RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 TATP17735 454 aaPredicted RBP27.72■■■□□ 2.03
VPS13B-204ENST00000441350 AMOTQ4VCS5 1084 aa27.72■■■□□ 2.03
VPS13B-204ENST00000441350 PLEKHO1Q53GL0 409 aaPredicted RBP27.71■■■□□ 2.03
VPS13B-204ENST00000441350 SPATA31A1Q5TZJ5 1347 aa27.71■■■□□ 2.03
VPS13B-204ENST00000441350 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.7■■■□□ 2.032e-7■■■■□ 23.3
VPS13B-204ENST00000441350 PARP4Q9UKK3 1724 aaKnown RBP27.7■■■□□ 2.03
VPS13B-204ENST00000441350 OVOS2A0A0G2JMS6 1433 aa27.7■■■□□ 2.03
VPS13B-204ENST00000441350 SPATA31A5Q5VU36 1347 aa27.7■■■□□ 2.03
VPS13B-204ENST00000441350 SPATA31A7Q8IWB4 1347 aa27.7■■■□□ 2.03
VPS13B-204ENST00000441350 USP35Q9P2H5 1018 aa27.7■■■□□ 2.02
VPS13B-204ENST00000441350 USP21Q9UK80 565 aa27.7■■■□□ 2.02
VPS13B-204ENST00000441350 IL2RBP14784 551 aa27.69■■■□□ 2.02
VPS13B-204ENST00000441350 VPS72Q15906 364 aa27.69■■■□□ 2.02
VPS13B-204ENST00000441350 PKD1L3Q7Z443 1732 aa27.69■■■□□ 2.02
VPS13B-204ENST00000441350 AFF2P51816 1311 aa27.68■■■□□ 2.02
VPS13B-204ENST00000441350 DISP2A7MBM2 1401 aa27.67■■■□□ 2.02
VPS13B-204ENST00000441350 LMOD3Q0VAK6 560 aa27.67■■■□□ 2.02
VPS13B-204ENST00000441350 PDE3BQ13370 1112 aa27.67■■■□□ 2.02
VPS13B-204ENST00000441350 THRAP3Q9Y2W1 955 aaKnown RBP27.67■■■□□ 2.02
VPS13B-204ENST00000441350 WNK3Q9BYP7 1800 aa27.66■■■□□ 2.02
VPS13B-204ENST00000441350 WDR63Q8IWG1 891 aa27.66■■■□□ 2.02
VPS13B-204ENST00000441350 SPG7Q9UQ90 795 aa27.65■■■□□ 2.02
VPS13B-204ENST00000441350 ZNF530Q6P9A1 599 aaPredicted RBP27.64■■■□□ 2.02
VPS13B-204ENST00000441350 HTATSF1O43719 755 aaKnown RBP27.63■■■□□ 2.01
VPS13B-204ENST00000441350 GOLGA2Q08379 1002 aa27.63■■■□□ 2.01
VPS13B-204ENST00000441350 MAP3K5Q99683 1374 aa27.63■■■□□ 2.01
VPS13B-204ENST00000441350 GNAT3A8MTJ3 354 aa27.63■■■□□ 2.01
VPS13B-204ENST00000441350 BARGINQ6ZT62 677 aa27.62■■■□□ 2.01
VPS13B-204ENST00000441350 CDCA7LQ96GN5 454 aa27.62■■■□□ 2.01
VPS13B-204ENST00000441350 CCDC9Q9Y3X0 531 aaKnown RBP27.62■■■□□ 2.01
VPS13B-204ENST00000441350 AKAP4Q5JQC9 854 aa27.61■■■□□ 2.01
VPS13B-204ENST00000441350 ZCRB1Q8TBF4 217 aaKnown RBP27.6■■■□□ 2.01
VPS13B-204ENST00000441350 CDCA7Q9BWT1 371 aaPredicted RBP27.6■■■□□ 2.01
VPS13B-204ENST00000441350 ATRNO75882 1429 aa27.6■■■□□ 2.01
VPS13B-204ENST00000441350 CENPBP07199 599 aaPredicted RBP27.59■■■□□ 2.01
VPS13B-204ENST00000441350 SHANK3Q9BYB0 1731 aa27.59■■■□□ 2.01
VPS13B-204ENST00000441350 DCTN1Q14203 1278 aa27.59■■■□□ 2.01
VPS13B-204ENST00000441350 C1orf141Q5JVX7 400 aa27.59■■■□□ 2.01
VPS13B-204ENST00000441350 RTF1Q92541 710 aaKnown RBP27.59■■■□□ 2.01
VPS13B-204ENST00000441350 THUMPD2Q9BTF0 503 aaKnown RBP27.59■■■□□ 2.01
VPS13B-204ENST00000441350 SPINK5Q9NQ38 1064 aaPredicted RBP27.59■■■□□ 2.01
VPS13B-204ENST00000441350 IL16Q14005 1332 aa27.58■■■□□ 2.01
VPS13B-204ENST00000441350 SLFN5Q08AF3 891 aa27.58■■■□□ 2.01
VPS13B-204ENST00000441350 CYP27B1O15528 508 aa27.57■■■□□ 2
VPS13B-204ENST00000441350 PHKG2P15735 406 aa27.57■■■□□ 2
VPS13B-204ENST00000441350 MCM10Q7L590 875 aa27.57■■■□□ 2
VPS13B-204ENST00000441350 TRMT2AQ8IZ69 625 aaKnown RBP27.56■■■□□ 2
VPS13B-204ENST00000441350 IL17REQ8NFR9 667 aa27.56■■■□□ 2
VPS13B-204ENST00000441350 TRPC5Q9UL62 973 aaPredicted RBP27.56■■■□□ 2
VPS13B-204ENST00000441350 PCDH11XQ9BZA7 1347 aa27.56■■■□□ 2
VPS13B-204ENST00000441350 PCDH11YQ9BZA8 1340 aa27.56■■■□□ 2
VPS13B-204ENST00000441350 E9PSI1 815 aa27.56■■■□□ 2
VPS13B-204ENST00000441350 CALD1Q05682 793 aaKnown RBP27.56■■■□□ 2
VPS13B-204ENST00000441350 IFNL2Q8IZJ0 200 aa27.56■■■□□ 2
VPS13B-204ENST00000441350 ADAMTS7Q9UKP4 1686 aa27.55■■■□□ 2
VPS13B-204ENST00000441350 LRRC37A3O60309 1634 aa27.55■■■□□ 2
VPS13B-204ENST00000441350 GLI3P10071 1580 aa27.54■■■□□ 2
VPS13B-204ENST00000441350 GJD4Q96KN9 370 aaPredicted RBP27.54■■■□□ 2
VPS13B-204ENST00000441350 CEMIPQ8WUJ3 1361 aa27.54■■■□□ 2
VPS13B-204ENST00000441350 VIRMAQ69YN4 1812 aaKnown RBP27.53■■■□□ 2
VPS13B-204ENST00000441350 TNS2Q63HR2 1409 aa27.52■■■□□ 2
VPS13B-204ENST00000441350 DUSP27Q5VZP5 1158 aa27.52■■■□□ 2
VPS13B-204ENST00000441350 MPRIPQ6WCQ1 1025 aa27.52■■■□□ 2
VPS13B-204ENST00000441350 LGR6Q9HBX8 967 aa27.52■■■□□ 2
VPS13B-204ENST00000441350 EXOC5O00471 708 aa27.51■■□□□ 1.99
VPS13B-204ENST00000441350 FAM98CQ17RN3 349 aaKnown RBP27.51■■□□□ 1.99
VPS13B-204ENST00000441350 QTRT2Q9H974 415 aaKnown RBP27.51■■□□□ 1.99
VPS13B-204ENST00000441350 SCN11AQ9UI33 1791 aa27.5■■□□□ 1.99
VPS13B-204ENST00000441350 RNMTO43148 476 aaKnown RBP27.5■■□□□ 1.99
VPS13B-204ENST00000441350 ZNF853P0CG23 659 aa27.5■■□□□ 1.99
VPS13B-204ENST00000441350 IFT57Q9NWB7 429 aa27.5■■□□□ 1.99
VPS13B-204ENST00000441350 KDM6AO15550 1401 aaPredicted RBP27.5■■□□□ 1.99
VPS13B-204ENST00000441350 HSP90AB1P08238 724 aaKnown RBP27.49■■□□□ 1.99
VPS13B-204ENST00000441350 NKX1-1Q15270 411 aaPredicted RBP27.49■■□□□ 1.99
VPS13B-204ENST00000441350 THSD7AQ9UPZ6 1657 aa27.49■■□□□ 1.99
VPS13B-204ENST00000441350 ZNF772Q68DY9 489 aaPredicted RBP27.49■■□□□ 1.99
VPS13B-204ENST00000441350 DDX54Q8TDD1 881 aaKnown RBP27.49■■□□□ 1.99
VPS13B-204ENST00000441350 CFAP44Q96MT7 982 aa27.49■■□□□ 1.99
VPS13B-204ENST00000441350 MYH16Q9H6N6 1097 aa27.49■■□□□ 1.99
VPS13B-204ENST00000441350 GNAI1P63096 354 aa27.48■■□□□ 1.99
VPS13B-204ENST00000441350 DDB1Q16531 1140 aa27.48■■□□□ 1.99
VPS13B-204ENST00000441350 DCAF5Q96JK2 942 aa27.48■■□□□ 1.99
VPS13B-204ENST00000441350 ONECUT3O60422 494 aaPredicted RBP27.46■■□□□ 1.99
VPS13B-204ENST00000441350 CHL1O00533 1208 aa27.45■■□□□ 1.98
VPS13B-204ENST00000441350 FANCIQ9NVI1 1328 aa27.44■■□□□ 1.98
VPS13B-204ENST00000441350 TSR2Q969E8 191 aaKnown RBP27.44■■□□□ 1.98
VPS13B-204ENST00000441350 LAS1LQ9Y4W2 734 aaKnown RBP27.44■■□□□ 1.98
VPS13B-204ENST00000441350 SIPA1L3O60292 1781 aaPredicted RBP27.43■■□□□ 1.98
VPS13B-204ENST00000441350 TAF7Q15545 349 aaPredicted RBP27.42■■□□□ 1.98
VPS13B-204ENST00000441350 MBIPQ9NS73 344 aa27.42■■□□□ 1.98
VPS13B-204ENST00000441350 MRC1P22897 1456 aa27.42■■□□□ 1.98
VPS13B-204ENST00000441350 TEFQ10587 303 aa27.41■■□□□ 1.98
VPS13B-204ENST00000441350 BABAM1Q9NWV8 329 aa27.41■■□□□ 1.98
VPS13B-204ENST00000441350 ILDR1Q86SU0 546 aaPredicted RBP27.4■■□□□ 1.98
VPS13B-204ENST00000441350 MARCH10Q8NA82 808 aaPredicted RBP27.39■■□□□ 1.98
VPS13B-204ENST00000441350 SLC52A2Q9HAB3 445 aa27.39■■□□□ 1.98
VPS13B-204ENST00000441350 ERVV-2B6SEH9 535 aa27.38■■□□□ 1.97
VPS13B-204ENST00000441350 MIS18AQ9NYP9 233 aa27.38■■□□□ 1.97
VPS13B-204ENST00000441350 RGS17Q9UGC6 210 aaPredicted RBP27.38■■□□□ 1.97
VPS13B-204ENST00000441350 TOGARAM1Q9Y4F4 1720 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms