RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 BAG6P46379 1132 aa28.41■■■□□ 2.14
GTF3A-203ENST00000435781 IGSF1Q8N6C5 1336 aa28.41■■■□□ 2.14
GTF3A-203ENST00000435781 DDX54Q8TDD1 881 aaKnown RBP28.39■■■□□ 2.14
GTF3A-203ENST00000435781 DOT1LQ8TEK3 1739 aa28.38■■■□□ 2.13
GTF3A-203ENST00000435781 DDX10Q13206 875 aaKnown RBP28.37■■■□□ 2.13
GTF3A-203ENST00000435781 RGPD3A6NKT7 1758 aaPredicted RBP28.37■■■□□ 2.13
GTF3A-203ENST00000435781 RGPD4Q7Z3J3 1758 aa28.37■■■□□ 2.13
GTF3A-203ENST00000435781 COL3A1P02461 1466 aaPredicted RBP28.36■■■□□ 2.13
GTF3A-203ENST00000435781 APBA3O96018 575 aa28.36■■■□□ 2.13
GTF3A-203ENST00000435781 IL13P35225 146 aa28.36■■■□□ 2.13
GTF3A-203ENST00000435781 EN1Q05925 392 aaPredicted RBP28.35■■■□□ 2.13
GTF3A-203ENST00000435781 PTF1AQ7RTS3 328 aa28.35■■■□□ 2.13
GTF3A-203ENST00000435781 BCL11BQ9C0K0 894 aaPredicted RBP28.35■■■□□ 2.13
GTF3A-203ENST00000435781 BTAF1O14981 1849 aa28.34■■■□□ 2.13
GTF3A-203ENST00000435781 RREB1Q92766 1687 aa28.34■■■□□ 2.13
GTF3A-203ENST00000435781 PCDH11XQ9BZA7 1347 aa28.32■■■□□ 2.12
GTF3A-203ENST00000435781 PCDH11YQ9BZA8 1340 aa28.32■■■□□ 2.12
GTF3A-203ENST00000435781 KCNQ2O43526 872 aa28.31■■■□□ 2.12
GTF3A-203ENST00000435781 ACSBG1Q96GR2 724 aa28.31■■■□□ 2.12
GTF3A-203ENST00000435781 PLEKHG2Q9H7P9 1386 aa28.31■■■□□ 2.12
GTF3A-203ENST00000435781 PARD3Q8TEW0 1356 aa28.3■■■□□ 2.12
GTF3A-203ENST00000435781 PPP2R1AP30153 589 aa28.3■■■□□ 2.12
GTF3A-203ENST00000435781 AEBP1Q8IUX7 1158 aa28.3■■■□□ 2.12
GTF3A-203ENST00000435781 CAMKK2Q96RR4 588 aa28.3■■■□□ 2.12
GTF3A-203ENST00000435781 KDRP35968 1356 aa28.29■■■□□ 2.12
GTF3A-203ENST00000435781 DIAPH1O60610 1272 aaKnown RBP28.29■■■□□ 2.12
GTF3A-203ENST00000435781 EZH2Q15910 746 aaKnown RBP28.29■■■□□ 2.12
GTF3A-203ENST00000435781 NUP188Q5SRE5 1749 aa28.29■■■□□ 2.12
GTF3A-203ENST00000435781 CYP27B1O15528 508 aa28.28■■■□□ 2.12
GTF3A-203ENST00000435781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.28■■■□□ 2.122e-7■□□□□ 11.1
GTF3A-203ENST00000435781 SPG7Q9UQ90 795 aa28.28■■■□□ 2.12
GTF3A-203ENST00000435781 TOGARAM1Q9Y4F4 1720 aa28.28■■■□□ 2.12
GTF3A-203ENST00000435781 ITGB4P16144 1822 aa28.27■■■□□ 2.12
GTF3A-203ENST00000435781 SULT6B1Q6IMI4 303 aa28.27■■■□□ 2.12
GTF3A-203ENST00000435781 PLSCR1O15162 318 aa28.23■■■□□ 2.11
GTF3A-203ENST00000435781 CFAP53Q96M91 514 aa28.23■■■□□ 2.11
GTF3A-203ENST00000435781 PRIM1P49642 420 aaKnown RBP28.21■■■□□ 2.11
GTF3A-203ENST00000435781 HMOX1P09601 288 aa28.2■■■□□ 2.1
GTF3A-203ENST00000435781 ZNF316A6NFI3 1004 aaPredicted RBP28.19■■■□□ 2.1
GTF3A-203ENST00000435781 NKX1-1Q15270 411 aaPredicted RBP28.19■■■□□ 2.1
GTF3A-203ENST00000435781 PLEKHO1Q53GL0 409 aaPredicted RBP28.19■■■□□ 2.1
GTF3A-203ENST00000435781 SYTL4Q96C24 671 aaPredicted RBP28.19■■■□□ 2.1
GTF3A-203ENST00000435781 PHKG2P15735 406 aa28.18■■■□□ 2.1
GTF3A-203ENST00000435781 IFNL2Q8IZJ0 200 aa28.18■■■□□ 2.1
GTF3A-203ENST00000435781 VIRMAQ69YN4 1812 aaKnown RBP28.18■■■□□ 2.1
GTF3A-203ENST00000435781 U2SURPO15042 1029 aaKnown RBP28.17■■■□□ 2.1
GTF3A-203ENST00000435781 RALBP1Q15311 655 aa28.17■■■□□ 2.1
GTF3A-203ENST00000435781 AMOTQ4VCS5 1084 aa28.17■■■□□ 2.1
GTF3A-203ENST00000435781 LY75O60449 1722 aa28.16■■■□□ 2.1
GTF3A-203ENST00000435781 ZNF530Q6P9A1 599 aaPredicted RBP28.15■■■□□ 2.1
GTF3A-203ENST00000435781 PROM2Q8N271 834 aa28.14■■■□□ 2.1
GTF3A-203ENST00000435781 SCN11AQ9UI33 1791 aa28.12■■■□□ 2.09
GTF3A-203ENST00000435781 TXNRD1Q16881 649 aa28.12■■■□□ 2.09
GTF3A-203ENST00000435781 NUDCQ9Y266 331 aa28.12■■■□□ 2.09
GTF3A-203ENST00000435781 KDM6AO15550 1401 aaPredicted RBP28.09■■■□□ 2.09
GTF3A-203ENST00000435781 HSP90AB1P08238 724 aaKnown RBP28.08■■■□□ 2.09
GTF3A-203ENST00000435781 C1orf141Q5JVX7 400 aa28.08■■■□□ 2.09
GTF3A-203ENST00000435781 MPRIPQ6WCQ1 1025 aa28.08■■■□□ 2.09
GTF3A-203ENST00000435781 DCAF5Q96JK2 942 aa28.07■■■□□ 2.08
GTF3A-203ENST00000435781 MYBBP1AQ9BQG0 1328 aaKnown RBP28.07■■■□□ 2.08
GTF3A-203ENST00000435781 PAPPAQ13219 1627 aa28.07■■■□□ 2.08
GTF3A-203ENST00000435781 PSDA5PKW4 1024 aaPredicted RBP28.05■■■□□ 2.08
GTF3A-203ENST00000435781 U2AF1L5P0DN76 240 aaPredicted RBP28.05■■■□□ 2.08
GTF3A-203ENST00000435781 U2AF1Q01081 240 aaKnown RBP eCLIP28.05■■■□□ 2.08
GTF3A-203ENST00000435781 RSPH6AQ9H0K4 717 aa28.05■■■□□ 2.08
GTF3A-203ENST00000435781 R3HDM1Q15032 1099 aaKnown RBP28.04■■■□□ 2.08
GTF3A-203ENST00000435781 MTHFSDQ2M296 383 aaKnown RBP28.04■■■□□ 2.08
GTF3A-203ENST00000435781 NBPF14Q5TI25 921 aa28.04■■■□□ 2.08
GTF3A-203ENST00000435781 PIGBQ92521 554 aa28.04■■■□□ 2.08
GTF3A-203ENST00000435781 PRKRIP1Q9H875 184 aaPredicted RBP28.04■■■□□ 2.08
GTF3A-203ENST00000435781 ANO8Q9HCE9 1232 aaPredicted RBP28.03■■■□□ 2.08
GTF3A-203ENST00000435781 TMOD3Q9NYL9 352 aa28.03■■■□□ 2.08
GTF3A-203ENST00000435781 ADAMTS7Q9UKP4 1686 aa28.03■■■□□ 2.08
GTF3A-203ENST00000435781 TAF1LQ8IZX4 1826 aa28.02■■■□□ 2.08
GTF3A-203ENST00000435781 ERVV-2B6SEH9 535 aa28.02■■■□□ 2.08
GTF3A-203ENST00000435781 PRKAR2BP31323 418 aa28.02■■■□□ 2.08
GTF3A-203ENST00000435781 AKAP4Q5JQC9 854 aa28.02■■■□□ 2.08
GTF3A-203ENST00000435781 LRRC4BQ9NT99 713 aa28.01■■■□□ 2.07
GTF3A-203ENST00000435781 SLC27A3Q5K4L6 730 aa28■■■□□ 2.07
GTF3A-203ENST00000435781 PALLDQ8WX93 1383 aa27.99■■■□□ 2.07
GTF3A-203ENST00000435781 FCHSD2O94868 740 aa27.99■■■□□ 2.07
GTF3A-203ENST00000435781 C5P01031 1676 aa27.98■■■□□ 2.07
GTF3A-203ENST00000435781 GAS2L2Q8NHY3 880 aa27.97■■■□□ 2.07
GTF3A-203ENST00000435781 SMARCC1Q92922 1105 aaPredicted RBP27.97■■■□□ 2.07
GTF3A-203ENST00000435781 PHACTR3Q96KR7 559 aa27.97■■■□□ 2.07
GTF3A-203ENST00000435781 KCNQ4P56696 695 aa27.96■■■□□ 2.07
GTF3A-203ENST00000435781 CCNL1Q9UK58 526 aaPredicted RBP27.96■■■□□ 2.07
GTF3A-203ENST00000435781 TUBGCP6Q96RT7 1819 aa27.96■■■□□ 2.07
GTF3A-203ENST00000435781 SRCAPQ6ZRS2 3230 aa27.96■■■□□ 2.07
GTF3A-203ENST00000435781 MRC1P22897 1456 aa27.95■■■□□ 2.07
GTF3A-203ENST00000435781 DLG5Q8TDM6 1919 aa27.95■■■□□ 2.06
GTF3A-203ENST00000435781 CABP4P57796 275 aa27.95■■■□□ 2.06
GTF3A-203ENST00000435781 ASAP1Q9ULH1 1129 aa27.95■■■□□ 2.06
GTF3A-203ENST00000435781 CASZ1Q86V15 1759 aa27.94■■■□□ 2.06
GTF3A-203ENST00000435781 LGR6Q9HBX8 967 aa27.94■■■□□ 2.06
GTF3A-203ENST00000435781 STK32BQ9NY57 414 aa27.94■■■□□ 2.06
GTF3A-203ENST00000435781 QSER1Q2KHR3 1735 aa27.94■■■□□ 2.06
GTF3A-203ENST00000435781 MAP3K5Q99683 1374 aa27.94■■■□□ 2.06
GTF3A-203ENST00000435781 RNMTO43148 476 aaKnown RBP27.93■■■□□ 2.06
GTF3A-203ENST00000435781 SIPA1L3O60292 1781 aaPredicted RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms