RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 LRRC59Q96AG4 307 aaKnown RBP24.18■■□□□ 1.46
POLR1E-203ENST00000442009 CPDO75976 1380 aa24.18■■□□□ 1.46
POLR1E-203ENST00000442009 LRRC37A3O60309 1634 aa24.17■■□□□ 1.46
POLR1E-203ENST00000442009 PLEKHG5O94827 1062 aa24.17■■□□□ 1.46
POLR1E-203ENST00000442009 CABLES1Q8TDN4 633 aa24.17■■□□□ 1.46
POLR1E-203ENST00000442009 LTBP4Q8N2S1 1624 aa24.16■■□□□ 1.46
POLR1E-203ENST00000442009 ERBB3P21860 1342 aa24.16■■□□□ 1.46
POLR1E-203ENST00000442009 TSPYL6Q8N831 410 aa24.16■■□□□ 1.46
POLR1E-203ENST00000442009 FRAT1Q92837 279 aaPredicted RBP24.16■■□□□ 1.46
POLR1E-203ENST00000442009 GNAT3A8MTJ3 354 aa24.14■■□□□ 1.46
POLR1E-203ENST00000442009 SMC4Q9NTJ3 1288 aa24.14■■□□□ 1.46
POLR1E-203ENST00000442009 C8orf58Q8NAV2 365 aa24.14■■□□□ 1.45
POLR1E-203ENST00000442009 PANK1Q8TE04 598 aa24.14■■□□□ 1.45
POLR1E-203ENST00000442009 RTF1Q92541 710 aaKnown RBP24.14■■□□□ 1.45
POLR1E-203ENST00000442009 MAP3K5Q99683 1374 aa24.13■■□□□ 1.45
POLR1E-203ENST00000442009 CANXP27824 592 aaKnown RBP24.13■■□□□ 1.45
POLR1E-203ENST00000442009 RLBP1P12271 317 aa24.12■■□□□ 1.45
POLR1E-203ENST00000442009 ZKSCAN2Q63HK3 967 aa24.12■■□□□ 1.45
POLR1E-203ENST00000442009 TNNQ9UQP3 1299 aa24.12■■□□□ 1.45
POLR1E-203ENST00000442009 KIAA0232Q92628 1395 aa24.12■■□□□ 1.45
POLR1E-203ENST00000442009 IL17REQ8NFR9 667 aa24.12■■□□□ 1.45
POLR1E-203ENST00000442009 TWISTNBQ3B726 338 aaPredicted RBP24.11■■□□□ 1.45
POLR1E-203ENST00000442009 ABCA3Q99758 1704 aa24.09■■□□□ 1.45
POLR1E-203ENST00000442009 COG6Q9Y2V7 657 aa24.09■■□□□ 1.45
POLR1E-203ENST00000442009 FAM208AQ9UK61 1670 aaKnown RBP24.08■■□□□ 1.45
POLR1E-203ENST00000442009 NOB1Q9ULX3 412 aaKnown RBP24.08■■□□□ 1.45
POLR1E-203ENST00000442009 KIF16BQ96L93 1317 aa24.08■■□□□ 1.45
POLR1E-203ENST00000442009 CEMIPQ8WUJ3 1361 aa24.08■■□□□ 1.45
POLR1E-203ENST00000442009 MS4A1P11836 297 aa24.07■■□□□ 1.44
POLR1E-203ENST00000442009 TRIM27P14373 513 aa24.07■■□□□ 1.44
POLR1E-203ENST00000442009 AAMPQ13685 434 aa24.07■■□□□ 1.44
POLR1E-203ENST00000442009 AMOTQ4VCS5 1084 aa24.07■■□□□ 1.44
POLR1E-203ENST00000442009 ATF7IPQ6VMQ6 1270 aa24.07■■□□□ 1.44
POLR1E-203ENST00000442009 MRPL50Q8N5N7 158 aaKnown RBP24.07■■□□□ 1.44
POLR1E-203ENST00000442009 BABAM1Q9NWV8 329 aa24.07■■□□□ 1.44
POLR1E-203ENST00000442009 ELL2O00472 640 aaPredicted RBP24.06■■□□□ 1.44
POLR1E-203ENST00000442009 PLEKHO1Q53GL0 409 aaPredicted RBP24.06■■□□□ 1.44
POLR1E-203ENST00000442009 DZIP1LQ8IYY4 767 aaKnown RBP24.06■■□□□ 1.44
POLR1E-203ENST00000442009 TSHZ2Q9NRE2 1034 aa24.06■■□□□ 1.44
POLR1E-203ENST00000442009 KDM2BQ8NHM5 1336 aa24.06■■□□□ 1.44
POLR1E-203ENST00000442009 IPO8O15397 1037 aaKnown RBP24.05■■□□□ 1.44
POLR1E-203ENST00000442009 CHRNA2Q15822 529 aa24.05■■□□□ 1.44
POLR1E-203ENST00000442009 ARHGAP45Q92619 1136 aa24.05■■□□□ 1.44
POLR1E-203ENST00000442009 PLEKHG2Q9H7P9 1386 aa24.03■■□□□ 1.44
POLR1E-203ENST00000442009 KRT24Q2M2I5 525 aa24.03■■□□□ 1.44
POLR1E-203ENST00000442009 AKAP4Q5JQC9 854 aa24.03■■□□□ 1.44
POLR1E-203ENST00000442009 CLUAP1Q96AJ1 413 aa24.03■■□□□ 1.44
POLR1E-203ENST00000442009 MIS18AQ9NYP9 233 aa24.03■■□□□ 1.44
POLR1E-203ENST00000442009 MVPQ14764 893 aaKnown RBP24.03■■□□□ 1.44
POLR1E-203ENST00000442009 TSPYL4Q9UJ04 414 aa24.03■■□□□ 1.44
POLR1E-203ENST00000442009 ROBO1Q9Y6N7 1651 aa24.02■■□□□ 1.44
POLR1E-203ENST00000442009 HAP1P54257 671 aaPredicted RBP24.02■■□□□ 1.44
POLR1E-203ENST00000442009 TAF7Q15545 349 aaPredicted RBP24.02■■□□□ 1.44
POLR1E-203ENST00000442009 AHDC1Q5TGY3 1603 aaPredicted RBP24.01■■□□□ 1.43
POLR1E-203ENST00000442009 VIRMAQ69YN4 1812 aaKnown RBP24.01■■□□□ 1.43
POLR1E-203ENST00000442009 ADAMTS7Q9UKP4 1686 aa24.01■■□□□ 1.43
POLR1E-203ENST00000442009 ZNF530Q6P9A1 599 aaPredicted RBP24■■□□□ 1.43
POLR1E-203ENST00000442009 NLRP2Q9NX02 1062 aa24■■□□□ 1.43
POLR1E-203ENST00000442009 OVOS2A0A0G2JMS6 1433 aa24■■□□□ 1.43
POLR1E-203ENST00000442009 LGR6Q9HBX8 967 aa23.99■■□□□ 1.43
POLR1E-203ENST00000442009 CENPQQ7L2Z9 268 aaPredicted RBP23.98■■□□□ 1.43
POLR1E-203ENST00000442009 FTSJ3Q8IY81 847 aaKnown RBP23.98■■□□□ 1.43
POLR1E-203ENST00000442009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.98■■□□□ 1.43
POLR1E-203ENST00000442009 PRDM11Q9NQV5 511 aa23.97■■□□□ 1.43
POLR1E-203ENST00000442009 KDM3BQ7LBC6 1761 aa23.96■■□□□ 1.43
POLR1E-203ENST00000442009 MEGF6O75095 1541 aa23.95■■□□□ 1.43
POLR1E-203ENST00000442009 SOS1Q07889 1333 aaPredicted RBP23.95■■□□□ 1.43
POLR1E-203ENST00000442009 TCERG1O14776 1098 aaKnown RBP23.95■■□□□ 1.42
POLR1E-203ENST00000442009 TMEM57Q8N5G2 664 aa23.95■■□□□ 1.42
POLR1E-203ENST00000442009 RAPGEF4Q8WZA2 1011 aa23.95■■□□□ 1.42
POLR1E-203ENST00000442009 COL5A2P05997 1499 aaPredicted RBP23.94■■□□□ 1.42
POLR1E-203ENST00000442009 RNMTO43148 476 aaKnown RBP23.94■■□□□ 1.42
POLR1E-203ENST00000442009 CSB-PGBD3P0DP91 1061 aa23.94■■□□□ 1.42
POLR1E-203ENST00000442009 DDX19BQ9UMR2 479 aa23.94■■□□□ 1.42
POLR1E-203ENST00000442009 WDR17Q8IZU2 1322 aa23.94■■□□□ 1.42
POLR1E-203ENST00000442009 C1orf141Q5JVX7 400 aa23.94■■□□□ 1.42
POLR1E-203ENST00000442009 PKD1L3Q7Z443 1732 aa23.93■■□□□ 1.42
POLR1E-203ENST00000442009 COL22A1Q8NFW1 1626 aaPredicted RBP23.93■■□□□ 1.42
POLR1E-203ENST00000442009 SIPA1L3O60292 1781 aaPredicted RBP23.93■■□□□ 1.42
POLR1E-203ENST00000442009 MPRIPQ6WCQ1 1025 aa23.93■■□□□ 1.42
POLR1E-203ENST00000442009 PCDHB15Q9Y5E8 787 aa23.93■■□□□ 1.42
POLR1E-203ENST00000442009 ABCC4O15439 1325 aa23.93■■□□□ 1.42
POLR1E-203ENST00000442009 IGHDP01880 384 aa23.92■■□□□ 1.42
POLR1E-203ENST00000442009 TATP17735 454 aaPredicted RBP23.92■■□□□ 1.42
POLR1E-203ENST00000442009 CACNA1FO60840 1977 aa23.92■■□□□ 1.42
POLR1E-203ENST00000442009 API5Q9BZZ5 524 aaKnown RBP23.9■■□□□ 1.42
POLR1E-203ENST00000442009 SCN11AQ9UI33 1791 aa23.9■■□□□ 1.42
POLR1E-203ENST00000442009 ITPRIPQ8IWB1 547 aa23.89■■□□□ 1.42
POLR1E-203ENST00000442009 ZBTB40Q9NUA8 1239 aa23.89■■□□□ 1.42
POLR1E-203ENST00000442009 SPG7Q9UQ90 795 aa23.89■■□□□ 1.42
POLR1E-203ENST00000442009 RGS12O14924 1447 aa23.89■■□□□ 1.42
POLR1E-203ENST00000442009 TEFQ10587 303 aa23.88■■□□□ 1.41
POLR1E-203ENST00000442009 PHKG2P15735 406 aa23.87■■□□□ 1.41
POLR1E-203ENST00000442009 EIF4A1P60842 406 aaKnown RBP23.87■■□□□ 1.41
POLR1E-203ENST00000442009 PTPRCP08575 1304 aa23.87■■□□□ 1.41
POLR1E-203ENST00000442009 CARD10Q9BWT7 1032 aa23.87■■□□□ 1.41
POLR1E-203ENST00000442009 SLC4A2P04920 1241 aa23.86■■□□□ 1.41
POLR1E-203ENST00000442009 KDM6AO15550 1401 aaPredicted RBP23.85■■□□□ 1.41
POLR1E-203ENST00000442009 PARP4Q9UKK3 1724 aaKnown RBP23.85■■□□□ 1.41
POLR1E-203ENST00000442009 ZBTB7BO15156 539 aaPredicted RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms