RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 CDCA7Q9BWT1 371 aaPredicted RBP19.36■□□□□ 0.69
SHANK2-210ENST00000449116 OVOS2A0A0G2JMS6 1433 aa19.34■□□□□ 0.69
SHANK2-210ENST00000449116 PARP4Q9UKK3 1724 aaKnown RBP19.34■□□□□ 0.69
SHANK2-210ENST00000449116 AMOTQ4VCS5 1084 aa19.34■□□□□ 0.69
SHANK2-210ENST00000449116 PLEKHO1Q53GL0 409 aaPredicted RBP19.34■□□□□ 0.69
SHANK2-210ENST00000449116 PHF23Q9BUL5 403 aaPredicted RBP19.34■□□□□ 0.69
SHANK2-210ENST00000449116 GLI3P10071 1580 aa19.33■□□□□ 0.69
SHANK2-210ENST00000449116 WNK3Q9BYP7 1800 aa19.33■□□□□ 0.69
SHANK2-210ENST00000449116 APAF1O14727 1248 aa19.33■□□□□ 0.68
SHANK2-210ENST00000449116 GAS2L2Q8NHY3 880 aa19.33■□□□□ 0.68
SHANK2-210ENST00000449116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.33■□□□□ 0.68
SHANK2-210ENST00000449116 FAM98CQ17RN3 349 aaKnown RBP19.32■□□□□ 0.68
SHANK2-210ENST00000449116 MTHFSDQ2M296 383 aaKnown RBP19.32■□□□□ 0.68
SHANK2-210ENST00000449116 NFE2L2Q16236 605 aa19.31■□□□□ 0.68
SHANK2-210ENST00000449116 SPG7Q9UQ90 795 aa19.31■□□□□ 0.68
SHANK2-210ENST00000449116 TMPOP42166 694 aaKnown RBP19.3■□□□□ 0.68
SHANK2-210ENST00000449116 ZCRB1Q8TBF4 217 aaKnown RBP19.3■□□□□ 0.68
SHANK2-210ENST00000449116 RGS17Q9UGC6 210 aaPredicted RBP19.3■□□□□ 0.68
SHANK2-210ENST00000449116 PKD1L3Q7Z443 1732 aa19.3■□□□□ 0.68
SHANK2-210ENST00000449116 RBM6P78332 1123 aaKnown RBP19.29■□□□□ 0.68
SHANK2-210ENST00000449116 HNRNPUQ00839 825 aaKnown RBP eCLIP19.29■□□□□ 0.68
SHANK2-210ENST00000449116 RRP7AQ9Y3A4 280 aaKnown RBP19.29■□□□□ 0.68
SHANK2-210ENST00000449116 EXOC5O00471 708 aa19.28■□□□□ 0.68
SHANK2-210ENST00000449116 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
SHANK2-210ENST00000449116 ZNF530Q6P9A1 599 aaPredicted RBP19.28■□□□□ 0.68
SHANK2-210ENST00000449116 NGEFQ8N5V2 710 aa19.28■□□□□ 0.68
SHANK2-210ENST00000449116 PCDH11XQ9BZA7 1347 aa19.27■□□□□ 0.68
SHANK2-210ENST00000449116 PCDH11YQ9BZA8 1340 aa19.27■□□□□ 0.68
SHANK2-210ENST00000449116 TNS2Q63HR2 1409 aa19.27■□□□□ 0.68
SHANK2-210ENST00000449116 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
SHANK2-210ENST00000449116 ONECUT3O60422 494 aaPredicted RBP19.27■□□□□ 0.68
SHANK2-210ENST00000449116 RIPK4P57078 832 aa19.27■□□□□ 0.68
SHANK2-210ENST00000449116 NEUROD2Q15784 382 aa19.27■□□□□ 0.68
SHANK2-210ENST00000449116 DDB1Q16531 1140 aa19.27■□□□□ 0.68
SHANK2-210ENST00000449116 THSD7AQ9UPZ6 1657 aa19.27■□□□□ 0.67
SHANK2-210ENST00000449116 LRRC37A3O60309 1634 aa19.26■□□□□ 0.67
SHANK2-210ENST00000449116 AKAP4Q5JQC9 854 aa19.26■□□□□ 0.67
SHANK2-210ENST00000449116 C1orf141Q5JVX7 400 aa19.26■□□□□ 0.67
SHANK2-210ENST00000449116 MAP3K5Q99683 1374 aa19.25■□□□□ 0.67
SHANK2-210ENST00000449116 A0A0G2JS52 829 aa19.25■□□□□ 0.67
SHANK2-210ENST00000449116 MYT1Q01538 1121 aa19.25■□□□□ 0.67
SHANK2-210ENST00000449116 IFNL2Q8IZJ0 200 aa19.25■□□□□ 0.67
SHANK2-210ENST00000449116 YTHDC1Q96MU7 727 aaKnown RBP19.25■□□□□ 0.67
SHANK2-210ENST00000449116 GNAT3A8MTJ3 354 aa19.24■□□□□ 0.67
SHANK2-210ENST00000449116 CYP27B1O15528 508 aa19.24■□□□□ 0.67
SHANK2-210ENST00000449116 PHKG2P15735 406 aa19.24■□□□□ 0.67
SHANK2-210ENST00000449116 RXRBP28702 533 aa19.24■□□□□ 0.67
SHANK2-210ENST00000449116 LMOD3Q0VAK6 560 aa19.24■□□□□ 0.67
SHANK2-210ENST00000449116 CCDC27Q2M243 656 aa19.24■□□□□ 0.67
SHANK2-210ENST00000449116 POTEAQ6S8J7 498 aa19.24■□□□□ 0.67
SHANK2-210ENST00000449116 SALL2Q9Y467 1007 aaPredicted RBP19.24■□□□□ 0.67
SHANK2-210ENST00000449116 SHANK3Q9BYB0 1731 aa19.23■□□□□ 0.67
SHANK2-210ENST00000449116 HTATSF1O43719 755 aaKnown RBP19.23■□□□□ 0.67
SHANK2-210ENST00000449116 SEPT12Q8IYM1 358 aa19.23■□□□□ 0.67
SHANK2-210ENST00000449116 DDX54Q8TDD1 881 aaKnown RBP19.23■□□□□ 0.67
SHANK2-210ENST00000449116 HSP90AB1P08238 724 aaKnown RBP19.22■□□□□ 0.67
SHANK2-210ENST00000449116 RTF1Q92541 710 aaKnown RBP19.22■□□□□ 0.67
SHANK2-210ENST00000449116 TRIM35Q9UPQ4 493 aa19.22■□□□□ 0.67
SHANK2-210ENST00000449116 DLG5Q8TDM6 1919 aa19.21■□□□□ 0.67
SHANK2-210ENST00000449116 ZBED9Q6R2W3 1325 aa19.21■□□□□ 0.67
SHANK2-210ENST00000449116 PDE3BQ13370 1112 aa19.2■□□□□ 0.66
SHANK2-210ENST00000449116 WWC1Q8IX03 1113 aa19.2■□□□□ 0.66
SHANK2-210ENST00000449116 NKX1-1Q15270 411 aaPredicted RBP19.19■□□□□ 0.66
SHANK2-210ENST00000449116 MPRIPQ6WCQ1 1025 aa19.19■□□□□ 0.66
SHANK2-210ENST00000449116 DCAF5Q96JK2 942 aa19.19■□□□□ 0.66
SHANK2-210ENST00000449116 DCTN1Q14203 1278 aa19.18■□□□□ 0.66
SHANK2-210ENST00000449116 MCM10Q7L590 875 aa19.18■□□□□ 0.66
SHANK2-210ENST00000449116 MARCH10Q8NA82 808 aaPredicted RBP19.18■□□□□ 0.66
SHANK2-210ENST00000449116 ZNF521Q96K83 1311 aa19.18■□□□□ 0.66
SHANK2-210ENST00000449116 RNMTO43148 476 aaKnown RBP19.17■□□□□ 0.66
SHANK2-210ENST00000449116 IL17REQ8NFR9 667 aa19.17■□□□□ 0.66
SHANK2-210ENST00000449116 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
SHANK2-210ENST00000449116 LGR6Q9HBX8 967 aa19.16■□□□□ 0.66
SHANK2-210ENST00000449116 ADAMTS7Q9UKP4 1686 aa19.16■□□□□ 0.66
SHANK2-210ENST00000449116 CEMIPQ8WUJ3 1361 aa19.16■□□□□ 0.66
SHANK2-210ENST00000449116 RGS12O14924 1447 aa19.16■□□□□ 0.66
SHANK2-210ENST00000449116 CALD1Q05682 793 aaKnown RBP19.15■□□□□ 0.66
SHANK2-210ENST00000449116 WDR63Q8IWG1 891 aa19.15■□□□□ 0.66
SHANK2-210ENST00000449116 THUMPD2Q9BTF0 503 aaKnown RBP19.15■□□□□ 0.66
SHANK2-210ENST00000449116 KRT27Q7Z3Y8 459 aa19.13■□□□□ 0.65
SHANK2-210ENST00000449116 SCN11AQ9UI33 1791 aa19.13■□□□□ 0.65
SHANK2-210ENST00000449116 IL16Q14005 1332 aa19.12■□□□□ 0.65
SHANK2-210ENST00000449116 ERVV-2B6SEH9 535 aa19.12■□□□□ 0.65
SHANK2-210ENST00000449116 GOLGA2Q08379 1002 aa19.12■□□□□ 0.65
SHANK2-210ENST00000449116 TEFQ10587 303 aa19.12■□□□□ 0.65
SHANK2-210ENST00000449116 MRC1P22897 1456 aa19.11■□□□□ 0.65
SHANK2-210ENST00000449116 BCL9O00512 1426 aa19.11■□□□□ 0.65
SHANK2-210ENST00000449116 BRWD3Q6RI45 1802 aa19.11■□□□□ 0.65
SHANK2-210ENST00000449116 CABP4P57796 275 aa19.1■□□□□ 0.65
SHANK2-210ENST00000449116 SLC52A2Q9HAB3 445 aa19.1■□□□□ 0.65
SHANK2-210ENST00000449116 IFT57Q9NWB7 429 aa19.1■□□□□ 0.65
SHANK2-210ENST00000449116 TOGARAM1Q9Y4F4 1720 aa19.1■□□□□ 0.65
SHANK2-210ENST00000449116 VIRMAQ69YN4 1812 aaKnown RBP19.09■□□□□ 0.65
SHANK2-210ENST00000449116 TAF7Q15545 349 aaPredicted RBP19.09■□□□□ 0.65
SHANK2-210ENST00000449116 E9PSI1 815 aa19.08■□□□□ 0.64
SHANK2-210ENST00000449116 GNAI1P63096 354 aa19.08■□□□□ 0.64
SHANK2-210ENST00000449116 CFAP44Q96MT7 982 aa19.08■□□□□ 0.64
SHANK2-210ENST00000449116 DOT1LQ8TEK3 1739 aa19.08■□□□□ 0.64
SHANK2-210ENST00000449116 ZNF853P0CG23 659 aa19.07■□□□□ 0.64
SHANK2-210ENST00000449116 FAM182BQ5T319 152 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms