RNA–Protein interactions for RNA: ENST00000448141.6

CCHCR1-206, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-206ENST00000448141 PKD1L3Q7Z443 1732 aa27.79■■■□□ 2.04
CCHCR1-206ENST00000448141 BAG6P46379 1132 aa27.78■■■□□ 2.04
CCHCR1-206ENST00000448141 IL13P35225 146 aa27.77■■■□□ 2.04
CCHCR1-206ENST00000448141 NHSQ6T4R5 1651 aa27.76■■■□□ 2.03
CCHCR1-206ENST00000448141 APBA3O96018 575 aa27.76■■■□□ 2.03
CCHCR1-206ENST00000448141 PTF1AQ7RTS3 328 aa27.75■■■□□ 2.03
CCHCR1-206ENST00000448141 PPP2R1AP30153 589 aa27.74■■■□□ 2.03
CCHCR1-206ENST00000448141 EN1Q05925 392 aaPredicted RBP27.74■■■□□ 2.03
CCHCR1-206ENST00000448141 COL3A1P02461 1466 aaPredicted RBP27.74■■■□□ 2.03
CCHCR1-206ENST00000448141 DOT1LQ8TEK3 1739 aa27.73■■■□□ 2.03
CCHCR1-206ENST00000448141 ACSBG1Q96GR2 724 aa27.73■■■□□ 2.03
CCHCR1-206ENST00000448141 BCL11BQ9C0K0 894 aaPredicted RBP27.73■■■□□ 2.03
CCHCR1-206ENST00000448141 DIAPH1O60610 1272 aaKnown RBP27.72■■■□□ 2.03
CCHCR1-206ENST00000448141 AEBP1Q8IUX7 1158 aa27.72■■■□□ 2.03
CCHCR1-206ENST00000448141 KAT6BQ8WYB5 2073 aa27.72■■■□□ 2.03
CCHCR1-206ENST00000448141 PARD3Q8TEW0 1356 aa27.72■■■□□ 2.03
CCHCR1-206ENST00000448141 PCDH11XQ9BZA7 1347 aa27.71■■■□□ 2.03
CCHCR1-206ENST00000448141 PCDH11YQ9BZA8 1340 aa27.71■■■□□ 2.03
CCHCR1-206ENST00000448141 KCNQ2O43526 872 aa27.7■■■□□ 2.02
CCHCR1-206ENST00000448141 SULT6B1Q6IMI4 303 aa27.7■■■□□ 2.02
CCHCR1-206ENST00000448141 SPG7Q9UQ90 795 aa27.7■■■□□ 2.02
CCHCR1-206ENST00000448141 ZNF316A6NFI3 1004 aaPredicted RBP27.68■■■□□ 2.02
CCHCR1-206ENST00000448141 CYP27B1O15528 508 aa27.68■■■□□ 2.02
CCHCR1-206ENST00000448141 EZH2Q15910 746 aaKnown RBP27.68■■■□□ 2.02
CCHCR1-206ENST00000448141 CFAP53Q96M91 514 aa27.68■■■□□ 2.02
CCHCR1-206ENST00000448141 BTAF1O14981 1849 aa27.68■■■□□ 2.02
CCHCR1-206ENST00000448141 CAMKK2Q96RR4 588 aa27.67■■■□□ 2.02
CCHCR1-206ENST00000448141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.67■■■□□ 2.02
CCHCR1-206ENST00000448141 KDRP35968 1356 aa27.67■■■□□ 2.02
CCHCR1-206ENST00000448141 RGPD3A6NKT7 1758 aaPredicted RBP27.67■■■□□ 2.02
CCHCR1-206ENST00000448141 RGPD4Q7Z3J3 1758 aa27.67■■■□□ 2.02
CCHCR1-206ENST00000448141 RREB1Q92766 1687 aa27.65■■■□□ 2.02
CCHCR1-206ENST00000448141 PLEKHG2Q9H7P9 1386 aa27.65■■■□□ 2.02
CCHCR1-206ENST00000448141 HMOX1P09601 288 aa27.64■■■□□ 2.02
CCHCR1-206ENST00000448141 U2SURPO15042 1029 aaKnown RBP27.63■■■□□ 2.01
CCHCR1-206ENST00000448141 TOGARAM1Q9Y4F4 1720 aa27.63■■■□□ 2.01
CCHCR1-206ENST00000448141 SYTL4Q96C24 671 aaPredicted RBP27.62■■■□□ 2.01
CCHCR1-206ENST00000448141 PRIM1P49642 420 aaKnown RBP27.61■■■□□ 2.01
CCHCR1-206ENST00000448141 RALBP1Q15311 655 aa27.61■■■□□ 2.01
CCHCR1-206ENST00000448141 PLEKHO1Q53GL0 409 aaPredicted RBP27.61■■■□□ 2.01
CCHCR1-206ENST00000448141 NUP188Q5SRE5 1749 aa27.61■■■□□ 2.01
CCHCR1-206ENST00000448141 PLSCR1O15162 318 aa27.6■■■□□ 2.01
CCHCR1-206ENST00000448141 PHKG2P15735 406 aa27.59■■■□□ 2.01
CCHCR1-206ENST00000448141 IFNL2Q8IZJ0 200 aa27.59■■■□□ 2.01
CCHCR1-206ENST00000448141 ITGB4P16144 1822 aa27.59■■■□□ 2.01
CCHCR1-206ENST00000448141 NKX1-1Q15270 411 aaPredicted RBP27.58■■■□□ 2.01
CCHCR1-206ENST00000448141 AMOTQ4VCS5 1084 aa27.58■■■□□ 2.01
CCHCR1-206ENST00000448141 ZNF530Q6P9A1 599 aaPredicted RBP27.57■■■□□ 2
CCHCR1-206ENST00000448141 NUDCQ9Y266 331 aa27.55■■■□□ 2
CCHCR1-206ENST00000448141 PROM2Q8N271 834 aa27.52■■■□□ 2
CCHCR1-206ENST00000448141 MYBBP1AQ9BQG0 1328 aaKnown RBP27.51■■□□□ 1.99
CCHCR1-206ENST00000448141 C1orf141Q5JVX7 400 aa27.51■■□□□ 1.99
CCHCR1-206ENST00000448141 MPRIPQ6WCQ1 1025 aa27.51■■□□□ 1.99
CCHCR1-206ENST00000448141 U2AF1L5P0DN76 240 aaPredicted RBP27.5■■□□□ 1.99
CCHCR1-206ENST00000448141 U2AF1Q01081 240 aaKnown RBP eCLIP27.5■■□□□ 1.99
CCHCR1-206ENST00000448141 TXNRD1Q16881 649 aa27.5■■□□□ 1.99
CCHCR1-206ENST00000448141 HSP90AB1P08238 724 aaKnown RBP27.49■■□□□ 1.99
CCHCR1-206ENST00000448141 PRKRIP1Q9H875 184 aaPredicted RBP27.49■■□□□ 1.99
CCHCR1-206ENST00000448141 LY75O60449 1722 aa27.49■■□□□ 1.99
CCHCR1-206ENST00000448141 DCAF5Q96JK2 942 aa27.48■■□□□ 1.99
CCHCR1-206ENST00000448141 RSPH6AQ9H0K4 717 aa27.47■■□□□ 1.99
CCHCR1-206ENST00000448141 KDM6AO15550 1401 aaPredicted RBP27.47■■□□□ 1.99
CCHCR1-206ENST00000448141 VIRMAQ69YN4 1812 aaKnown RBP27.46■■□□□ 1.99
CCHCR1-206ENST00000448141 SCN11AQ9UI33 1791 aa27.46■■□□□ 1.99
CCHCR1-206ENST00000448141 PRKAR2BP31323 418 aa27.46■■□□□ 1.99
CCHCR1-206ENST00000448141 MTHFSDQ2M296 383 aaKnown RBP27.46■■□□□ 1.99
CCHCR1-206ENST00000448141 PSDA5PKW4 1024 aaPredicted RBP27.45■■□□□ 1.98
CCHCR1-206ENST00000448141 PIGBQ92521 554 aa27.45■■□□□ 1.98
CCHCR1-206ENST00000448141 TMOD3Q9NYL9 352 aa27.45■■□□□ 1.98
CCHCR1-206ENST00000448141 AKAP4Q5JQC9 854 aa27.44■■□□□ 1.98
CCHCR1-206ENST00000448141 NBPF14Q5TI25 921 aa27.44■■□□□ 1.98
CCHCR1-206ENST00000448141 R3HDM1Q15032 1099 aaKnown RBP27.43■■□□□ 1.98
CCHCR1-206ENST00000448141 ERVV-2B6SEH9 535 aa27.42■■□□□ 1.98
CCHCR1-206ENST00000448141 PHACTR3Q96KR7 559 aa27.42■■□□□ 1.98
CCHCR1-206ENST00000448141 FCHSD2O94868 740 aa27.41■■□□□ 1.98
CCHCR1-206ENST00000448141 ANO8Q9HCE9 1232 aaPredicted RBP27.4■■□□□ 1.98
CCHCR1-206ENST00000448141 LRRC4BQ9NT99 713 aa27.4■■□□□ 1.98
CCHCR1-206ENST00000448141 PAPPAQ13219 1627 aa27.4■■□□□ 1.98
CCHCR1-206ENST00000448141 PALLDQ8WX93 1383 aa27.39■■□□□ 1.98
CCHCR1-206ENST00000448141 SLC27A3Q5K4L6 730 aa27.39■■□□□ 1.98
CCHCR1-206ENST00000448141 ADAMTS7Q9UKP4 1686 aa27.38■■□□□ 1.97
CCHCR1-206ENST00000448141 KCNQ4P56696 695 aa27.38■■□□□ 1.97
CCHCR1-206ENST00000448141 CABP4P57796 275 aa27.38■■□□□ 1.97
CCHCR1-206ENST00000448141 GAS2L2Q8NHY3 880 aa27.38■■□□□ 1.97
CCHCR1-206ENST00000448141 SMARCC1Q92922 1105 aaPredicted RBP27.38■■□□□ 1.97
CCHCR1-206ENST00000448141 LGR6Q9HBX8 967 aa27.37■■□□□ 1.97
CCHCR1-206ENST00000448141 CCNL1Q9UK58 526 aaPredicted RBP27.37■■□□□ 1.97
CCHCR1-206ENST00000448141 ASAP1Q9ULH1 1129 aa27.36■■□□□ 1.97
CCHCR1-206ENST00000448141 MAP3K5Q99683 1374 aa27.35■■□□□ 1.97
CCHCR1-206ENST00000448141 RNMTO43148 476 aaKnown RBP27.35■■□□□ 1.97
CCHCR1-206ENST00000448141 NFATC2IPQ8NCF5 419 aa27.34■■□□□ 1.97
CCHCR1-206ENST00000448141 ATG3Q9NT62 314 aa27.34■■□□□ 1.97
CCHCR1-206ENST00000448141 STK32BQ9NY57 414 aa27.34■■□□□ 1.97
CCHCR1-206ENST00000448141 C5P01031 1676 aa27.33■■□□□ 1.97
CCHCR1-206ENST00000448141 TAF1LQ8IZX4 1826 aa27.33■■□□□ 1.97
CCHCR1-206ENST00000448141 GNAT3A8MTJ3 354 aa27.33■■□□□ 1.97
CCHCR1-206ENST00000448141 MRC1P22897 1456 aa27.32■■□□□ 1.96
CCHCR1-206ENST00000448141 SLC15A2Q16348 729 aa27.31■■□□□ 1.96
CCHCR1-206ENST00000448141 NEFMP07197 916 aa27.3■■□□□ 1.96
CCHCR1-206ENST00000448141 PLEKHF1Q96S99 279 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms