RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 RAPGEF4Q8WZA2 1011 aa15.37■□□□□ 0.05
SNHG3-202ENST00000437681 NCBP3Q53F19 620 aaKnown RBP15.37■□□□□ 0.05
SNHG3-202ENST00000437681 EXOC5O00471 708 aa15.36■□□□□ 0.05
SNHG3-202ENST00000437681 PLEKHG5O94827 1062 aa15.36■□□□□ 0.05
SNHG3-202ENST00000437681 FCHSD2O94868 740 aa15.36■□□□□ 0.05
SNHG3-202ENST00000437681 FBLN1P23142 703 aa15.36■□□□□ 0.05
SNHG3-202ENST00000437681 HMGB2P26583 209 aaKnown RBP15.36■□□□□ 0.05
SNHG3-202ENST00000437681 TNNT2P45379 298 aaPredicted RBP15.36■□□□□ 0.05
SNHG3-202ENST00000437681 DDB1Q16531 1140 aa15.36■□□□□ 0.05
SNHG3-202ENST00000437681 KRT27Q7Z3Y8 459 aa15.36■□□□□ 0.05
SNHG3-202ENST00000437681 SPG7Q9UQ90 795 aa15.36■□□□□ 0.05
SNHG3-202ENST00000437681 PCDH11XQ9BZA7 1347 aa15.36■□□□□ 0.05
SNHG3-202ENST00000437681 PCDH11YQ9BZA8 1340 aa15.36■□□□□ 0.05
SNHG3-202ENST00000437681 FAM98CQ17RN3 349 aaKnown RBP15.36■□□□□ 0.05
SNHG3-202ENST00000437681 NKX1-1Q15270 411 aaPredicted RBP15.35■□□□□ 0.05
SNHG3-202ENST00000437681 PPM1GO15355 546 aaPredicted RBP15.35■□□□□ 0.05
SNHG3-202ENST00000437681 FAM196AQ6ZSG2 479 aa15.35■□□□□ 0.05
SNHG3-202ENST00000437681 HSP90AB1P08238 724 aaKnown RBP15.34■□□□□ 0.05
SNHG3-202ENST00000437681 TNS1Q9HBL0 1735 aaKnown RBP15.34■□□□□ 0.05
SNHG3-202ENST00000437681 PLEKHO1Q53GL0 409 aaPredicted RBP15.34■□□□□ 0.05
SNHG3-202ENST00000437681 ZCRB1Q8TBF4 217 aaKnown RBP15.34■□□□□ 0.05
SNHG3-202ENST00000437681 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
SNHG3-202ENST00000437681 ZNF831Q5JPB2 1677 aa15.34■□□□□ 0.05
SNHG3-202ENST00000437681 PDE3BQ13370 1112 aa15.33■□□□□ 0.04
SNHG3-202ENST00000437681 CCER2I3L3R5 266 aa15.32■□□□□ 0.04
SNHG3-202ENST00000437681 SCN11AQ9UI33 1791 aa15.32■□□□□ 0.04
SNHG3-202ENST00000437681 LTV1Q96GA3 475 aaPredicted RBP15.32■□□□□ 0.04
SNHG3-202ENST00000437681 CICQ96RK0 1608 aaPredicted RBP15.31■□□□□ 0.04
SNHG3-202ENST00000437681 MRC1P22897 1456 aa15.31■□□□□ 0.04
SNHG3-202ENST00000437681 HTATSF1O43719 755 aaKnown RBP15.31■□□□□ 0.04
SNHG3-202ENST00000437681 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
SNHG3-202ENST00000437681 VIRMAQ69YN4 1812 aaKnown RBP15.3■□□□□ 0.04
SNHG3-202ENST00000437681 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
SNHG3-202ENST00000437681 DOT1LQ8TEK3 1739 aa15.29■□□□□ 0.04
SNHG3-202ENST00000437681 SULT6B1Q6IMI4 303 aa15.29■□□□□ 0.04
SNHG3-202ENST00000437681 IFNL2Q8IZJ0 200 aa15.29■□□□□ 0.04
SNHG3-202ENST00000437681 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
SNHG3-202ENST00000437681 SIPA1L3O60292 1781 aaPredicted RBP15.27■□□□□ 0.04
SNHG3-202ENST00000437681 AKAP4Q5JQC9 854 aa15.27■□□□□ 0.04
SNHG3-202ENST00000437681 TOGARAM1Q9Y4F4 1720 aa15.27■□□□□ 0.03
SNHG3-202ENST00000437681 PAPPAQ13219 1627 aa15.27■□□□□ 0.03
SNHG3-202ENST00000437681 ITGB4P16144 1822 aa15.27■□□□□ 0.03
SNHG3-202ENST00000437681 RREB1Q92766 1687 aa15.27■□□□□ 0.03
SNHG3-202ENST00000437681 NEFMP07197 916 aa15.26■□□□□ 0.03
SNHG3-202ENST00000437681 MARCH10Q8NA82 808 aaPredicted RBP15.26■□□□□ 0.03
SNHG3-202ENST00000437681 USP35Q9P2H5 1018 aa15.26■□□□□ 0.03
SNHG3-202ENST00000437681 ERVV-2B6SEH9 535 aa15.26■□□□□ 0.03
SNHG3-202ENST00000437681 BCL11BQ9C0K0 894 aaPredicted RBP15.26■□□□□ 0.03
SNHG3-202ENST00000437681 PHKG2P15735 406 aa15.25■□□□□ 0.03
SNHG3-202ENST00000437681 DCAF5Q96JK2 942 aa15.25■□□□□ 0.03
SNHG3-202ENST00000437681 LY75O60449 1722 aa15.25■□□□□ 0.03
SNHG3-202ENST00000437681 PLEKHF1Q96S99 279 aa15.25■□□□□ 0.03
SNHG3-202ENST00000437681 WDR43Q15061 677 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNHG3-202ENST00000437681 ILDR2Q71H61 639 aa15.24■□□□□ 0.03
SNHG3-202ENST00000437681 BTAF1O14981 1849 aa15.24■□□□□ 0.03
SNHG3-202ENST00000437681 U2AF1L5P0DN76 240 aaPredicted RBP15.24■□□□□ 0.03
SNHG3-202ENST00000437681 U2AF1Q01081 240 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNHG3-202ENST00000437681 SOCS7O14512 581 aa15.23■□□□□ 0.03
SNHG3-202ENST00000437681 USHBP1Q8N6Y0 703 aa15.23■□□□□ 0.03
SNHG3-202ENST00000437681 MAP3K5Q99683 1374 aa15.23■□□□□ 0.03
SNHG3-202ENST00000437681 U2SURPO15042 1029 aaKnown RBP15.23■□□□□ 0.03
SNHG3-202ENST00000437681 C1orf141Q5JVX7 400 aa15.23■□□□□ 0.03
SNHG3-202ENST00000437681 DLG5Q8TDM6 1919 aa15.22■□□□□ 0.03
SNHG3-202ENST00000437681 A0A0G2JS52 829 aa15.22■□□□□ 0.03
SNHG3-202ENST00000437681 CYP27B1O15528 508 aa15.22■□□□□ 0.03
SNHG3-202ENST00000437681 LMOD3Q0VAK6 560 aa15.22■□□□□ 0.03
SNHG3-202ENST00000437681 AEBP1Q8IUX7 1158 aa15.22■□□□□ 0.03
SNHG3-202ENST00000437681 RUNDC1Q96C34 613 aa15.22■□□□□ 0.03
SNHG3-202ENST00000437681 QSER1Q2KHR3 1735 aa15.21■□□□□ 0.03
SNHG3-202ENST00000437681 PLSCR1O15162 318 aa15.21■□□□□ 0.03
SNHG3-202ENST00000437681 BABAM1Q9NWV8 329 aa15.21■□□□□ 0.03
SNHG3-202ENST00000437681 CEMIPQ8WUJ3 1361 aa15.21■□□□□ 0.03
SNHG3-202ENST00000437681 PNISRQ8TF01 805 aaKnown RBP15.21■□□□□ 0.03
SNHG3-202ENST00000437681 PRKAR2BP31323 418 aa15.2■□□□□ 0.02
SNHG3-202ENST00000437681 DIEXFQ68CQ4 756 aaKnown RBP15.2■□□□□ 0.02
SNHG3-202ENST00000437681 ZNF530Q6P9A1 599 aaPredicted RBP15.2■□□□□ 0.02
SNHG3-202ENST00000437681 UPF1Q92900 1129 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNHG3-202ENST00000437681 UBR2Q8IWV8 1755 aa15.2■□□□□ 0.02
SNHG3-202ENST00000437681 KDM6AO15550 1401 aaPredicted RBP15.19■□□□□ 0.02
SNHG3-202ENST00000437681 SMARCC1Q92922 1105 aaPredicted RBP15.19■□□□□ 0.02
SNHG3-202ENST00000437681 MAPK8IP3Q9UPT6 1336 aa15.19■□□□□ 0.02
SNHG3-202ENST00000437681 NFE2L2Q16236 605 aa15.19■□□□□ 0.02
SNHG3-202ENST00000437681 GNAT3A8MTJ3 354 aa15.18■□□□□ 0.02
SNHG3-202ENST00000437681 SF3B2Q13435 895 aaKnown RBP15.18■□□□□ 0.02
SNHG3-202ENST00000437681 MTHFSDQ2M296 383 aaKnown RBP15.18■□□□□ 0.02
SNHG3-202ENST00000437681 HMOX1P09601 288 aa15.17■□□□□ 0.02
SNHG3-202ENST00000437681 CCDC27Q2M243 656 aa15.17■□□□□ 0.02
SNHG3-202ENST00000437681 C5P01031 1676 aa15.17■□□□□ 0.02
SNHG3-202ENST00000437681 BAG6P46379 1132 aa15.17■□□□□ 0.02
SNHG3-202ENST00000437681 MRS2Q9HD23 443 aa15.17■□□□□ 0.02
SNHG3-202ENST00000437681 NUP188Q5SRE5 1749 aa15.16■□□□□ 0.02
SNHG3-202ENST00000437681 KDM3BQ7LBC6 1761 aa15.16■□□□□ 0.02
SNHG3-202ENST00000437681 RNMTO43148 476 aaKnown RBP15.15■□□□□ 0.02
SNHG3-202ENST00000437681 SLC27A3Q5K4L6 730 aa15.15■□□□□ 0.02
SNHG3-202ENST00000437681 DDX54Q8TDD1 881 aaKnown RBP15.15■□□□□ 0.02
SNHG3-202ENST00000437681 CALD1Q05682 793 aaKnown RBP15.14■□□□□ 0.01
SNHG3-202ENST00000437681 ADAMTS8Q9UP79 889 aa15.14■□□□□ 0.01
SNHG3-202ENST00000437681 CENPBP07199 599 aaPredicted RBP15.13■□□□□ 0.01
SNHG3-202ENST00000437681 SLC52A2Q9HAB3 445 aa15.13■□□□□ 0.01
SNHG3-202ENST00000437681 TAF1LQ8IZX4 1826 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms