RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
TM9SF4-204ENST00000442842 ADAMTS8Q9UP79 889 aa18.04■□□□□ 0.48
TM9SF4-204ENST00000442842 LRRC37A3O60309 1634 aa18.04■□□□□ 0.48
TM9SF4-204ENST00000442842 THSD7AQ9UPZ6 1657 aa18.03■□□□□ 0.48
TM9SF4-204ENST00000442842 RGS12O14924 1447 aa18.02■□□□□ 0.48
TM9SF4-204ENST00000442842 TNS2Q63HR2 1409 aa18.02■□□□□ 0.48
TM9SF4-204ENST00000442842 MAPK8IP3Q9UPT6 1336 aa18.01■□□□□ 0.47
TM9SF4-204ENST00000442842 CDCA7Q9BWT1 371 aaPredicted RBP18.01■□□□□ 0.47
TM9SF4-204ENST00000442842 FCHSD2O94868 740 aa18■□□□□ 0.47
TM9SF4-204ENST00000442842 NEFMP07197 916 aa18■□□□□ 0.47
TM9SF4-204ENST00000442842 DDB1Q16531 1140 aa18■□□□□ 0.47
TM9SF4-204ENST00000442842 SEPT12Q8IYM1 358 aa18■□□□□ 0.47
TM9SF4-204ENST00000442842 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
TM9SF4-204ENST00000442842 ZCRB1Q8TBF4 217 aaKnown RBP17.98■□□□□ 0.47
TM9SF4-204ENST00000442842 SPG7Q9UQ90 795 aa17.98■□□□□ 0.47
TM9SF4-204ENST00000442842 PKD1L3Q7Z443 1732 aa17.98■□□□□ 0.47
TM9SF4-204ENST00000442842 SENP3-EIF4A1A0A087X0R7 540 aa17.97■□□□□ 0.47
TM9SF4-204ENST00000442842 EXOC5O00471 708 aa17.97■□□□□ 0.47
TM9SF4-204ENST00000442842 PLEKHO1Q53GL0 409 aaPredicted RBP17.97■□□□□ 0.47
TM9SF4-204ENST00000442842 PCDH11XQ9BZA7 1347 aa17.97■□□□□ 0.47
TM9SF4-204ENST00000442842 PCDH11YQ9BZA8 1340 aa17.97■□□□□ 0.47
TM9SF4-204ENST00000442842 MTHFSDQ2M296 383 aaKnown RBP17.96■□□□□ 0.47
TM9SF4-204ENST00000442842 ZNF530Q6P9A1 599 aaPredicted RBP17.96■□□□□ 0.47
TM9SF4-204ENST00000442842 DDX54Q8TDD1 881 aaKnown RBP17.96■□□□□ 0.47
TM9SF4-204ENST00000442842 RUNDC1Q96C34 613 aa17.96■□□□□ 0.47
TM9SF4-204ENST00000442842 PHACTR3Q96KR7 559 aa17.96■□□□□ 0.47
TM9SF4-204ENST00000442842 PLEKHF1Q96S99 279 aa17.96■□□□□ 0.47
TM9SF4-204ENST00000442842 PLEKHG2Q9H7P9 1386 aa17.95■□□□□ 0.46
TM9SF4-204ENST00000442842 ONECUT3O60422 494 aaPredicted RBP17.95■□□□□ 0.46
TM9SF4-204ENST00000442842 PDE3BQ13370 1112 aa17.95■□□□□ 0.46
TM9SF4-204ENST00000442842 AMOTQ4VCS5 1084 aa17.95■□□□□ 0.46
TM9SF4-204ENST00000442842 SHANK3Q9BYB0 1731 aa17.95■□□□□ 0.46
TM9SF4-204ENST00000442842 GAS2L2Q8NHY3 880 aa17.94■□□□□ 0.46
TM9SF4-204ENST00000442842 C1orf141Q5JVX7 400 aa17.93■□□□□ 0.46
TM9SF4-204ENST00000442842 RRP7AQ9Y3A4 280 aaKnown RBP17.93■□□□□ 0.46
TM9SF4-204ENST00000442842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.46
TM9SF4-204ENST00000442842 APAF1O14727 1248 aa17.91■□□□□ 0.46
TM9SF4-204ENST00000442842 CYP27B1O15528 508 aa17.91■□□□□ 0.46
TM9SF4-204ENST00000442842 PHKG2P15735 406 aa17.91■□□□□ 0.46
TM9SF4-204ENST00000442842 NEUROD2Q15784 382 aa17.91■□□□□ 0.46
TM9SF4-204ENST00000442842 FAM182BQ5T319 152 aa17.91■□□□□ 0.46
TM9SF4-204ENST00000442842 KRT27Q7Z3Y8 459 aa17.91■□□□□ 0.46
TM9SF4-204ENST00000442842 IFNL2Q8IZJ0 200 aa17.91■□□□□ 0.46
TM9SF4-204ENST00000442842 MAP3K5Q99683 1374 aa17.91■□□□□ 0.46
TM9SF4-204ENST00000442842 NFE2L2Q16236 605 aa17.9■□□□□ 0.46
TM9SF4-204ENST00000442842 AKAP4Q5JQC9 854 aa17.9■□□□□ 0.46
TM9SF4-204ENST00000442842 MARCH10Q8NA82 808 aaPredicted RBP17.9■□□□□ 0.46
TM9SF4-204ENST00000442842 BRWD3Q6RI45 1802 aa17.89■□□□□ 0.45
TM9SF4-204ENST00000442842 TMPOP42166 694 aaKnown RBP17.88■□□□□ 0.45
TM9SF4-204ENST00000442842 SALL2Q9Y467 1007 aaPredicted RBP17.88■□□□□ 0.45
TM9SF4-204ENST00000442842 RIPK4P57078 832 aa17.87■□□□□ 0.45
TM9SF4-204ENST00000442842 MPRIPQ6WCQ1 1025 aa17.87■□□□□ 0.45
TM9SF4-204ENST00000442842 KDM6AO15550 1401 aaPredicted RBP17.87■□□□□ 0.45
TM9SF4-204ENST00000442842 GNAT3A8MTJ3 354 aa17.86■□□□□ 0.45
TM9SF4-204ENST00000442842 RTF1Q92541 710 aaKnown RBP17.86■□□□□ 0.45
TM9SF4-204ENST00000442842 HSP90AB1P08238 724 aaKnown RBP17.85■□□□□ 0.45
TM9SF4-204ENST00000442842 DOT1LQ8TEK3 1739 aa17.85■□□□□ 0.45
TM9SF4-204ENST00000442842 ACSBG1Q96GR2 724 aa17.85■□□□□ 0.45
TM9SF4-204ENST00000442842 TOGARAM1Q9Y4F4 1720 aa17.84■□□□□ 0.45
TM9SF4-204ENST00000442842 LMOD3Q0VAK6 560 aa17.84■□□□□ 0.45
TM9SF4-204ENST00000442842 DCTN1Q14203 1278 aa17.84■□□□□ 0.45
TM9SF4-204ENST00000442842 MCM10Q7L590 875 aa17.84■□□□□ 0.45
TM9SF4-204ENST00000442842 SYTL4Q96C24 671 aaPredicted RBP17.83■□□□□ 0.44
TM9SF4-204ENST00000442842 DCAF5Q96JK2 942 aa17.83■□□□□ 0.44
TM9SF4-204ENST00000442842 HNRNPUQ00839 825 aaKnown RBP eCLIP17.82■□□□□ 0.44
TM9SF4-204ENST00000442842 THUMPD2Q9BTF0 503 aaKnown RBP17.82■□□□□ 0.44
TM9SF4-204ENST00000442842 LGR6Q9HBX8 967 aa17.82■□□□□ 0.44
TM9SF4-204ENST00000442842 RNMTO43148 476 aaKnown RBP17.81■□□□□ 0.44
TM9SF4-204ENST00000442842 NKX1-1Q15270 411 aaPredicted RBP17.81■□□□□ 0.44
TM9SF4-204ENST00000442842 YTHDC1Q96MU7 727 aaKnown RBP17.81■□□□□ 0.44
TM9SF4-204ENST00000442842 FAM196AQ6ZSG2 479 aa17.8■□□□□ 0.44
TM9SF4-204ENST00000442842 TRIM35Q9UPQ4 493 aa17.8■□□□□ 0.44
TM9SF4-204ENST00000442842 DLG5Q8TDM6 1919 aa17.79■□□□□ 0.44
TM9SF4-204ENST00000442842 HTATSF1O43719 755 aaKnown RBP17.79■□□□□ 0.44
TM9SF4-204ENST00000442842 CABP4P57796 275 aa17.79■□□□□ 0.44
TM9SF4-204ENST00000442842 TEFQ10587 303 aa17.79■□□□□ 0.44
TM9SF4-204ENST00000442842 IL17REQ8NFR9 667 aa17.79■□□□□ 0.44
TM9SF4-204ENST00000442842 MRC1P22897 1456 aa17.79■□□□□ 0.44
TM9SF4-204ENST00000442842 NHSQ6T4R5 1651 aa17.79■□□□□ 0.44
TM9SF4-204ENST00000442842 ADAMTS7Q9UKP4 1686 aa17.79■□□□□ 0.44
TM9SF4-204ENST00000442842 PRIM1P49642 420 aaKnown RBP17.78■□□□□ 0.44
TM9SF4-204ENST00000442842 TMOD3Q9NYL9 352 aa17.78■□□□□ 0.44
TM9SF4-204ENST00000442842 BCL9O00512 1426 aa17.78■□□□□ 0.44
TM9SF4-204ENST00000442842 CEMIPQ8WUJ3 1361 aa17.78■□□□□ 0.44
TM9SF4-204ENST00000442842 SCN11AQ9UI33 1791 aa17.77■□□□□ 0.44
TM9SF4-204ENST00000442842 KCNQ2O43526 872 aa17.77■□□□□ 0.44
TM9SF4-204ENST00000442842 EP400Q96L91 3159 aa17.76■□□□□ 0.43
TM9SF4-204ENST00000442842 ERVV-2B6SEH9 535 aa17.76■□□□□ 0.43
TM9SF4-204ENST00000442842 TRIM37O94972 964 aa17.76■□□□□ 0.43
TM9SF4-204ENST00000442842 ILDR2Q71H61 639 aa17.76■□□□□ 0.43
TM9SF4-204ENST00000442842 SLC52A2Q9HAB3 445 aa17.76■□□□□ 0.43
TM9SF4-204ENST00000442842 WWC1Q8IX03 1113 aa17.75■□□□□ 0.43
TM9SF4-204ENST00000442842 LAS1LQ9Y4W2 734 aaKnown RBP17.75■□□□□ 0.43
TM9SF4-204ENST00000442842 CCDC27Q2M243 656 aa17.74■□□□□ 0.43
TM9SF4-204ENST00000442842 PTF1AQ7RTS3 328 aa17.74■□□□□ 0.43
TM9SF4-204ENST00000442842 NFATC2IPQ8NCF5 419 aa17.74■□□□□ 0.43
TM9SF4-204ENST00000442842 PIGBQ92521 554 aa17.73■□□□□ 0.43
TM9SF4-204ENST00000442842 VIRMAQ69YN4 1812 aaKnown RBP17.72■□□□□ 0.43
TM9SF4-204ENST00000442842 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
TM9SF4-204ENST00000442842 NGEFQ8N5V2 710 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms