RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 VAMP4O75379 141 aa19.68■□□□□ 0.74
SGCE-205ENST00000437425 AMOTQ4VCS5 1084 aa19.68■□□□□ 0.74
SGCE-205ENST00000437425 FTSJ3Q8IY81 847 aaKnown RBP19.68■□□□□ 0.74
SGCE-205ENST00000437425 DZIP1LQ8IYY4 767 aaKnown RBP19.68■□□□□ 0.74
SGCE-205ENST00000437425 ARHGAP45Q92619 1136 aa19.68■□□□□ 0.74
SGCE-205ENST00000437425 MAP3K5Q99683 1374 aa19.68■□□□□ 0.74
SGCE-205ENST00000437425 CRB1P82279 1406 aa19.67■□□□□ 0.74
SGCE-205ENST00000437425 TWISTNBQ3B726 338 aaPredicted RBP19.67■□□□□ 0.74
SGCE-205ENST00000437425 ATF7IPQ6VMQ6 1270 aa19.67■□□□□ 0.74
SGCE-205ENST00000437425 SOS1Q07889 1333 aaPredicted RBP19.67■□□□□ 0.74
SGCE-205ENST00000437425 CAMTA1Q9Y6Y1 1673 aa19.67■□□□□ 0.74
SGCE-205ENST00000437425 NBPF6Q5VWK0 638 aa19.66■□□□□ 0.74
SGCE-205ENST00000437425 ANKRD24Q8TF21 1146 aa19.66■□□□□ 0.74
SGCE-205ENST00000437425 NBPF4Q96M43 638 aa19.66■□□□□ 0.74
SGCE-205ENST00000437425 CHMP4BQ9H444 224 aaKnown RBP19.66■□□□□ 0.74
SGCE-205ENST00000437425 TSHZ2Q9NRE2 1034 aa19.66■□□□□ 0.74
SGCE-205ENST00000437425 SOS2Q07890 1332 aaPredicted RBP19.66■□□□□ 0.74
SGCE-205ENST00000437425 CPDO75976 1380 aa19.66■□□□□ 0.74
SGCE-205ENST00000437425 DCTN1Q14203 1278 aa19.66■□□□□ 0.74
SGCE-205ENST00000437425 BCL2L13Q9BXK5 485 aa19.66■□□□□ 0.74
SGCE-205ENST00000437425 ZBTB7CA1YPR0 619 aa19.65■□□□□ 0.74
SGCE-205ENST00000437425 PLEKHO1Q53GL0 409 aaPredicted RBP19.65■□□□□ 0.74
SGCE-205ENST00000437425 MCM10Q7L590 875 aa19.65■□□□□ 0.74
SGCE-205ENST00000437425 CLUAP1Q96AJ1 413 aa19.65■□□□□ 0.74
SGCE-205ENST00000437425 LRRC37A3O60309 1634 aa19.64■□□□□ 0.73
SGCE-205ENST00000437425 MVPQ14764 893 aaKnown RBP19.64■□□□□ 0.73
SGCE-205ENST00000437425 PANK1Q8TE04 598 aa19.64■□□□□ 0.73
SGCE-205ENST00000437425 DDX19BQ9UMR2 479 aa19.63■□□□□ 0.73
SGCE-205ENST00000437425 COG6Q9Y2V7 657 aa19.63■□□□□ 0.73
SGCE-205ENST00000437425 ERBB3P21860 1342 aa19.63■□□□□ 0.73
SGCE-205ENST00000437425 FAM208AQ9UK61 1670 aaKnown RBP19.63■□□□□ 0.73
SGCE-205ENST00000437425 NOB1Q9ULX3 412 aaKnown RBP19.62■□□□□ 0.73
SGCE-205ENST00000437425 KDM2BQ8NHM5 1336 aa19.62■□□□□ 0.73
SGCE-205ENST00000437425 OVOS2A0A0G2JMS6 1433 aa19.61■□□□□ 0.73
SGCE-205ENST00000437425 TRIM27P14373 513 aa19.61■□□□□ 0.73
SGCE-205ENST00000437425 CHMP4AQ9BY43 222 aa19.61■□□□□ 0.73
SGCE-205ENST00000437425 CRYBG1Q9Y4K1 1723 aa19.61■□□□□ 0.73
SGCE-205ENST00000437425 TCERG1O14776 1098 aaKnown RBP19.61■□□□□ 0.73
SGCE-205ENST00000437425 AKAP4Q5JQC9 854 aa19.61■□□□□ 0.73
SGCE-205ENST00000437425 MRPL50Q8N5N7 158 aaKnown RBP19.61■□□□□ 0.73
SGCE-205ENST00000437425 TSPYL4Q9UJ04 414 aa19.61■□□□□ 0.73
SGCE-205ENST00000437425 ZC3H6P61129 1189 aaKnown RBP19.6■□□□□ 0.73
SGCE-205ENST00000437425 C8orf58Q8NAV2 365 aa19.6■□□□□ 0.73
SGCE-205ENST00000437425 DDX17Q92841 729 aaKnown RBP19.6■□□□□ 0.73
SGCE-205ENST00000437425 LMO7Q8WWI1 1683 aa19.6■□□□□ 0.73
SGCE-205ENST00000437425 TAF7Q15545 349 aaPredicted RBP19.59■□□□□ 0.73
SGCE-205ENST00000437425 TSPYL6Q8N831 410 aa19.59■□□□□ 0.73
SGCE-205ENST00000437425 API5Q9BZZ5 524 aaKnown RBP19.59■□□□□ 0.73
SGCE-205ENST00000437425 LTBP4Q8N2S1 1624 aa19.59■□□□□ 0.73
SGCE-205ENST00000437425 CEMIPQ8WUJ3 1361 aa19.58■□□□□ 0.73
SGCE-205ENST00000437425 NHSL1Q5SYE7 1610 aa19.58■□□□□ 0.73
SGCE-205ENST00000437425 RLBP1P12271 317 aa19.58■□□□□ 0.73
SGCE-205ENST00000437425 USHBP1Q8N6Y0 703 aa19.58■□□□□ 0.73
SGCE-205ENST00000437425 AXIN2Q9Y2T1 843 aa19.58■□□□□ 0.73
SGCE-205ENST00000437425 COL18A1P39060 1754 aa19.58■□□□□ 0.72
SGCE-205ENST00000437425 LRRC59Q96AG4 307 aaKnown RBP19.57■□□□□ 0.72
SGCE-205ENST00000437425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.57■□□□□ 0.722e-6■□□□□ 8.1
SGCE-205ENST00000437425 C1orf141Q5JVX7 400 aa19.56■□□□□ 0.72
SGCE-205ENST00000437425 IL17REQ8NFR9 667 aa19.56■□□□□ 0.72
SGCE-205ENST00000437425 RGPD2P0DJD1 1756 aa19.55■□□□□ 0.72
SGCE-205ENST00000437425 ZNF530Q6P9A1 599 aaPredicted RBP19.55■□□□□ 0.72
SGCE-205ENST00000437425 RAPGEF4Q8WZA2 1011 aa19.55■□□□□ 0.72
SGCE-205ENST00000437425 PTPRCP08575 1304 aa19.54■□□□□ 0.72
SGCE-205ENST00000437425 RWDD1Q9H446 243 aaPredicted RBP19.54■□□□□ 0.72
SGCE-205ENST00000437425 ELL2O00472 640 aaPredicted RBP19.53■□□□□ 0.72
SGCE-205ENST00000437425 ITPRIPQ8IWB1 547 aa19.53■□□□□ 0.72
SGCE-205ENST00000437425 RGPD5Q99666 1765 aa19.52■□□□□ 0.72
SGCE-205ENST00000437425 PLEKHG5O94827 1062 aa19.52■□□□□ 0.72
SGCE-205ENST00000437425 TATP17735 454 aaPredicted RBP19.52■□□□□ 0.72
SGCE-205ENST00000437425 ABCC4O15439 1325 aa19.52■□□□□ 0.71
SGCE-205ENST00000437425 CSB-PGBD3P0DP91 1061 aa19.51■□□□□ 0.71
SGCE-205ENST00000437425 TMEM57Q8N5G2 664 aa19.51■□□□□ 0.71
SGCE-205ENST00000437425 CABLES1Q8TDN4 633 aa19.51■□□□□ 0.71
SGCE-205ENST00000437425 NLRP2Q9NX02 1062 aa19.51■□□□□ 0.71
SGCE-205ENST00000437425 SPG7Q9UQ90 795 aa19.51■□□□□ 0.71
SGCE-205ENST00000437425 HOXB7P09629 217 aa19.51■□□□□ 0.71
SGCE-205ENST00000437425 TEFQ10587 303 aa19.51■□□□□ 0.71
SGCE-205ENST00000437425 TNNQ9UQP3 1299 aa19.51■□□□□ 0.71
SGCE-205ENST00000437425 CCDC30Q5VVM6 783 aa19.5■□□□□ 0.71
SGCE-205ENST00000437425 PRDM11Q9NQV5 511 aa19.5■□□□□ 0.71
SGCE-205ENST00000437425 STK31Q9BXU1 1019 aa19.49■□□□□ 0.71
SGCE-205ENST00000437425 ZBTB40Q9NUA8 1239 aa19.48■□□□□ 0.71
SGCE-205ENST00000437425 RNMTO43148 476 aaKnown RBP19.47■□□□□ 0.71
SGCE-205ENST00000437425 HDAC1Q13547 482 aaPredicted RBP19.47■□□□□ 0.71
SGCE-205ENST00000437425 RBM19Q9Y4C8 960 aaKnown RBP19.47■□□□□ 0.71
SGCE-205ENST00000437425 AHDC1Q5TGY3 1603 aaPredicted RBP19.47■□□□□ 0.71
SGCE-205ENST00000437425 WDR17Q8IZU2 1322 aa19.47■□□□□ 0.71
SGCE-205ENST00000437425 ADAMTS7Q9UKP4 1686 aa19.47■□□□□ 0.71
SGCE-205ENST00000437425 ABCA3Q99758 1704 aa19.47■□□□□ 0.71
SGCE-205ENST00000437425 HSP90AB1P08238 724 aaKnown RBP19.46■□□□□ 0.71
SGCE-205ENST00000437425 MIS18AQ9NYP9 233 aa19.46■□□□□ 0.71
SGCE-205ENST00000437425 CHRNA2Q15822 529 aa19.46■□□□□ 0.71
SGCE-205ENST00000437425 PCDHB15Q9Y5E8 787 aa19.46■□□□□ 0.71
SGCE-205ENST00000437425 CACNA1FO60840 1977 aa19.45■□□□□ 0.7
SGCE-205ENST00000437425 UBAP1LF5GYI3 381 aa19.45■□□□□ 0.7
SGCE-205ENST00000437425 IGHDP01880 384 aa19.45■□□□□ 0.7
SGCE-205ENST00000437425 INTS3Q68E01 1043 aaKnown RBP19.45■□□□□ 0.7
SGCE-205ENST00000437425 KDM3BQ7LBC6 1761 aa19.44■□□□□ 0.7
SGCE-205ENST00000437425 SLC4A2P04920 1241 aa19.44■□□□□ 0.7
SGCE-205ENST00000437425 KRT24Q2M2I5 525 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms