RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 NUTM2GQ5VZR2 741 aa11.37□□□□□ -0.59
SSXP3-201ENST00000442971 TOM1L2Q6ZVM7 507 aa11.37□□□□□ -0.59
SSXP3-201ENST00000442971 ANKARQ7Z5J8 1434 aa11.37□□□□□ -0.59
SSXP3-201ENST00000442971 KNDC1Q76NI1 1749 aa11.37□□□□□ -0.59
SSXP3-201ENST00000442971 DSG3P32926 999 aa11.36□□□□□ -0.59
SSXP3-201ENST00000442971 RNF181Q9P0P0 153 aa11.36□□□□□ -0.59
SSXP3-201ENST00000442971 COL18A1P39060 1754 aa11.35□□□□□ -0.59
SSXP3-201ENST00000442971 NGDNQ8NEJ9 315 aaKnown RBP11.35□□□□□ -0.59
SSXP3-201ENST00000442971 NBPF15Q8N660 670 aa11.34□□□□□ -0.59
SSXP3-201ENST00000442971 KIF1BO60333 1816 aa11.33□□□□□ -0.59
SSXP3-201ENST00000442971 PRR36Q9H6K5 1346 aa11.33□□□□□ -0.6
SSXP3-201ENST00000442971 DGKZQ13574 1117 aa11.33□□□□□ -0.6
SSXP3-201ENST00000442971 FCHSD2O94868 740 aa11.32□□□□□ -0.6
SSXP3-201ENST00000442971 BEGAINQ9BUH8 593 aa11.32□□□□□ -0.6
SSXP3-201ENST00000442971 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
SSXP3-201ENST00000442971 TMEM132EQ6IEE7 984 aa11.31□□□□□ -0.6
SSXP3-201ENST00000442971 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
SSXP3-201ENST00000442971 SIRT1Q96EB6 747 aa11.31□□□□□ -0.6
SSXP3-201ENST00000442971 ADAMTS7Q9UKP4 1686 aa11.3□□□□□ -0.6
SSXP3-201ENST00000442971 CASP8AP2Q9UKL3 1982 aa11.3□□□□□ -0.6
SSXP3-201ENST00000442971 A0A0G2JLW4 131 aa11.3□□□□□ -0.6
SSXP3-201ENST00000442971 GLTPD2A6NH11 291 aa11.3□□□□□ -0.6
SSXP3-201ENST00000442971 RPGRIP1LQ68CZ1 1315 aa11.3□□□□□ -0.6
SSXP3-201ENST00000442971 WDR33Q9C0J8 1336 aaKnown RBP11.3□□□□□ -0.6
SSXP3-201ENST00000442971 KIAA1551Q9HCM1 1747 aa11.29□□□□□ -0.6
SSXP3-201ENST00000442971 SBF1O95248 1867 aa11.29□□□□□ -0.6
SSXP3-201ENST00000442971 TMEM88BA6NKF7 163 aa11.29□□□□□ -0.6
SSXP3-201ENST00000442971 TGFB2P61812 414 aa11.29□□□□□ -0.6
SSXP3-201ENST00000442971 SPATA31E1Q6ZUB1 1445 aa11.29□□□□□ -0.6
SSXP3-201ENST00000442971 FLAD1Q8NFF5 587 aa11.29□□□□□ -0.6
SSXP3-201ENST00000442971 QRICH2Q9H0J4 1663 aa11.29□□□□□ -0.6
SSXP3-201ENST00000442971 TSKSQ9UJT2 592 aa11.29□□□□□ -0.6
SSXP3-201ENST00000442971 WDR17Q8IZU2 1322 aa11.28□□□□□ -0.6
SSXP3-201ENST00000442971 ZC3H4Q9UPT8 1303 aaKnown RBP11.28□□□□□ -0.6
SSXP3-201ENST00000442971 DEFB115Q30KQ5 88 aa11.28□□□□□ -0.6
SSXP3-201ENST00000442971 SZT2Q5T011 3432 aa11.27□□□□□ -0.61
SSXP3-201ENST00000442971 PASKQ96RG2 1323 aa11.27□□□□□ -0.61
SSXP3-201ENST00000442971 ZBTB7CA1YPR0 619 aa11.27□□□□□ -0.61
SSXP3-201ENST00000442971 RASSF10A6NK89 507 aa11.27□□□□□ -0.61
SSXP3-201ENST00000442971 POTECB2RU33 542 aa11.27□□□□□ -0.61
SSXP3-201ENST00000442971 GCP02774 474 aa11.27□□□□□ -0.61
SSXP3-201ENST00000442971 SAFB2Q14151 953 aaKnown RBP eCLIP11.27□□□□□ -0.61
SSXP3-201ENST00000442971 ARFGEF1Q9Y6D6 1849 aa11.27□□□□□ -0.61
SSXP3-201ENST00000442971 PPLO60437 1756 aa11.27□□□□□ -0.61
SSXP3-201ENST00000442971 LY75O60449 1722 aa11.27□□□□□ -0.61
SSXP3-201ENST00000442971 YTHDC2Q9H6S0 1430 aaKnown RBP11.26□□□□□ -0.61
SSXP3-201ENST00000442971 NUP155O75694 1391 aa11.26□□□□□ -0.61
SSXP3-201ENST00000442971 KIF13BQ9NQT8 1826 aa11.26□□□□□ -0.61
SSXP3-201ENST00000442971 CCNL1Q9UK58 526 aaPredicted RBP11.26□□□□□ -0.61
SSXP3-201ENST00000442971 USP54Q70EL1 1684 aa11.26□□□□□ -0.61
SSXP3-201ENST00000442971 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
SSXP3-201ENST00000442971 SMIM5Q71RC9 77 aa11.25□□□□□ -0.61
SSXP3-201ENST00000442971 CARD10Q9BWT7 1032 aa11.25□□□□□ -0.61
SSXP3-201ENST00000442971 BRCA1P38398 1863 aaKnown RBP11.25□□□□□ -0.61
SSXP3-201ENST00000442971 ABCC6O95255 1503 aa11.25□□□□□ -0.61
SSXP3-201ENST00000442971 ITSN1Q15811 1721 aa11.24□□□□□ -0.61
SSXP3-201ENST00000442971 DPEP1P16444 411 aa11.23□□□□□ -0.61
SSXP3-201ENST00000442971 ABTB2Q8N961 1025 aa11.23□□□□□ -0.61
SSXP3-201ENST00000442971 POTEIP0CG38 1075 aa11.22□□□□□ -0.61
SSXP3-201ENST00000442971 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
SSXP3-201ENST00000442971 DCAF5Q96JK2 942 aa11.22□□□□□ -0.61
SSXP3-201ENST00000442971 PRAM1Q96QH2 718 aa11.22□□□□□ -0.61
SSXP3-201ENST00000442971 LTBP1Q14766 1721 aa11.22□□□□□ -0.61
SSXP3-201ENST00000442971 ERBB3P21860 1342 aa11.21□□□□□ -0.61
SSXP3-201ENST00000442971 ADGRF5Q8IZF2 1346 aa11.21□□□□□ -0.61
SSXP3-201ENST00000442971 THSD7BQ9C0I4 1608 aa11.21□□□□□ -0.61
SSXP3-201ENST00000442971 EIF3AQ14152 1382 aaKnown RBP11.21□□□□□ -0.62
SSXP3-201ENST00000442971 COL6A3P12111 3177 aa11.21□□□□□ -0.62
SSXP3-201ENST00000442971 AXIN2Q9Y2T1 843 aa11.2□□□□□ -0.62
SSXP3-201ENST00000442971 MEGF6O75095 1541 aa11.2□□□□□ -0.62
SSXP3-201ENST00000442971 PPIP5K1Q6PFW1 1433 aa11.19□□□□□ -0.62
SSXP3-201ENST00000442971 CSB-PGBD3P0DP91 1061 aa11.19□□□□□ -0.62
SSXP3-201ENST00000442971 KANK4Q5T7N3 995 aaPredicted RBP11.19□□□□□ -0.62
SSXP3-201ENST00000442971 NLRP13Q86W25 1043 aa11.19□□□□□ -0.62
SSXP3-201ENST00000442971 VPS8Q8N3P4 1428 aa11.18□□□□□ -0.62
SSXP3-201ENST00000442971 CA12O43570 354 aa11.18□□□□□ -0.62
SSXP3-201ENST00000442971 CCDC7Q96M83 1385 aa11.18□□□□□ -0.62
SSXP3-201ENST00000442971 MINK1Q8N4C8 1332 aaPredicted RBP11.18□□□□□ -0.62
SSXP3-201ENST00000442971 KDM6AO15550 1401 aaPredicted RBP11.18□□□□□ -0.62
SSXP3-201ENST00000442971 ZBTB22O15209 634 aa11.17□□□□□ -0.62
SSXP3-201ENST00000442971 ITGBL1O95965 494 aaPredicted RBP11.17□□□□□ -0.62
SSXP3-201ENST00000442971 KCNA3P22001 575 aa11.17□□□□□ -0.62
SSXP3-201ENST00000442971 SYTL4Q96C24 671 aaPredicted RBP11.17□□□□□ -0.62
SSXP3-201ENST00000442971 GPR101Q96P66 508 aaPredicted RBP11.17□□□□□ -0.62
SSXP3-201ENST00000442971 PIM2Q9P1W9 311 aa11.17□□□□□ -0.62
SSXP3-201ENST00000442971 C5P01031 1676 aa11.17□□□□□ -0.62
SSXP3-201ENST00000442971 MMP10P09238 476 aa11.16□□□□□ -0.62
SSXP3-201ENST00000442971 DALRD3Q5D0E6 543 aaKnown RBP11.16□□□□□ -0.62
SSXP3-201ENST00000442971 DPY19L2Q6NUT2 758 aa11.16□□□□□ -0.62
SSXP3-201ENST00000442971 CAPNS2Q96L46 248 aa11.16□□□□□ -0.62
SSXP3-201ENST00000442971 POGKQ9P215 609 aa11.16□□□□□ -0.62
SSXP3-201ENST00000442971 ABT1Q9ULW3 272 aaKnown RBP11.16□□□□□ -0.62
SSXP3-201ENST00000442971 LMNB1P20700 586 aa11.15□□□□□ -0.62
SSXP3-201ENST00000442971 PRIM1P49642 420 aaKnown RBP11.15□□□□□ -0.62
SSXP3-201ENST00000442971 RASSF7Q02833 373 aa11.15□□□□□ -0.62
SSXP3-201ENST00000442971 TIAM2Q8IVF5 1701 aa11.15□□□□□ -0.63
SSXP3-201ENST00000442971 ABCB7O75027 752 aa11.14□□□□□ -0.63
SSXP3-201ENST00000442971 PHF14O94880 888 aa11.14□□□□□ -0.63
SSXP3-201ENST00000442971 ECE1P42892 770 aa11.14□□□□□ -0.63
SSXP3-201ENST00000442971 AMIGO3Q86WK7 504 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms