RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 PRG4Q92954 1404 aaPredicted RBP13.01□□□□□ -0.33
SMARCE1-206ENST00000447024 RAPGEF2Q9Y4G8 1499 aa13□□□□□ -0.33
SMARCE1-206ENST00000447024 Q6ZVU0 165 aa13□□□□□ -0.33
SMARCE1-206ENST00000447024 KCTD15Q96SI1 283 aaPredicted RBP13□□□□□ -0.33
SMARCE1-206ENST00000447024 PTSQ03393 145 aa12.98□□□□□ -0.33
SMARCE1-206ENST00000447024 NR6A1Q15406 480 aa12.98□□□□□ -0.33
SMARCE1-206ENST00000447024 CDV3Q9UKY7 258 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-206ENST00000447024 EEA1Q15075 1411 aa12.97□□□□□ -0.33
SMARCE1-206ENST00000447024 FIGNL2A6NMB9 653 aa12.97□□□□□ -0.33
SMARCE1-206ENST00000447024 SPINT1O43278 529 aa12.97□□□□□ -0.33
SMARCE1-206ENST00000447024 SKIV2LQ15477 1246 aaKnown RBP12.97□□□□□ -0.33
SMARCE1-206ENST00000447024 ZBTB33Q86T24 672 aa12.97□□□□□ -0.33
SMARCE1-206ENST00000447024 ZC3H4Q9UPT8 1303 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-206ENST00000447024 ERCC6L2Q5T890 1561 aa12.96□□□□□ -0.33
SMARCE1-206ENST00000447024 KRT76Q01546 638 aa12.96□□□□□ -0.33
SMARCE1-206ENST00000447024 GPR161Q8N6U8 529 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-206ENST00000447024 SH3D19Q5HYK7 790 aa12.95□□□□□ -0.34
SMARCE1-206ENST00000447024 OCSTAMPQ9BR26 566 aa12.95□□□□□ -0.34
SMARCE1-206ENST00000447024 PRXQ9BXM0 1461 aa12.94□□□□□ -0.34
SMARCE1-206ENST00000447024 DHX9Q08211 1270 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-206ENST00000447024 INTS6LQ5JSJ4 861 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-206ENST00000447024 PROCA1Q8NCQ7 364 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-206ENST00000447024 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMARCE1-206ENST00000447024 CARMIL2Q6F5E8 1435 aa12.94□□□□□ -0.34
SMARCE1-206ENST00000447024 IQGAP2Q13576 1575 aa12.94□□□□□ -0.34
SMARCE1-206ENST00000447024 PPP2R2DQ66LE6 453 aa12.93□□□□□ -0.34
SMARCE1-206ENST00000447024 AGBL1Q96MI9 1066 aa12.92□□□□□ -0.34
SMARCE1-206ENST00000447024 CNTNAP3BQ96NU0 1288 aa12.92□□□□□ -0.34
SMARCE1-206ENST00000447024 CNTNAP3Q9BZ76 1288 aa12.92□□□□□ -0.34
SMARCE1-206ENST00000447024 GPBP1L1Q9HC44 474 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-206ENST00000447024 PTK2Q05397 1052 aa12.91□□□□□ -0.34
SMARCE1-206ENST00000447024 CCDC155Q8N6L0 562 aa12.91□□□□□ -0.34
SMARCE1-206ENST00000447024 ADAM32Q8TC27 787 aa12.9□□□□□ -0.34
SMARCE1-206ENST00000447024 KDM4CQ9H3R0 1056 aa12.9□□□□□ -0.34
SMARCE1-206ENST00000447024 UGGT2Q9NYU1 1516 aa12.89□□□□□ -0.35
SMARCE1-206ENST00000447024 CTSOP43234 321 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-206ENST00000447024 NANOS1Q8WY41 292 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-206ENST00000447024 FAM117AQ9C073 453 aa12.89□□□□□ -0.35
SMARCE1-206ENST00000447024 GPSM3Q9Y4H4 160 aa12.89□□□□□ -0.35
SMARCE1-206ENST00000447024 TNIKQ9UKE5 1360 aa12.89□□□□□ -0.35
SMARCE1-206ENST00000447024 SLC35F4A4IF30 521 aa12.88□□□□□ -0.35
SMARCE1-206ENST00000447024 AP1G2O75843 785 aa12.88□□□□□ -0.35
SMARCE1-206ENST00000447024 RELBQ01201 579 aa12.88□□□□□ -0.35
SMARCE1-206ENST00000447024 DDRGK1Q96HY6 314 aa12.88□□□□□ -0.35
SMARCE1-206ENST00000447024 COL25A1Q9BXS0 654 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-206ENST00000447024 ATP1B4Q9UN42 357 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-206ENST00000447024 PTPRGP23470 1445 aa12.88□□□□□ -0.35
SMARCE1-206ENST00000447024 KCNMA1Q12791 1236 aa12.87□□□□□ -0.35
SMARCE1-206ENST00000447024 EPS8L1Q8TE68 723 aa12.87□□□□□ -0.35
SMARCE1-206ENST00000447024 INSM2Q96T92 566 aaPredicted RBP12.87□□□□□ -0.35
SMARCE1-206ENST00000447024 TMPRSS4Q9NRS4 437 aa12.86□□□□□ -0.35
SMARCE1-206ENST00000447024 GSK3AP49840 483 aa12.85□□□□□ -0.35
SMARCE1-206ENST00000447024 NBPF20Q3BBV1 942 aa12.85□□□□□ -0.35
SMARCE1-206ENST00000447024 HMX1Q9NP08 348 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-206ENST00000447024 GOLGA3Q08378 1498 aa12.85□□□□□ -0.35
SMARCE1-206ENST00000447024 CTTNBP2Q8WZ74 1663 aa12.84□□□□□ -0.35
SMARCE1-206ENST00000447024 RNFT1Q5M7Z0 435 aa12.84□□□□□ -0.35
SMARCE1-206ENST00000447024 POLMQ9NP87 494 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-206ENST00000447024 DISP1Q96F81 1524 aa12.83□□□□□ -0.35
SMARCE1-206ENST00000447024 ITGA6P23229 1130 aa12.83□□□□□ -0.36
SMARCE1-206ENST00000447024 RAB15P59190 212 aa12.83□□□□□ -0.36
SMARCE1-206ENST00000447024 ZNF784Q8NCA9 323 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-206ENST00000447024 ZNF395Q9H8N7 513 aaPredicted RBP12.83□□□□□ -0.36
SMARCE1-206ENST00000447024 USP17L8P0C7I0 530 aa12.82□□□□□ -0.36
SMARCE1-206ENST00000447024 RNF217Q8TC41 542 aa12.82□□□□□ -0.36
SMARCE1-206ENST00000447024 UHRF1BP1LA0JNW5 1464 aa12.81□□□□□ -0.36
SMARCE1-206ENST00000447024 MAPKBP1O60336 1514 aa12.81□□□□□ -0.36
SMARCE1-206ENST00000447024 CDC14CA4D256 554 aa12.8□□□□□ -0.36
SMARCE1-206ENST00000447024 ADH1AP07327 375 aa12.8□□□□□ -0.36
SMARCE1-206ENST00000447024 FAM9AQ8IZU1 332 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-206ENST00000447024 VWA5B2Q8N398 1253 aa12.8□□□□□ -0.36
SMARCE1-206ENST00000447024 PNMA1Q8ND90 353 aa12.8□□□□□ -0.36
SMARCE1-206ENST00000447024 ADAMTS8Q9UP79 889 aa12.8□□□□□ -0.36
SMARCE1-206ENST00000447024 KIAA0556O60303 1618 aa12.8□□□□□ -0.36
SMARCE1-206ENST00000447024 ADCY10Q96PN6 1610 aa12.8□□□□□ -0.36
SMARCE1-206ENST00000447024 ZNF385CQ66K41 422 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-206ENST00000447024 DZIP3Q86Y13 1208 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-206ENST00000447024 UACAQ9BZF9 1416 aa12.79□□□□□ -0.36
SMARCE1-206ENST00000447024 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
SMARCE1-206ENST00000447024 ERVH48-1M5A8F1 160 aa12.78□□□□□ -0.36
SMARCE1-206ENST00000447024 LILRA1O75019 489 aa12.78□□□□□ -0.36
SMARCE1-206ENST00000447024 FOXD4L5Q5VV16 416 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-206ENST00000447024 SV2AQ7L0J3 742 aa12.78□□□□□ -0.36
SMARCE1-206ENST00000447024 ABCC2Q92887 1545 aa12.78□□□□□ -0.36
SMARCE1-206ENST00000447024 ADD1P35611 737 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-206ENST00000447024 KCTD17Q8N5Z5 321 aa12.77□□□□□ -0.37
SMARCE1-206ENST00000447024 ESPNB1AK53 854 aa12.76□□□□□ -0.37
SMARCE1-206ENST00000447024 SVOPQ8N4V2 548 aa12.76□□□□□ -0.37
SMARCE1-206ENST00000447024 KDF1Q8NAX2 398 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-206ENST00000447024 KIF21BO75037 1637 aa12.76□□□□□ -0.37
SMARCE1-206ENST00000447024 RFC5P40937 340 aa12.75□□□□□ -0.37
SMARCE1-206ENST00000447024 ABCC10Q5T3U5 1492 aa12.75□□□□□ -0.37
SMARCE1-206ENST00000447024 RNF225M0QZC1 329 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-206ENST00000447024 SLURP2P0DP57 97 aa12.74□□□□□ -0.37
SMARCE1-206ENST00000447024 PTGIRP43119 386 aa12.74□□□□□ -0.37
SMARCE1-206ENST00000447024 WHAMMQ8TF30 809 aa12.74□□□□□ -0.37
SMARCE1-206ENST00000447024 PLB1Q6P1J6 1458 aa12.73□□□□□ -0.37
SMARCE1-206ENST00000447024 RASSF7Q02833 373 aa12.73□□□□□ -0.37
SMARCE1-206ENST00000447024 TMEM151AQ8N4L1 468 aa12.73□□□□□ -0.37
SMARCE1-206ENST00000447024 KDM5BQ9UGL1 1544 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms