RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 NBPF14Q5TI25 921 aa24.13■■□□□ 1.45
CCDC188-201ENST00000439765 BTAF1O14981 1849 aa24.12■■□□□ 1.45
CCDC188-201ENST00000439765 PTF1AQ7RTS3 328 aa24.12■■□□□ 1.45
CCDC188-201ENST00000439765 CNGB1Q14028 1251 aaPredicted RBP24.11■■□□□ 1.45
CCDC188-201ENST00000439765 CC2D1BQ5T0F9 858 aaKnown RBP24.11■■□□□ 1.45
CCDC188-201ENST00000439765 POLKQ9UBT6 870 aa24.11■■□□□ 1.45
CCDC188-201ENST00000439765 SHANK3Q9BYB0 1731 aa24.11■■□□□ 1.45
CCDC188-201ENST00000439765 CASZ1Q86V15 1759 aa24.09■■□□□ 1.45
CCDC188-201ENST00000439765 MEGF6O75095 1541 aa24.06■■□□□ 1.44
CCDC188-201ENST00000439765 USHBP1Q8N6Y0 703 aa24.06■■□□□ 1.44
CCDC188-201ENST00000439765 NPC1L1Q9UHC9 1359 aa24.05■■□□□ 1.44
CCDC188-201ENST00000439765 NBPF6Q5VWK0 638 aa24.04■■□□□ 1.44
CCDC188-201ENST00000439765 PROM2Q8N271 834 aa24.04■■□□□ 1.44
CCDC188-201ENST00000439765 NBPF4Q96M43 638 aa24.04■■□□□ 1.44
CCDC188-201ENST00000439765 DOT1LQ8TEK3 1739 aa24.03■■□□□ 1.44
CCDC188-201ENST00000439765 KCNQ2O43526 872 aa24.02■■□□□ 1.44
CCDC188-201ENST00000439765 PAPPAQ13219 1627 aa24.01■■□□□ 1.43
CCDC188-201ENST00000439765 ANO8Q9HCE9 1232 aaPredicted RBP24■■□□□ 1.43
CCDC188-201ENST00000439765 TXNRD1Q16881 649 aa24■■□□□ 1.43
CCDC188-201ENST00000439765 PKD1L3Q7Z443 1732 aa23.99■■□□□ 1.43
CCDC188-201ENST00000439765 EIF4A2Q14240 407 aaKnown RBP23.99■■□□□ 1.43
CCDC188-201ENST00000439765 NCAPD2Q15021 1401 aa23.98■■□□□ 1.43
CCDC188-201ENST00000439765 ACSBG1Q96GR2 724 aa23.98■■□□□ 1.43
CCDC188-201ENST00000439765 LY75O60449 1722 aa23.97■■□□□ 1.43
CCDC188-201ENST00000439765 QSER1Q2KHR3 1735 aa23.95■■□□□ 1.42
CCDC188-201ENST00000439765 MTHFSP49914 203 aa23.94■■□□□ 1.42
CCDC188-201ENST00000439765 RAPGEF4Q8WZA2 1011 aa23.94■■□□□ 1.42
CCDC188-201ENST00000439765 EYA1Q99502 592 aa23.94■■□□□ 1.42
CCDC188-201ENST00000439765 SPON1Q9HCB6 807 aa23.94■■□□□ 1.42
CCDC188-201ENST00000439765 DDX10Q13206 875 aaKnown RBP23.93■■□□□ 1.42
CCDC188-201ENST00000439765 DDX54Q8TDD1 881 aaKnown RBP23.93■■□□□ 1.42
CCDC188-201ENST00000439765 TATP17735 454 aaPredicted RBP23.91■■□□□ 1.42
CCDC188-201ENST00000439765 ZCRB1Q8TBF4 217 aaKnown RBP23.91■■□□□ 1.42
CCDC188-201ENST00000439765 COL3A1P02461 1466 aaPredicted RBP23.9■■□□□ 1.42
CCDC188-201ENST00000439765 SLC15A2Q16348 729 aa23.9■■□□□ 1.42
CCDC188-201ENST00000439765 STK32BQ9NY57 414 aa23.9■■□□□ 1.42
CCDC188-201ENST00000439765 IGSF1Q8N6C5 1336 aa23.9■■□□□ 1.42
CCDC188-201ENST00000439765 TUBGCP6Q96RT7 1819 aa23.89■■□□□ 1.41
CCDC188-201ENST00000439765 ITGB4P16144 1822 aa23.88■■□□□ 1.41
CCDC188-201ENST00000439765 TOGARAM1Q9Y4F4 1720 aa23.87■■□□□ 1.41
CCDC188-201ENST00000439765 PDGFDQ9GZP0 370 aaPredicted RBP23.87■■□□□ 1.41
CCDC188-201ENST00000439765 IL13P35225 146 aa23.85■■□□□ 1.41
CCDC188-201ENST00000439765 AEBP1Q8IUX7 1158 aa23.84■■□□□ 1.41
CCDC188-201ENST00000439765 PCDH11XQ9BZA7 1347 aa23.84■■□□□ 1.41
CCDC188-201ENST00000439765 PCDH11YQ9BZA8 1340 aa23.84■■□□□ 1.41
CCDC188-201ENST00000439765 PPP2R1AP30153 589 aa23.83■■□□□ 1.41
CCDC188-201ENST00000439765 SLC27A3Q5K4L6 730 aa23.83■■□□□ 1.41
CCDC188-201ENST00000439765 LRRC4BQ9NT99 713 aa23.83■■□□□ 1.41
CCDC188-201ENST00000439765 PPP1R1BQ9UD71 204 aaPredicted RBP23.83■■□□□ 1.41
CCDC188-201ENST00000439765 COL24A1Q17RW2 1714 aa23.83■■□□□ 1.41
CCDC188-201ENST00000439765 TAF1LQ8IZX4 1826 aa23.82■■□□□ 1.4
CCDC188-201ENST00000439765 PRIM1P49642 420 aaKnown RBP23.82■■□□□ 1.4
CCDC188-201ENST00000439765 DIAPH1O60610 1272 aaKnown RBP23.81■■□□□ 1.4
CCDC188-201ENST00000439765 KDRP35968 1356 aa23.81■■□□□ 1.4
CCDC188-201ENST00000439765 SYTL4Q96C24 671 aaPredicted RBP23.81■■□□□ 1.4
CCDC188-201ENST00000439765 ZBTB7AO95365 584 aa23.8■■□□□ 1.4
CCDC188-201ENST00000439765 SULT6B1Q6IMI4 303 aa23.8■■□□□ 1.4
CCDC188-201ENST00000439765 PTGER2P43116 358 aa23.79■■□□□ 1.4
CCDC188-201ENST00000439765 VIRMAQ69YN4 1812 aaKnown RBP23.78■■□□□ 1.4
CCDC188-201ENST00000439765 CYP27B1O15528 508 aa23.78■■□□□ 1.4
CCDC188-201ENST00000439765 ZNF827Q17R98 1081 aa23.78■■□□□ 1.4
CCDC188-201ENST00000439765 MTFR1LQ9H019 292 aa23.78■■□□□ 1.4
CCDC188-201ENST00000439765 SPG7Q9UQ90 795 aa23.78■■□□□ 1.4
CCDC188-201ENST00000439765 C5P01031 1676 aa23.78■■□□□ 1.4
CCDC188-201ENST00000439765 HMOX1P09601 288 aa23.77■■□□□ 1.4
CCDC188-201ENST00000439765 AKT1S1Q96B36 256 aa23.77■■□□□ 1.4
CCDC188-201ENST00000439765 CFAP53Q96M91 514 aa23.77■■□□□ 1.4
CCDC188-201ENST00000439765 PLEKHG2Q9H7P9 1386 aa23.77■■□□□ 1.4
CCDC188-201ENST00000439765 U2SURPO15042 1029 aaKnown RBP23.75■■□□□ 1.39
CCDC188-201ENST00000439765 SGIP1Q9BQI5 828 aa23.75■■□□□ 1.39
CCDC188-201ENST00000439765 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.75■■□□□ 1.39
CCDC188-201ENST00000439765 ATF5Q9Y2D1 282 aaPredicted RBP23.74■■□□□ 1.39
CCDC188-201ENST00000439765 DIEXFQ68CQ4 756 aaKnown RBP23.73■■□□□ 1.39
CCDC188-201ENST00000439765 PHKG2P15735 406 aa23.71■■□□□ 1.39
CCDC188-201ENST00000439765 SCN11AQ9UI33 1791 aa23.71■■□□□ 1.39
CCDC188-201ENST00000439765 RALBP1Q15311 655 aa23.7■■□□□ 1.38
CCDC188-201ENST00000439765 PLEKHO1Q53GL0 409 aaPredicted RBP23.7■■□□□ 1.38
CCDC188-201ENST00000439765 ZNF530Q6P9A1 599 aaPredicted RBP23.7■■□□□ 1.38
CCDC188-201ENST00000439765 CCNL1Q9UK58 526 aaPredicted RBP23.7■■□□□ 1.38
CCDC188-201ENST00000439765 KCNQ4P56696 695 aa23.69■■□□□ 1.38
CCDC188-201ENST00000439765 NKX1-1Q15270 411 aaPredicted RBP23.69■■□□□ 1.38
CCDC188-201ENST00000439765 IFNL2Q8IZJ0 200 aa23.69■■□□□ 1.38
CCDC188-201ENST00000439765 SLC16A10Q8TF71 515 aa23.69■■□□□ 1.38
CCDC188-201ENST00000439765 PNPLA7Q6ZV29 1317 aa23.69■■□□□ 1.38
CCDC188-201ENST00000439765 AMOTQ4VCS5 1084 aa23.68■■□□□ 1.38
CCDC188-201ENST00000439765 CHD4Q14839 1912 aa23.67■■□□□ 1.38
CCDC188-201ENST00000439765 UBR3Q6ZT12 1888 aa23.66■■□□□ 1.38
CCDC188-201ENST00000439765 PALLDQ8WX93 1383 aa23.66■■□□□ 1.38
CCDC188-201ENST00000439765 KDM6AO15550 1401 aaPredicted RBP23.66■■□□□ 1.38
CCDC188-201ENST00000439765 NUDCQ9Y266 331 aa23.66■■□□□ 1.38
CCDC188-201ENST00000439765 MYBBP1AQ9BQG0 1328 aaKnown RBP23.66■■□□□ 1.38
CCDC188-201ENST00000439765 MAP3K5Q99683 1374 aa23.65■■□□□ 1.38
CCDC188-201ENST00000439765 C4BP0C0L5 1744 aa23.65■■□□□ 1.38
CCDC188-201ENST00000439765 MPRIPQ6WCQ1 1025 aa23.65■■□□□ 1.38
CCDC188-201ENST00000439765 TFCP2L1Q9NZI6 479 aa23.65■■□□□ 1.38
CCDC188-201ENST00000439765 U2AF1L5P0DN76 240 aaPredicted RBP23.64■■□□□ 1.38
CCDC188-201ENST00000439765 HMGB2P26583 209 aaKnown RBP23.64■■□□□ 1.38
CCDC188-201ENST00000439765 U2AF1Q01081 240 aaKnown RBP eCLIP23.64■■□□□ 1.38
CCDC188-201ENST00000439765 C1orf141Q5JVX7 400 aa23.64■■□□□ 1.38
CCDC188-201ENST00000439765 FHDC1Q9C0D6 1143 aaPredicted RBP23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms