RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 DIAPH1O60610 1272 aaKnown RBP14.59□□□□□ -0.07
HDAC6-211ENST00000443563 PPP2R1AP30153 589 aa14.59□□□□□ -0.07
HDAC6-211ENST00000443563 MARCH10Q8NA82 808 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-211ENST00000443563 SHANK3Q9BYB0 1731 aa14.58□□□□□ -0.07
HDAC6-211ENST00000443563 TNS1Q9HBL0 1735 aaKnown RBP14.58□□□□□ -0.07
HDAC6-211ENST00000443563 IL13P35225 146 aa14.58□□□□□ -0.08
HDAC6-211ENST00000443563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.57□□□□□ -0.081e-11■■□□□ 11.5
HDAC6-211ENST00000443563 SPG7Q9UQ90 795 aa14.57□□□□□ -0.08
HDAC6-211ENST00000443563 BAG6P46379 1132 aa14.56□□□□□ -0.08
HDAC6-211ENST00000443563 DDX54Q8TDD1 881 aaKnown RBP14.56□□□□□ -0.08
HDAC6-211ENST00000443563 PCDH11XQ9BZA7 1347 aa14.56□□□□□ -0.08
HDAC6-211ENST00000443563 PCDH11YQ9BZA8 1340 aa14.56□□□□□ -0.08
HDAC6-211ENST00000443563 COL3A1P02461 1466 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-211ENST00000443563 TRIM37O94972 964 aa14.55□□□□□ -0.08
HDAC6-211ENST00000443563 NUDCQ9Y266 331 aa14.55□□□□□ -0.08
HDAC6-211ENST00000443563 KDRP35968 1356 aa14.55□□□□□ -0.08
HDAC6-211ENST00000443563 NHSQ6T4R5 1651 aa14.55□□□□□ -0.08
HDAC6-211ENST00000443563 SULT6B1Q6IMI4 303 aa14.54□□□□□ -0.08
HDAC6-211ENST00000443563 AMOTQ4VCS5 1084 aa14.53□□□□□ -0.08
HDAC6-211ENST00000443563 PLEKHO1Q53GL0 409 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-211ENST00000443563 BCL11BQ9C0K0 894 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-211ENST00000443563 MYBBP1AQ9BQG0 1328 aaKnown RBP14.52□□□□□ -0.08
HDAC6-211ENST00000443563 U2SURPO15042 1029 aaKnown RBP14.52□□□□□ -0.09
HDAC6-211ENST00000443563 APBA3O96018 575 aa14.52□□□□□ -0.09
HDAC6-211ENST00000443563 RGPD3A6NKT7 1758 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-211ENST00000443563 RGPD4Q7Z3J3 1758 aa14.52□□□□□ -0.09
HDAC6-211ENST00000443563 DOT1LQ8TEK3 1739 aa14.52□□□□□ -0.09
HDAC6-211ENST00000443563 KAT6BQ8WYB5 2073 aa14.51□□□□□ -0.09
HDAC6-211ENST00000443563 IFNL2Q8IZJ0 200 aa14.51□□□□□ -0.09
HDAC6-211ENST00000443563 AEBP1Q8IUX7 1158 aa14.5□□□□□ -0.09
HDAC6-211ENST00000443563 CYP27B1O15528 508 aa14.49□□□□□ -0.09
HDAC6-211ENST00000443563 HSP90AB1P08238 724 aaKnown RBP14.49□□□□□ -0.09
HDAC6-211ENST00000443563 HMOX1P09601 288 aa14.49□□□□□ -0.09
HDAC6-211ENST00000443563 ACSBG1Q96GR2 724 aa14.49□□□□□ -0.09
HDAC6-211ENST00000443563 PRKRIP1Q9H875 184 aaPredicted RBP14.49□□□□□ -0.09
HDAC6-211ENST00000443563 BTAF1O14981 1849 aa14.48□□□□□ -0.09
HDAC6-211ENST00000443563 PLSCR1O15162 318 aa14.48□□□□□ -0.09
HDAC6-211ENST00000443563 PHKG2P15735 406 aa14.48□□□□□ -0.09
HDAC6-211ENST00000443563 NKX1-1Q15270 411 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-211ENST00000443563 C1orf141Q5JVX7 400 aa14.48□□□□□ -0.09
HDAC6-211ENST00000443563 DEFB132Q7Z7B7 95 aa14.48□□□□□ -0.09
HDAC6-211ENST00000443563 U2AF1L5P0DN76 240 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-211ENST00000443563 U2AF1Q01081 240 aaKnown RBP eCLIP14.47□□□□□ -0.09
HDAC6-211ENST00000443563 EN1Q05925 392 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-211ENST00000443563 ZNF530Q6P9A1 599 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-211ENST00000443563 RREB1Q92766 1687 aa14.46□□□□□ -0.09
HDAC6-211ENST00000443563 ITGB4P16144 1822 aa14.46□□□□□ -0.09
HDAC6-211ENST00000443563 KCNQ2O43526 872 aa14.46□□□□□ -0.09
HDAC6-211ENST00000443563 SYTL4Q96C24 671 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-211ENST00000443563 PNNQ9H307 717 aaKnown RBP14.46□□□□□ -0.09
HDAC6-211ENST00000443563 ANP32CO43423 234 aa14.45□□□□□ -0.1
HDAC6-211ENST00000443563 FCHSD2O94868 740 aa14.45□□□□□ -0.1
HDAC6-211ENST00000443563 NEFMP07197 916 aa14.45□□□□□ -0.1
HDAC6-211ENST00000443563 PRIM1P49642 420 aaKnown RBP14.45□□□□□ -0.1
HDAC6-211ENST00000443563 DCAF5Q96JK2 942 aa14.45□□□□□ -0.1
HDAC6-211ENST00000443563 CAMKK2Q96RR4 588 aa14.45□□□□□ -0.1
HDAC6-211ENST00000443563 TOGARAM1Q9Y4F4 1720 aa14.45□□□□□ -0.1
HDAC6-211ENST00000443563 EZH2Q15910 746 aaKnown RBP14.44□□□□□ -0.1
HDAC6-211ENST00000443563 AKAP4Q5JQC9 854 aa14.44□□□□□ -0.1
HDAC6-211ENST00000443563 VIRMAQ69YN4 1812 aaKnown RBP14.43□□□□□ -0.1
HDAC6-211ENST00000443563 SCN11AQ9UI33 1791 aa14.43□□□□□ -0.1
HDAC6-211ENST00000443563 PTF1AQ7RTS3 328 aa14.43□□□□□ -0.1
HDAC6-211ENST00000443563 GAS2L2Q8NHY3 880 aa14.43□□□□□ -0.1
HDAC6-211ENST00000443563 RSPH6AQ9H0K4 717 aa14.43□□□□□ -0.1
HDAC6-211ENST00000443563 NUP188Q5SRE5 1749 aa14.42□□□□□ -0.1
HDAC6-211ENST00000443563 ERVV-2B6SEH9 535 aa14.42□□□□□ -0.1
HDAC6-211ENST00000443563 HMGB2P26583 209 aaKnown RBP14.42□□□□□ -0.1
HDAC6-211ENST00000443563 PRKAR2BP31323 418 aa14.42□□□□□ -0.1
HDAC6-211ENST00000443563 MTHFSDQ2M296 383 aaKnown RBP14.41□□□□□ -0.1
HDAC6-211ENST00000443563 MPRIPQ6WCQ1 1025 aa14.41□□□□□ -0.1
HDAC6-211ENST00000443563 TMOD3Q9NYL9 352 aa14.41□□□□□ -0.1
HDAC6-211ENST00000443563 LY75O60449 1722 aa14.41□□□□□ -0.1
HDAC6-211ENST00000443563 WDR43Q15061 677 aaKnown RBP eCLIP14.4□□□□□ -0.1
HDAC6-211ENST00000443563 NBPF14Q5TI25 921 aa14.4□□□□□ -0.1
HDAC6-211ENST00000443563 SMARCC1Q92922 1105 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-211ENST00000443563 TXNRD1Q16881 649 aa14.39□□□□□ -0.11
HDAC6-211ENST00000443563 MAP3K5Q99683 1374 aa14.38□□□□□ -0.11
HDAC6-211ENST00000443563 GNAT3A8MTJ3 354 aa14.38□□□□□ -0.11
HDAC6-211ENST00000443563 CABP4P57796 275 aa14.38□□□□□ -0.11
HDAC6-211ENST00000443563 SLC27A3Q5K4L6 730 aa14.38□□□□□ -0.11
HDAC6-211ENST00000443563 ADAMTS7Q9UKP4 1686 aa14.38□□□□□ -0.11
HDAC6-211ENST00000443563 KDM6AO15550 1401 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-211ENST00000443563 MAPK8IP3Q9UPT6 1336 aa14.38□□□□□ -0.11
HDAC6-211ENST00000443563 PIGBQ92521 554 aa14.37□□□□□ -0.11
HDAC6-211ENST00000443563 PHACTR3Q96KR7 559 aa14.37□□□□□ -0.11
HDAC6-211ENST00000443563 RNMTO43148 476 aaKnown RBP14.36□□□□□ -0.11
HDAC6-211ENST00000443563 PROM2Q8N271 834 aa14.36□□□□□ -0.11
HDAC6-211ENST00000443563 PALLDQ8WX93 1383 aa14.35□□□□□ -0.11
HDAC6-211ENST00000443563 RTF1Q92541 710 aaKnown RBP14.35□□□□□ -0.11
HDAC6-211ENST00000443563 MRC1P22897 1456 aa14.35□□□□□ -0.11
HDAC6-211ENST00000443563 DLG5Q8TDM6 1919 aa14.35□□□□□ -0.11
HDAC6-211ENST00000443563 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
HDAC6-211ENST00000443563 NFATC2IPQ8NCF5 419 aa14.34□□□□□ -0.11
HDAC6-211ENST00000443563 PLEKHF1Q96S99 279 aa14.34□□□□□ -0.11
HDAC6-211ENST00000443563 SLC52A2Q9HAB3 445 aa14.34□□□□□ -0.11
HDAC6-211ENST00000443563 LGR6Q9HBX8 967 aa14.34□□□□□ -0.11
HDAC6-211ENST00000443563 CCNL1Q9UK58 526 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-211ENST00000443563 ZNF831Q5JPB2 1677 aa14.33□□□□□ -0.11
HDAC6-211ENST00000443563 TEFQ10587 303 aa14.33□□□□□ -0.12
HDAC6-211ENST00000443563 STK32BQ9NY57 414 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms