RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 CDCA8Q53HL2 280 aa31.16■■■□□ 2.58
HMG20B-205ENST00000435022 PCGF6Q9BYE7 350 aa31.16■■■□□ 2.58
HMG20B-205ENST00000435022 HSP90AB2PQ58FF8 381 aa31.14■■■□□ 2.58
HMG20B-205ENST00000435022 ATF5Q9Y2D1 282 aaPredicted RBP31.14■■■□□ 2.58
HMG20B-205ENST00000435022 ANKRD26Q9UPS8 1709 aa31.14■■■□□ 2.58
HMG20B-205ENST00000435022 INSRP06213 1382 aa31.14■■■□□ 2.58
HMG20B-205ENST00000435022 LY75O60449 1722 aa31.13■■■□□ 2.57
HMG20B-205ENST00000435022 ZCRB1Q8TBF4 217 aaKnown RBP31.12■■■□□ 2.57
HMG20B-205ENST00000435022 SGIP1Q9BQI5 828 aa31.12■■■□□ 2.57
HMG20B-205ENST00000435022 FLT4P35916 1363 aa31.12■■■□□ 2.57
HMG20B-205ENST00000435022 TUBGCP6Q96RT7 1819 aa31.12■■■□□ 2.57
HMG20B-205ENST00000435022 PRIM1P49642 420 aaKnown RBP31.1■■■□□ 2.57
HMG20B-205ENST00000435022 QSER1Q2KHR3 1735 aa31.1■■■□□ 2.57
HMG20B-205ENST00000435022 EMILIN1Q9Y6C2 1016 aa31.09■■■□□ 2.57
HMG20B-205ENST00000435022 SMG6Q86US8 1419 aaKnown RBP31.08■■■□□ 2.57
HMG20B-205ENST00000435022 KIF24Q5T7B8 1368 aa31.08■■■□□ 2.57
HMG20B-205ENST00000435022 KCNQ4P56696 695 aa31.07■■■□□ 2.56
HMG20B-205ENST00000435022 AKT1S1Q96B36 256 aa31.07■■■□□ 2.56
HMG20B-205ENST00000435022 MTFR1LQ9H019 292 aa31.06■■■□□ 2.56
HMG20B-205ENST00000435022 NCAPD2Q15021 1401 aa31.06■■■□□ 2.56
HMG20B-205ENST00000435022 SYTL4Q96C24 671 aaPredicted RBP31.05■■■□□ 2.56
HMG20B-205ENST00000435022 TOGARAM1Q9Y4F4 1720 aa31.04■■■□□ 2.56
HMG20B-205ENST00000435022 PKD1L3Q7Z443 1732 aa31.04■■■□□ 2.56
HMG20B-205ENST00000435022 SLC27A3Q5K4L6 730 aa31.03■■■□□ 2.56
HMG20B-205ENST00000435022 COL24A1Q17RW2 1714 aa31.02■■■□□ 2.56
HMG20B-205ENST00000435022 CGNL1Q0VF96 1302 aa31.01■■■□□ 2.56
HMG20B-205ENST00000435022 RAPGEF4Q8WZA2 1011 aa31.01■■■□□ 2.55
HMG20B-205ENST00000435022 MAP2P11137 1827 aaKnown RBP31.01■■■□□ 2.55
HMG20B-205ENST00000435022 TATP17735 454 aaPredicted RBP30.99■■■□□ 2.55
HMG20B-205ENST00000435022 FHDC1Q9C0D6 1143 aaPredicted RBP30.99■■■□□ 2.55
HMG20B-205ENST00000435022 PNPLA7Q6ZV29 1317 aa30.98■■■□□ 2.55
HMG20B-205ENST00000435022 CYP27B1O15528 508 aa30.96■■■□□ 2.55
HMG20B-205ENST00000435022 HSPA5P11021 654 aaKnown RBP30.95■■■□□ 2.55
HMG20B-205ENST00000435022 SYT17Q9BSW7 474 aa30.95■■■□□ 2.55
HMG20B-205ENST00000435022 PCDH11XQ9BZA7 1347 aa30.95■■■□□ 2.54
HMG20B-205ENST00000435022 PCDH11YQ9BZA8 1340 aa30.95■■■□□ 2.54
HMG20B-205ENST00000435022 WASHC2AQ641Q2 1341 aa30.94■■■□□ 2.54
HMG20B-205ENST00000435022 ITGB4P16144 1822 aa30.94■■■□□ 2.54
HMG20B-205ENST00000435022 POLKQ9UBT6 870 aa30.93■■■□□ 2.54
HMG20B-205ENST00000435022 PPM1GO15355 546 aaPredicted RBP30.92■■■□□ 2.54
HMG20B-205ENST00000435022 YY1P25490 414 aa30.92■■■□□ 2.54
HMG20B-205ENST00000435022 POLR3GLQ9BT43 218 aa30.92■■■□□ 2.54
HMG20B-205ENST00000435022 C5P01031 1676 aa30.91■■■□□ 2.54
HMG20B-205ENST00000435022 ARXQ96QS3 562 aa30.91■■■□□ 2.54
HMG20B-205ENST00000435022 CCNL1Q9UK58 526 aaPredicted RBP30.91■■■□□ 2.54
HMG20B-205ENST00000435022 TAF1LQ8IZX4 1826 aa30.89■■■□□ 2.54
HMG20B-205ENST00000435022 EYA1Q99502 592 aa30.89■■■□□ 2.54
HMG20B-205ENST00000435022 MAP3K5Q99683 1374 aa30.89■■■□□ 2.54
HMG20B-205ENST00000435022 EIF4G2P78344 907 aaKnown RBP eCLIP30.88■■■□□ 2.53
HMG20B-205ENST00000435022 TFCP2L1Q9NZI6 479 aa30.87■■■□□ 2.53
HMG20B-205ENST00000435022 SLC16A10Q8TF71 515 aa30.86■■■□□ 2.53
HMG20B-205ENST00000435022 PALLDQ8WX93 1383 aa30.85■■■□□ 2.53
HMG20B-205ENST00000435022 CCER1Q8TC90 406 aaPredicted RBP30.84■■■□□ 2.53
HMG20B-205ENST00000435022 TNNT2P45379 298 aaPredicted RBP30.83■■■□□ 2.53
HMG20B-205ENST00000435022 EIF4A2Q14240 407 aaKnown RBP30.82■■■□□ 2.52
HMG20B-205ENST00000435022 NKX1-1Q15270 411 aaPredicted RBP30.82■■■□□ 2.52
HMG20B-205ENST00000435022 MPRIPQ6WCQ1 1025 aa30.82■■■□□ 2.52
HMG20B-205ENST00000435022 PANK3Q9H999 370 aa30.82■■■□□ 2.52
HMG20B-205ENST00000435022 DCAF8L1A6NGE4 600 aa30.81■■■□□ 2.52
HMG20B-205ENST00000435022 COL23A1Q86Y22 540 aaPredicted RBP30.81■■■□□ 2.52
HMG20B-205ENST00000435022 C4BP0C0L5 1744 aa30.79■■■□□ 2.52
HMG20B-205ENST00000435022 PIGBQ92521 554 aa30.79■■■□□ 2.52
HMG20B-205ENST00000435022 UTRNP46939 3433 aa30.77■■■□□ 2.52
HMG20B-205ENST00000435022 AMIGO3Q86WK7 504 aa30.76■■■□□ 2.51
HMG20B-205ENST00000435022 SPG7Q9UQ90 795 aa30.76■■■□□ 2.51
HMG20B-205ENST00000435022 IGSF1Q8N6C5 1336 aa30.75■■■□□ 2.51
HMG20B-205ENST00000435022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.75■■■□□ 2.512e-6■■□□□ 11.9
HMG20B-205ENST00000435022 UBR3Q6ZT12 1888 aa30.74■■■□□ 2.51
HMG20B-205ENST00000435022 PHKG2P15735 406 aa30.73■■■□□ 2.51
HMG20B-205ENST00000435022 POLD1P28340 1107 aa30.72■■■□□ 2.51
HMG20B-205ENST00000435022 MSL1Q68DK7 614 aa30.71■■■□□ 2.51
HMG20B-205ENST00000435022 NLGN2Q8NFZ4 835 aa30.71■■■□□ 2.51
HMG20B-205ENST00000435022 KLHL34Q8N239 644 aa30.7■■■□□ 2.51
HMG20B-205ENST00000435022 CHD4Q14839 1912 aa30.7■■■□□ 2.51
HMG20B-205ENST00000435022 SMIM5Q71RC9 77 aa30.69■■■□□ 2.5
HMG20B-205ENST00000435022 SMARCC1Q92922 1105 aaPredicted RBP30.69■■■□□ 2.5
HMG20B-205ENST00000435022 PLEKHG2Q9H7P9 1386 aa30.68■■■□□ 2.5
HMG20B-205ENST00000435022 MSH5O43196 834 aa30.68■■■□□ 2.5
HMG20B-205ENST00000435022 IFNL2Q8IZJ0 200 aa30.67■■■□□ 2.5
HMG20B-205ENST00000435022 ASAP1Q9ULH1 1129 aa30.67■■■□□ 2.5
HMG20B-205ENST00000435022 LINC00116Q8NCU8 138 aa30.65■■■□□ 2.5
HMG20B-205ENST00000435022 TMOD3Q9NYL9 352 aa30.65■■■□□ 2.5
HMG20B-205ENST00000435022 LOC102724428A0A0B4J2F2 783 aa30.64■■■□□ 2.5
HMG20B-205ENST00000435022 SIK1P57059 783 aa30.64■■■□□ 2.5
HMG20B-205ENST00000435022 ITPK1Q13572 414 aa30.64■■■□□ 2.5
HMG20B-205ENST00000435022 AEBP1Q8IUX7 1158 aa30.63■■■□□ 2.49
HMG20B-205ENST00000435022 KIF7Q2M1P5 1343 aa30.63■■■□□ 2.49
HMG20B-205ENST00000435022 KDM6AO15550 1401 aaPredicted RBP30.63■■■□□ 2.49
HMG20B-205ENST00000435022 MORC1Q86VD1 984 aa30.62■■■□□ 2.49
HMG20B-205ENST00000435022 ZNF784Q8NCA9 323 aaPredicted RBP30.62■■■□□ 2.49
HMG20B-205ENST00000435022 KDRP35968 1356 aa30.62■■■□□ 2.49
HMG20B-205ENST00000435022 AMER1Q5JTC6 1135 aaPredicted RBP30.61■■■□□ 2.49
HMG20B-205ENST00000435022 ATG3Q9NT62 314 aa30.61■■■□□ 2.49
HMG20B-205ENST00000435022 AK7Q96M32 723 aa30.6■■■□□ 2.49
HMG20B-205ENST00000435022 GPR162Q16538 588 aa30.59■■■□□ 2.49
HMG20B-205ENST00000435022 FLAD1Q8NFF5 587 aa30.59■■■□□ 2.49
HMG20B-205ENST00000435022 PHF14O94880 888 aa30.58■■■□□ 2.49
HMG20B-205ENST00000435022 SLC4A9Q96Q91 983 aa30.58■■■□□ 2.49
HMG20B-205ENST00000435022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.57■■■□□ 2.48
HMG20B-205ENST00000435022 ZNF831Q5JPB2 1677 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms