981 1849 aa17.17■□□□□ 0.34
CALU-202ENST00000449187 NCAPD2Q15021 1401 aa17.17■□□□□ 0.34
CALU-202ENST00000449187 MTHFSP49914 203 aa17.15■□□□□ 0.34
CALU-202ENST00000449187 RGPD3A6NKT7 1758 aaPredicted RBP17.15■□□□□ 0.34
CALU-202ENST00000449187 RGPD4Q7Z3J3 1758 aa17.15■□□□□ 0.34
CALU-202ENST00000449187 AEBP1Q8IUX7 1158 aa17.15■□□□□ 0.34
CALU-202ENST00000449187 IGSF1Q8N6C5 1336 aa17.14■□□□□ 0.33
CALU-202ENST00000449187 STK32BQ9NY57 414 aa17.14■□□□□ 0.33
CALU-202ENST00000449187 SPG7Q9UQ90 795 aa17.14■□□□□ 0.33
CALU-202ENST00000449187 SLC15A2Q16348 729 aa17.13■□□□□ 0.33
CALU-202ENST00000449187 MPRIPQ6WCQ1 1025 aa17.13■□□□□ 0.33
CALU-202ENST00000449187 DOT1LQ8TEK3 1739 aa17.13■□□□□ 0.33
CALU-202ENST00000449187 IL13P35225 146 aa17.12■□□□□ 0.33
CALU-202ENST00000449187 ZNF827Q17R98 1081 aa17.11■□□□□ 0.33
CALU-202ENST00000449187 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
CALU-202ENST00000449187 ZBTB7AO95365 584 aa17.1■□□□□ 0.33
CALU-202ENST00000449187 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.1■□□□□ 0.337e-7■■□□□ 12.7
CALU-202ENST00000449187 PHKG2P15735 406 aa17.1■□□□□ 0.33
CALU-202ENST00000449187 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
CALU-202ENST00000449187 IFNL2Q8IZJ0 200 aa17.09■□□□□ 0.33
CALU-202ENST00000449187 PIGBQ92521 554 aa17.09■□□□□ 0.33
CALU-202ENST00000449187 LRP5O75197 1615 aa17.09■□□□□ 0.33
CALU-202ENST00000449187 PKD1L3Q7Z443 1732 aa17.08■□□□□ 0.33
CALU-202ENST00000449187 SLC27A3Q5K4L6 730 aa17.08■□□□□ 0.33
CALU-202ENST00000449187 SPON1Q9HCB6 807 aa17.08■□□□□ 0.33
CALU-202ENST00000449187 CCNL1Q9UK58 526 aaPredicted RBP17.08■□□□□ 0.33
CALU-202ENST00000449187 ATF5Q9Y2D1 282 aaPredicted RBP17.08■□□□□ 0.32
CALU-202ENST00000449187 HMOX1P09601 288 aa17.07■□□□□ 0.32
CALU-202ENST00000449187 PLEKHO1Q53GL0 409 aaPredicted RBP17.07■□□□□ 0.32
CALU-202ENST00000449187 NPC1L1Q9UHC9 1359 aa17.06■□□□□ 0.32
CALU-202ENST00000449187 ZNF530Q6P9A1 599 aaPredicted RBP17.06■□□□□ 0.32
CALU-202ENST00000449187 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
CALU-202ENST00000449187 TOGARAM1Q9Y4F4 1720 aa17.05■□□□□ 0.32
CALU-202ENST00000449187 DIAPH1O60610 1272 aaKnown RBP17.05■□□□□ 0.32
CALU-202ENST00000449187 PALLDQ8WX93 1383 aa17.04■□□□□ 0.32
CALU-202ENST00000449187 TMOD3Q9NYL9 352 aa17.04■□□□□ 0.32
CALU-202ENST00000449187 ASAP1Q9ULH1 1129 aa17.04■□□□□ 0.32
CALU-202ENST00000449187 PAPPAQ13219 1627 aa17.04■□□□□ 0.32
CALU-202ENST00000449187 TFCP2L1Q9NZI6 479 aa17.04■□□□□ 0.32
CALU-202ENST00000449187 AMOTQ4VCS5 1084 aa17.03■□□□□ 0.32
CALU-202ENST00000449187 PPP1R1BQ9UD71 204 aaPredicted RBP17.03■□□□□ 0.32
CALU-202ENST00000449187 ITGB4P16144 1822 aa17.03■□□□□ 0.32
CALU-202ENST00000449187 KDRP35968 1356 aa17.02■□□□□ 0.32
CALU-202ENST00000449187 CASZ1Q86V15 1759 aa17.02■□□□□ 0.31
CALU-202ENST00000449187 PTGER2P43116 358 aa17.01■□□□□ 0.31
CALU-202ENST00000449187 LY75O60449 1722 aa17.01■□□□□ 0.31
CALU-202ENST00000449187 PNPLA7Q6ZV29 1317 aa17.01■□□□□ 0.31
CALU-202ENST00000449187 U2SURPO15042 1029 aaKnown RBP17.01■□□□□ 0.31
CALU-202ENST00000449187 SMARCC1Q92922 1105 aaPredicted RBP17.01■□□□□ 0.31
CALU-202ENST00000449187 C1orf141Q5JVX7 400 aa17■□□□□ 0.31
CALU-202ENST00000449187 DCAF5Q96JK2 942 aa17■□□□□ 0.31
CALU-202ENST00000449187 MTFR1LQ9H019 292 aa17■□□□□ 0.31
CALU-202ENST00000449187 ATG3Q9NT62 314 aa16.99■□□□□ 0.31
CALU-202ENST00000449187 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
CALU-202ENST00000449187 SMIM5Q71RC9 77 aa16.99■□□□□ 0.31
CALU-202ENST00000449187 KDM6AO15550 1401 aaPredicted RBP16.99■□□□□ 0.31
CALU-202ENST00000449187 LOC102724428A0A0B4J2F2 783 aa16.98■□□□□ 0.31
CALU-202ENST00000449187 PPP2R1AP30153 589 aa16.98■□□□□ 0.31
CALU-202ENST00000449187 SIK1P57059 783 aa16.98■□□□□ 0.31
CALU-202ENST00000449187 ERVV-2B6SEH9 535 aa16.98■□□□□ 0.31
CALU-202ENST00000449187 MSH5O43196 834 aa16.98■□□□□ 0.31
CALU-202ENST00000449187 CABP4P57796 275 aa16.97■□□□□ 0.31
CALU-202ENST00000449187 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
CALU-202ENST00000449187 COL3A1P02461 1466 aaPredicted RBP16.97■□□□□ 0.31
CALU-202ENST00000449187 MTHFSDQ2M296 383 aaKnown RBP16.97■□□□□ 0.31
CALU-202ENST00000449187 COL23A1Q86Y22 540 aaPredicted RBP16.97■□□□□ 0.31
CALU-202ENST00000449187 AMIGO3Q86WK7 504 aa16.96■□□□□ 0.31
CALU-202ENST00000449187 NFATC2IPQ8NCF5 419 aa16.96■□□□□ 0.31
CALU-202ENST00000449187 SGIP1Q9BQI5 828 aa16.96■□□□□ 0.31
CALU-202ENST00000449187 LGR6Q9HBX8 967 aa16.96■□□□□ 0.31
CALU-202ENST00000449187 ATP6V1AP38606 617 aa16.96■□□□□ 0.3
CALU-202ENST00000449187 ITPK1Q13572 414 aa16.96■□□□□ 0.3
CALU-202ENST00000449187 LINC00116Q8NCU8 138 aa16.95■□□□□ 0.3
CALU-202ENST00000449187 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
CALU-202ENST00000449187 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
CALU-202ENST00000449187 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms