RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 FAM208AQ9UK61 1670 aaKnown RBP34.36■■■■□ 3.09
HTATSF1-203ENST00000448450 UTRNP46939 3433 aa34.34■■■■□ 3.09
HTATSF1-203ENST00000448450 TNNT2P45379 298 aaPredicted RBP34.33■■■■□ 3.09
HTATSF1-203ENST00000448450 FHDC1Q9C0D6 1143 aaPredicted RBP34.33■■■■□ 3.09
HTATSF1-203ENST00000448450 KNSTRNQ9Y448 316 aa34.33■■■■□ 3.09
HTATSF1-203ENST00000448450 WASHC2AQ641Q2 1341 aa34.31■■■■□ 3.08
HTATSF1-203ENST00000448450 PPM1GO15355 546 aaPredicted RBP34.31■■■■□ 3.08
HTATSF1-203ENST00000448450 EMILIN1Q9Y6C2 1016 aa34.31■■■■□ 3.08
HTATSF1-203ENST00000448450 SYT17Q9BSW7 474 aa34.3■■■■□ 3.08
HTATSF1-203ENST00000448450 RTL1A6NKG5 1358 aa34.29■■■■□ 3.08
HTATSF1-203ENST00000448450 HSP90AB2PQ58FF8 381 aa34.29■■■■□ 3.08
HTATSF1-203ENST00000448450 SGIP1Q9BQI5 828 aa34.29■■■■□ 3.08
HTATSF1-203ENST00000448450 FLT4P35916 1363 aa34.24■■■■□ 3.07
HTATSF1-203ENST00000448450 ANKRD26Q9UPS8 1709 aa34.24■■■■□ 3.07
HTATSF1-203ENST00000448450 ARXQ96QS3 562 aa34.24■■■■□ 3.07
HTATSF1-203ENST00000448450 MAP2P11137 1827 aaKnown RBP34.24■■■■□ 3.07
HTATSF1-203ENST00000448450 MORC1Q86VD1 984 aa34.23■■■■□ 3.07
HTATSF1-203ENST00000448450 CHD4Q14839 1912 aa34.23■■■■□ 3.07
HTATSF1-203ENST00000448450 QSER1Q2KHR3 1735 aa34.23■■■■□ 3.07
HTATSF1-203ENST00000448450 RGPD2P0DJD1 1756 aa34.22■■■■□ 3.07
HTATSF1-203ENST00000448450 ZNF827Q17R98 1081 aa34.22■■■■□ 3.07
HTATSF1-203ENST00000448450 POLKQ9UBT6 870 aa34.22■■■■□ 3.07
HTATSF1-203ENST00000448450 NSD2O96028 1365 aa34.22■■■■□ 3.07
HTATSF1-203ENST00000448450 DDX54Q8TDD1 881 aaKnown RBP34.21■■■■□ 3.07
HTATSF1-203ENST00000448450 LRRC4BQ9NT99 713 aa34.21■■■■□ 3.07
HTATSF1-203ENST00000448450 INSRP06213 1382 aa34.21■■■■□ 3.07
HTATSF1-203ENST00000448450 NBPF6Q5VWK0 638 aa34.2■■■■□ 3.07
HTATSF1-203ENST00000448450 NBPF4Q96M43 638 aa34.2■■■■□ 3.07
HTATSF1-203ENST00000448450 KIF24Q5T7B8 1368 aa34.2■■■■□ 3.07
HTATSF1-203ENST00000448450 MAP3K5Q99683 1374 aa34.2■■■■□ 3.07
HTATSF1-203ENST00000448450 AMER1Q5JTC6 1135 aaPredicted RBP34.19■■■■□ 3.06
HTATSF1-203ENST00000448450 SLC27A3Q5K4L6 730 aa34.19■■■■□ 3.06
HTATSF1-203ENST00000448450 DOT1LQ8TEK3 1739 aa34.18■■■■□ 3.06
HTATSF1-203ENST00000448450 PER1O15534 1290 aaPredicted RBP34.18■■■■□ 3.06
HTATSF1-203ENST00000448450 USHBP1Q8N6Y0 703 aa34.18■■■■□ 3.06
HTATSF1-203ENST00000448450 SMG6Q86US8 1419 aaKnown RBP34.18■■■■□ 3.06
HTATSF1-203ENST00000448450 ZNF784Q8NCA9 323 aaPredicted RBP34.16■■■■□ 3.06
HTATSF1-203ENST00000448450 CNGB1Q14028 1251 aaPredicted RBP34.15■■■■□ 3.06
HTATSF1-203ENST00000448450 AKT1S1Q96B36 256 aa34.14■■■■□ 3.06
HTATSF1-203ENST00000448450 CC2D1BQ5T0F9 858 aaKnown RBP34.13■■■■□ 3.05
HTATSF1-203ENST00000448450 SLC16A10Q8TF71 515 aa34.13■■■■□ 3.05
HTATSF1-203ENST00000448450 SYTL4Q96C24 671 aaPredicted RBP34.13■■■■□ 3.05
HTATSF1-203ENST00000448450 SHANK3Q9BYB0 1731 aa34.13■■■■□ 3.05
HTATSF1-203ENST00000448450 TUBGCP6Q96RT7 1819 aa34.12■■■■□ 3.05
HTATSF1-203ENST00000448450 LY75O60449 1722 aa34.12■■■■□ 3.05
HTATSF1-203ENST00000448450 COL24A1Q17RW2 1714 aa34.1■■■■□ 3.05
HTATSF1-203ENST00000448450 POLD1P28340 1107 aa34.08■■■■□ 3.05
HTATSF1-203ENST00000448450 PRIM1P49642 420 aaKnown RBP34.08■■■■□ 3.05
HTATSF1-203ENST00000448450 PNPLA7Q6ZV29 1317 aa34.07■■■■□ 3.05
HTATSF1-203ENST00000448450 TFCP2L1Q9NZI6 479 aa34.07■■■■□ 3.04
HTATSF1-203ENST00000448450 MEGF6O75095 1541 aa34.07■■■■□ 3.04
HTATSF1-203ENST00000448450 GOLGB1Q14789 3259 aaKnown RBP34.06■■■■□ 3.04
HTATSF1-203ENST00000448450 ZCRB1Q8TBF4 217 aaKnown RBP34.06■■■■□ 3.04
HTATSF1-203ENST00000448450 KLHL34Q8N239 644 aa34.05■■■■□ 3.04
HTATSF1-203ENST00000448450 RAPGEF4Q8WZA2 1011 aa34.05■■■■□ 3.04
HTATSF1-203ENST00000448450 EIF4A2Q14240 407 aaKnown RBP34.03■■■■□ 3.04
HTATSF1-203ENST00000448450 GPR162Q16538 588 aa34.03■■■■□ 3.04
HTATSF1-203ENST00000448450 KCNQ4P56696 695 aa34.02■■■■□ 3.04
HTATSF1-203ENST00000448450 EYA1Q99502 592 aa34.02■■■■□ 3.04
HTATSF1-203ENST00000448450 TATP17735 454 aaPredicted RBP34.01■■■■□ 3.03
HTATSF1-203ENST00000448450 CCNL1Q9UK58 526 aaPredicted RBP33.99■■■■□ 3.03
HTATSF1-203ENST00000448450 ZEB1P37275 1124 aaPredicted RBP33.95■■■■□ 3.03
HTATSF1-203ENST00000448450 MTHFSP49914 203 aa33.95■■■■□ 3.03
HTATSF1-203ENST00000448450 NPC1L1Q9UHC9 1359 aa33.95■■■■□ 3.02
HTATSF1-203ENST00000448450 PELP1Q8IZL8 1130 aaKnown RBP33.93■■■■□ 3.02
HTATSF1-203ENST00000448450 C5P01031 1676 aa33.91■■■■□ 3.02
HTATSF1-203ENST00000448450 MSH5O43196 834 aa33.9■■■■□ 3.02
HTATSF1-203ENST00000448450 NCAPD2Q15021 1401 aa33.89■■■■□ 3.02
HTATSF1-203ENST00000448450 PCDH11XQ9BZA7 1347 aa33.88■■■■□ 3.01
HTATSF1-203ENST00000448450 PCDH11YQ9BZA8 1340 aa33.88■■■■□ 3.01
HTATSF1-203ENST00000448450 NLGN2Q8NFZ4 835 aa33.88■■■■□ 3.01
HTATSF1-203ENST00000448450 C1QTNF8P60827 252 aa33.87■■■■□ 3.01
HTATSF1-203ENST00000448450 IGSF1Q8N6C5 1336 aa33.85■■■■□ 3.01
HTATSF1-203ENST00000448450 HMGB2P26583 209 aaKnown RBP33.85■■■■□ 3.01
HTATSF1-203ENST00000448450 COL23A1Q86Y22 540 aaPredicted RBP33.85■■■■□ 3.01
HTATSF1-203ENST00000448450 SENP3-EIF4A1A0A087X0R7 540 aa33.84■■■■□ 3.01
HTATSF1-203ENST00000448450 IL13P35225 146 aa33.84■■■■□ 3.01
HTATSF1-203ENST00000448450 TAF1LQ8IZX4 1826 aa33.83■■■■□ 3.01
HTATSF1-203ENST00000448450 CYP27B1O15528 508 aa33.82■■■■□ 3
HTATSF1-203ENST00000448450 SPG7Q9UQ90 795 aa33.82■■■■□ 3
HTATSF1-203ENST00000448450 AEBP1Q8IUX7 1158 aa33.81■■■■□ 3
HTATSF1-203ENST00000448450 PALLDQ8WX93 1383 aa33.81■■■■□ 3
HTATSF1-203ENST00000448450 PKD1L3Q7Z443 1732 aa33.79■■■■□ 3
HTATSF1-203ENST00000448450 DDX10Q13206 875 aaKnown RBP33.79■■■■□ 3
HTATSF1-203ENST00000448450 SULT6B1Q6IMI4 303 aa33.79■■■■□ 3
HTATSF1-203ENST00000448450 ITGB4P16144 1822 aa33.79■■■■□ 3
HTATSF1-203ENST00000448450 TOGARAM1Q9Y4F4 1720 aa33.79■■■■□ 3
HTATSF1-203ENST00000448450 GRIN3BO60391 1043 aa33.78■■■■□ 3
HTATSF1-203ENST00000448450 GIGYF1O75420 1035 aaPredicted RBP33.78■■■■□ 3
HTATSF1-203ENST00000448450 MSL1Q68DK7 614 aa33.78■■■■□ 3
HTATSF1-203ENST00000448450 DIAPH1O60610 1272 aaKnown RBP33.77■■■■□ 3
HTATSF1-203ENST00000448450 MPRIPQ6WCQ1 1025 aa33.77■■■■□ 3
HTATSF1-203ENST00000448450 FLAD1Q8NFF5 587 aa33.77■■■■□ 3
HTATSF1-203ENST00000448450 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.76■■■□□ 2.993e-17■■■■■ 72.3
HTATSF1-203ENST00000448450 C4BP0C0L5 1744 aa33.75■■■□□ 2.99
HTATSF1-203ENST00000448450 YBX3P16989 372 aaKnown RBP eCLIP33.74■■■□□ 2.99
HTATSF1-203ENST00000448450 PPP2R1AP30153 589 aa33.73■■■□□ 2.99
HTATSF1-203ENST00000448450 SMARCC1Q92922 1105 aaPredicted RBP33.72■■■□□ 2.99
HTATSF1-203ENST00000448450 HMOX1P09601 288 aa33.71■■■□□ 2.99
HTATSF1-203ENST00000448450 PLEKHO1Q53GL0 409 aaPredicted RBP33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms