RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 PRM3Q9NNZ6 103 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 LDHAP00338 332 aaKnown RBP5.06□□□□□ -1.6
UBR3-206ENST00000444475 NDUFV2P19404 249 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 TMEM95Q3KNT9 176 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 PPP1R15BQ5SWA1 713 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 ATL2Q8NHH9 583 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 NOVA2Q9UNW9 492 aaKnown RBP5.06□□□□□ -1.6
UBR3-206ENST00000444475 CECR2Q9BXF3 1484 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 ATP9BO43861 1147 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 FGRP09769 529 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 ODR4Q5SWX8 454 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 MSL3Q8N5Y2 521 aaKnown RBP5.06□□□□□ -1.6
UBR3-206ENST00000444475 ZNF700Q9H0M5 742 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 CAPN10Q9HC96 672 aa5.06□□□□□ -1.6
UBR3-206ENST00000444475 NRDCO43847 1150 aa5.05□□□□□ -1.6
UBR3-206ENST00000444475 LMOD3Q0VAK6 560 aa5.05□□□□□ -1.6
UBR3-206ENST00000444475 ZNF69Q9UC07 566 aa5.05□□□□□ -1.6
UBR3-206ENST00000444475 FEZ2Q9UHY8 353 aaPredicted RBP5.05□□□□□ -1.6
UBR3-206ENST00000444475 ARMCX6Q7L4S7 300 aa5.05□□□□□ -1.6
UBR3-206ENST00000444475 EFCAB3Q8N7B9 438 aa5.05□□□□□ -1.6
UBR3-206ENST00000444475 RSPH9Q9H1X1 276 aaPredicted RBP5.05□□□□□ -1.6
UBR3-206ENST00000444475 LDHCP07864 332 aa5.05□□□□□ -1.6
UBR3-206ENST00000444475 SF3B2Q13435 895 aaKnown RBP5.05□□□□□ -1.6
UBR3-206ENST00000444475 OTUD6BQ8N6M0 293 aa5.05□□□□□ -1.6
UBR3-206ENST00000444475 TSR2Q969E8 191 aaKnown RBP5.05□□□□□ -1.6
UBR3-206ENST00000444475 RUNDC1Q96C34 613 aa5.05□□□□□ -1.6
UBR3-206ENST00000444475 EID1Q9Y6B2 187 aa5.05□□□□□ -1.6
UBR3-206ENST00000444475 ZNF710Q8N1W2 664 aa5.04□□□□□ -1.6
UBR3-206ENST00000444475 C12orf49Q9H741 205 aa5.04□□□□□ -1.6
UBR3-206ENST00000444475 TCEAL9Q9UHQ7 104 aa5.04□□□□□ -1.6
UBR3-206ENST00000444475 C1QTNF12Q5T7M4 302 aa5.04□□□□□ -1.6
UBR3-206ENST00000444475 NEUROD6Q96NK8 337 aa5.04□□□□□ -1.6
UBR3-206ENST00000444475 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.04□□□□□ -1.6
UBR3-206ENST00000444475 USP17L8P0C7I0 530 aa5.04□□□□□ -1.6
UBR3-206ENST00000444475 PTGER2P43116 358 aa5.04□□□□□ -1.6
UBR3-206ENST00000444475 ARHGAP4P98171 946 aa5.04□□□□□ -1.6
UBR3-206ENST00000444475 KCTD2Q14681 263 aa5.04□□□□□ -1.6
UBR3-206ENST00000444475 KRT77Q7Z794 578 aa5.04□□□□□ -1.6
UBR3-206ENST00000444475 IFT122Q9HBG6 1241 aa5.04□□□□□ -1.6
UBR3-206ENST00000444475 P4HBP07237 508 aaKnown RBP5.03□□□□□ -1.6
UBR3-206ENST00000444475 OSCARQ8IYS5 282 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 TTC30BQ8N4P2 665 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 CREBZFQ9NS37 354 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 BICDL2A1A5D9 508 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 SRGNP10124 158 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 TBC1D10BQ4KMP7 808 aaPredicted RBP5.03□□□□□ -1.6
UBR3-206ENST00000444475 CCDC174Q6PII3 467 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 USP48Q86UV5 1035 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 CREBRFQ8IUR6 639 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 DRC7Q8IY82 874 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 RGL4Q8IZJ4 473 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 ARPC5LQ9BPX5 153 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 ARNT2Q9HBZ2 717 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 BIN2Q9UBW5 565 aaPredicted RBP5.03□□□□□ -1.6
UBR3-206ENST00000444475 GOLIM4O00461 696 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 LILRB3O75022 631 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 NFE2Q16621 373 aaPredicted RBP5.03□□□□□ -1.6
UBR3-206ENST00000444475 TMX1Q9H3N1 280 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 GPHNQ9NQX3 736 aaPredicted RBP5.03□□□□□ -1.6
UBR3-206ENST00000444475 ANAPC4Q9UJX5 808 aa5.03□□□□□ -1.6
UBR3-206ENST00000444475 CC2D2AQ9P2K1 1620 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 EAPPQ56P03 285 aaPredicted RBP5.02□□□□□ -1.61
UBR3-206ENST00000444475 CCSER2Q9H7U1 834 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 AKAP2Q9Y2D5 859 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 UNC13AQ9UPW8 1703 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 FAM196BA6NMK8 535 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 HSP90AA1P07900 732 aaKnown RBP5.02□□□□□ -1.61
UBR3-206ENST00000444475 NFE2L2Q16236 605 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 QPCTQ16769 361 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 TAS1R3Q7RTX0 852 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 PPARGC1BQ86YN6 1023 aaKnown RBP5.02□□□□□ -1.61
UBR3-206ENST00000444475 RETREG1Q9H6L5 497 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 NPDC1Q9NQX5 325 aaPredicted RBP5.02□□□□□ -1.61
UBR3-206ENST00000444475 PUF60Q9UHX1 559 aaKnown RBP5.02□□□□□ -1.61
UBR3-206ENST00000444475 DCTN4Q9UJW0 460 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 DNAJA1P31689 397 aaKnown RBP5.02□□□□□ -1.61
UBR3-206ENST00000444475 CTHP32929 405 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 GLIPR1L2Q4G1C9 344 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 NGDNQ8NEJ9 315 aaKnown RBP5.02□□□□□ -1.61
UBR3-206ENST00000444475 STAC3Q96MF2 364 aa5.02□□□□□ -1.61
UBR3-206ENST00000444475 TMX4Q9H1E5 349 aaPredicted RBP5.02□□□□□ -1.61
UBR3-206ENST00000444475 HMX1Q9NP08 348 aaPredicted RBP5.02□□□□□ -1.61
UBR3-206ENST00000444475 CTDP1Q9Y5B0 961 aaPredicted RBP5.02□□□□□ -1.61
UBR3-206ENST00000444475 KIF3BO15066 747 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 POU3F3P20264 500 aaPredicted RBP5.01□□□□□ -1.61
UBR3-206ENST00000444475 PDE6BP35913 854 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 RIC3Q7Z5B4 369 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 CEP120Q8N960 986 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 SPTLC1O15269 473 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 ICMTO60725 284 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 NOS2P35228 1153 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 SOX11P35716 441 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 PSEN1P49768 467 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 SYCP2LQ5T4T6 812 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 RNF34Q969K3 372 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 SERINC2Q96SA4 455 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 CEP89Q96ST8 783 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 PCGF6Q9BYE7 350 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 LZTS1Q9Y250 596 aa5.01□□□□□ -1.61
UBR3-206ENST00000444475 CCDC163A0A0D9SF12 145 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms