RNA–Protein interactions for RNA: ENST00000444664.5

SHC1-209, Transcript of SHC adaptor protein 1, humanhuman

TSL 5

Gene SHC1, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-209ENST00000444664 DDX54Q8TDD1 881 aaKnown RBP22.74■■□□□ 1.23
SHC1-209ENST00000444664 NHSQ6T4R5 1651 aa22.74■■□□□ 1.23
SHC1-209ENST00000444664 EN1Q05925 392 aaPredicted RBP22.73■■□□□ 1.23
SHC1-209ENST00000444664 ZCRB1Q8TBF4 217 aaKnown RBP22.73■■□□□ 1.23
SHC1-209ENST00000444664 IGSF1Q8N6C5 1336 aa22.72■■□□□ 1.23
SHC1-209ENST00000444664 APBA3O96018 575 aa22.72■■□□□ 1.23
SHC1-209ENST00000444664 DOT1LQ8TEK3 1739 aa22.71■■□□□ 1.23
SHC1-209ENST00000444664 DDX10Q13206 875 aaKnown RBP22.7■■□□□ 1.22
SHC1-209ENST00000444664 ACSBG1Q96GR2 724 aa22.7■■□□□ 1.22
SHC1-209ENST00000444664 IL13P35225 146 aa22.69■■□□□ 1.22
SHC1-209ENST00000444664 KCNQ2O43526 872 aa22.68■■□□□ 1.22
SHC1-209ENST00000444664 EZH2Q15910 746 aaKnown RBP22.68■■□□□ 1.22
SHC1-209ENST00000444664 BCL11BQ9C0K0 894 aaPredicted RBP22.68■■□□□ 1.22
SHC1-209ENST00000444664 RREB1Q92766 1687 aa22.68■■□□□ 1.22
SHC1-209ENST00000444664 BTAF1O14981 1849 aa22.68■■□□□ 1.22
SHC1-209ENST00000444664 COL3A1P02461 1466 aaPredicted RBP22.67■■□□□ 1.22
SHC1-209ENST00000444664 CAMKK2Q96RR4 588 aa22.67■■□□□ 1.22
SHC1-209ENST00000444664 RGPD3A6NKT7 1758 aaPredicted RBP22.66■■□□□ 1.22
SHC1-209ENST00000444664 RGPD4Q7Z3J3 1758 aa22.66■■□□□ 1.22
SHC1-209ENST00000444664 AEBP1Q8IUX7 1158 aa22.66■■□□□ 1.22
SHC1-209ENST00000444664 PCDH11XQ9BZA7 1347 aa22.66■■□□□ 1.22
SHC1-209ENST00000444664 PCDH11YQ9BZA8 1340 aa22.66■■□□□ 1.22
SHC1-209ENST00000444664 NUP188Q5SRE5 1749 aa22.65■■□□□ 1.22
SHC1-209ENST00000444664 PPP2R1AP30153 589 aa22.64■■□□□ 1.22
SHC1-209ENST00000444664 CYP27B1O15528 508 aa22.63■■□□□ 1.21
SHC1-209ENST00000444664 TOGARAM1Q9Y4F4 1720 aa22.62■■□□□ 1.21
SHC1-209ENST00000444664 DIAPH1O60610 1272 aaKnown RBP22.62■■□□□ 1.21
SHC1-209ENST00000444664 SULT6B1Q6IMI4 303 aa22.62■■□□□ 1.21
SHC1-209ENST00000444664 SPG7Q9UQ90 795 aa22.62■■□□□ 1.21
SHC1-209ENST00000444664 PARD3Q8TEW0 1356 aa22.62■■□□□ 1.21
SHC1-209ENST00000444664 KDRP35968 1356 aa22.61■■□□□ 1.21
SHC1-209ENST00000444664 ITGB4P16144 1822 aa22.6■■□□□ 1.21
SHC1-209ENST00000444664 PLSCR1O15162 318 aa22.59■■□□□ 1.21
SHC1-209ENST00000444664 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.59■■□□□ 1.219e-6■□□□□ 9.4
SHC1-209ENST00000444664 PRIM1P49642 420 aaKnown RBP22.58■■□□□ 1.21
SHC1-209ENST00000444664 SYTL4Q96C24 671 aaPredicted RBP22.58■■□□□ 1.21
SHC1-209ENST00000444664 PLEKHG2Q9H7P9 1386 aa22.58■■□□□ 1.21
SHC1-209ENST00000444664 HMOX1P09601 288 aa22.57■■□□□ 1.2
SHC1-209ENST00000444664 CFAP53Q96M91 514 aa22.57■■□□□ 1.2
SHC1-209ENST00000444664 PHKG2P15735 406 aa22.56■■□□□ 1.2
SHC1-209ENST00000444664 U2SURPO15042 1029 aaKnown RBP22.55■■□□□ 1.2
SHC1-209ENST00000444664 PLEKHO1Q53GL0 409 aaPredicted RBP22.55■■□□□ 1.2
SHC1-209ENST00000444664 IFNL2Q8IZJ0 200 aa22.55■■□□□ 1.2
SHC1-209ENST00000444664 NKX1-1Q15270 411 aaPredicted RBP22.54■■□□□ 1.2
SHC1-209ENST00000444664 PROM2Q8N271 834 aa22.54■■□□□ 1.2
SHC1-209ENST00000444664 ZNF316A6NFI3 1004 aaPredicted RBP22.53■■□□□ 1.2
SHC1-209ENST00000444664 ZNF530Q6P9A1 599 aaPredicted RBP22.53■■□□□ 1.2
SHC1-209ENST00000444664 PSDA5PKW4 1024 aaPredicted RBP22.52■■□□□ 1.2
SHC1-209ENST00000444664 TXNRD1Q16881 649 aa22.52■■□□□ 1.2
SHC1-209ENST00000444664 AMOTQ4VCS5 1084 aa22.52■■□□□ 1.2
SHC1-209ENST00000444664 LY75O60449 1722 aa22.51■■□□□ 1.19
SHC1-209ENST00000444664 VIRMAQ69YN4 1812 aaKnown RBP22.51■■□□□ 1.19
SHC1-209ENST00000444664 RALBP1Q15311 655 aa22.5■■□□□ 1.19
SHC1-209ENST00000444664 MPRIPQ6WCQ1 1025 aa22.49■■□□□ 1.19
SHC1-209ENST00000444664 KDM6AO15550 1401 aaPredicted RBP22.48■■□□□ 1.19
SHC1-209ENST00000444664 R3HDM1Q15032 1099 aaKnown RBP22.48■■□□□ 1.19
SHC1-209ENST00000444664 SCN11AQ9UI33 1791 aa22.47■■□□□ 1.19
SHC1-209ENST00000444664 NUDCQ9Y266 331 aa22.47■■□□□ 1.19
SHC1-209ENST00000444664 PAPPAQ13219 1627 aa22.46■■□□□ 1.19
SHC1-209ENST00000444664 C1orf141Q5JVX7 400 aa22.46■■□□□ 1.19
SHC1-209ENST00000444664 ANO8Q9HCE9 1232 aaPredicted RBP22.46■■□□□ 1.19
SHC1-209ENST00000444664 MTHFSDQ2M296 383 aaKnown RBP22.45■■□□□ 1.18
SHC1-209ENST00000444664 NBPF14Q5TI25 921 aa22.45■■□□□ 1.18
SHC1-209ENST00000444664 PIGBQ92521 554 aa22.45■■□□□ 1.18
SHC1-209ENST00000444664 HSP90AB1P08238 724 aaKnown RBP22.44■■□□□ 1.18
SHC1-209ENST00000444664 U2AF1L5P0DN76 240 aaPredicted RBP22.44■■□□□ 1.18
SHC1-209ENST00000444664 U2AF1Q01081 240 aaKnown RBP eCLIP22.44■■□□□ 1.18
SHC1-209ENST00000444664 DCAF5Q96JK2 942 aa22.44■■□□□ 1.18
SHC1-209ENST00000444664 RSPH6AQ9H0K4 717 aa22.44■■□□□ 1.18
SHC1-209ENST00000444664 LRRC4BQ9NT99 713 aa22.44■■□□□ 1.18
SHC1-209ENST00000444664 MYBBP1AQ9BQG0 1328 aaKnown RBP22.44■■□□□ 1.18
SHC1-209ENST00000444664 KCNQ4P56696 695 aa22.43■■□□□ 1.18
SHC1-209ENST00000444664 TMOD3Q9NYL9 352 aa22.43■■□□□ 1.18
SHC1-209ENST00000444664 PRKAR2BP31323 418 aa22.42■■□□□ 1.18
SHC1-209ENST00000444664 PALLDQ8WX93 1383 aa22.41■■□□□ 1.18
SHC1-209ENST00000444664 AKAP4Q5JQC9 854 aa22.41■■□□□ 1.18
SHC1-209ENST00000444664 ERVV-2B6SEH9 535 aa22.4■■□□□ 1.18
SHC1-209ENST00000444664 PRKRIP1Q9H875 184 aaPredicted RBP22.4■■□□□ 1.18
SHC1-209ENST00000444664 TAF1LQ8IZX4 1826 aa22.4■■□□□ 1.18
SHC1-209ENST00000444664 ADAMTS7Q9UKP4 1686 aa22.4■■□□□ 1.18
SHC1-209ENST00000444664 SLC27A3Q5K4L6 730 aa22.39■■□□□ 1.18
SHC1-209ENST00000444664 PHACTR3Q96KR7 559 aa22.39■■□□□ 1.18
SHC1-209ENST00000444664 CCNL1Q9UK58 526 aaPredicted RBP22.39■■□□□ 1.18
SHC1-209ENST00000444664 C5P01031 1676 aa22.38■■□□□ 1.17
SHC1-209ENST00000444664 STK32BQ9NY57 414 aa22.38■■□□□ 1.17
SHC1-209ENST00000444664 ASAP1Q9ULH1 1129 aa22.38■■□□□ 1.17
SHC1-209ENST00000444664 SRCAPQ6ZRS2 3230 aa22.38■■□□□ 1.17
SHC1-209ENST00000444664 TUBGCP6Q96RT7 1819 aa22.38■■□□□ 1.17
SHC1-209ENST00000444664 SMARCC1Q92922 1105 aaPredicted RBP22.37■■□□□ 1.17
SHC1-209ENST00000444664 LGR6Q9HBX8 967 aa22.37■■□□□ 1.17
SHC1-209ENST00000444664 CASZ1Q86V15 1759 aa22.37■■□□□ 1.17
SHC1-209ENST00000444664 FCHSD2O94868 740 aa22.36■■□□□ 1.17
SHC1-209ENST00000444664 CABP4P57796 275 aa22.36■■□□□ 1.17
SHC1-209ENST00000444664 SLC15A2Q16348 729 aa22.36■■□□□ 1.17
SHC1-209ENST00000444664 ZNF827Q17R98 1081 aa22.36■■□□□ 1.17
SHC1-209ENST00000444664 GAS2L2Q8NHY3 880 aa22.36■■□□□ 1.17
SHC1-209ENST00000444664 ATG3Q9NT62 314 aa22.35■■□□□ 1.17
SHC1-209ENST00000444664 MAP3K5Q99683 1374 aa22.35■■□□□ 1.17
SHC1-209ENST00000444664 MRC1P22897 1456 aa22.35■■□□□ 1.17
SHC1-209ENST00000444664 RNMTO43148 476 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms