RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 FAM193AP78312 1265 aa7.3□□□□□ -1.24
RFC3-202ENST00000434425 MEX3CQ5U5Q3 659 aaKnown RBP7.3□□□□□ -1.24
RFC3-202ENST00000434425 ZNF772Q68DY9 489 aaPredicted RBP7.3□□□□□ -1.24
RFC3-202ENST00000434425 KRI1Q8N9T8 703 aaKnown RBP7.3□□□□□ -1.24
RFC3-202ENST00000434425 SREK1Q8WXA9 508 aaKnown RBP7.3□□□□□ -1.24
RFC3-202ENST00000434425 UBA5Q9GZZ9 404 aa7.3□□□□□ -1.24
RFC3-202ENST00000434425 DAPK1P53355 1430 aa7.29□□□□□ -1.24
RFC3-202ENST00000434425 LMTK2Q8IWU2 1503 aa7.29□□□□□ -1.24
RFC3-202ENST00000434425 NWD1Q149M9 1564 aa7.29□□□□□ -1.24
RFC3-202ENST00000434425 LRP6O75581 1613 aa7.29□□□□□ -1.24
RFC3-202ENST00000434425 PTPN23Q9H3S7 1636 aa7.29□□□□□ -1.24
RFC3-202ENST00000434425 PLCG2P16885 1265 aa7.29□□□□□ -1.24
RFC3-202ENST00000434425 RXRBP28702 533 aa7.29□□□□□ -1.24
RFC3-202ENST00000434425 MICAL1Q8TDZ2 1067 aa7.29□□□□□ -1.24
RFC3-202ENST00000434425 C8orf37Q96NL8 207 aa7.29□□□□□ -1.24
RFC3-202ENST00000434425 TBX22Q9Y458 520 aa7.29□□□□□ -1.24
RFC3-202ENST00000434425 NKTRP30414 1462 aaKnown RBP7.29□□□□□ -1.24
RFC3-202ENST00000434425 COL16A1Q07092 1604 aaPredicted RBP7.28□□□□□ -1.24
RFC3-202ENST00000434425 NUTM2BA6NNL0 878 aaPredicted RBP7.28□□□□□ -1.24
RFC3-202ENST00000434425 NUTM2EB1AL46 878 aaPredicted RBP7.28□□□□□ -1.24
RFC3-202ENST00000434425 TRIM66O15016 1216 aa7.28□□□□□ -1.24
RFC3-202ENST00000434425 PPP1R15AO75807 674 aaPredicted RBP7.28□□□□□ -1.24
RFC3-202ENST00000434425 PRIM1P49642 420 aaKnown RBP7.28□□□□□ -1.24
RFC3-202ENST00000434425 HDGFP51858 240 aaKnown RBP7.28□□□□□ -1.24
RFC3-202ENST00000434425 MAP3K9P80192 1104 aa7.28□□□□□ -1.24
RFC3-202ENST00000434425 FOXD4L6Q3SYB3 417 aaPredicted RBP7.28□□□□□ -1.24
RFC3-202ENST00000434425 FOXD4L3Q6VB84 417 aaPredicted RBP7.28□□□□□ -1.24
RFC3-202ENST00000434425 APBB1IPQ7Z5R6 666 aaPredicted RBP7.28□□□□□ -1.24
RFC3-202ENST00000434425 NUTM2AQ8IVF1 878 aaPredicted RBP7.28□□□□□ -1.24
RFC3-202ENST00000434425 C19orf44Q9H6X5 657 aa7.28□□□□□ -1.24
RFC3-202ENST00000434425 SPATA31A6Q5VVP1 1343 aa7.28□□□□□ -1.24
RFC3-202ENST00000434425 ANKRD30AQ9BXX3 1397 aa7.28□□□□□ -1.24
RFC3-202ENST00000434425 PLEKHG1Q9ULL1 1385 aa7.28□□□□□ -1.24
RFC3-202ENST00000434425 ZFYVE9O95405 1425 aa7.28□□□□□ -1.24
RFC3-202ENST00000434425 ADGRB3O60242 1522 aa7.28□□□□□ -1.24
RFC3-202ENST00000434425 EP400Q96L91 3159 aa7.27□□□□□ -1.25
RFC3-202ENST00000434425 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.27□□□□□ -1.25
RFC3-202ENST00000434425 RIMS2Q9UQ26 1411 aa7.27□□□□□ -1.25
RFC3-202ENST00000434425 ATF3P18847 181 aa7.27□□□□□ -1.25
RFC3-202ENST00000434425 MYBPC2Q14324 1141 aa7.27□□□□□ -1.25
RFC3-202ENST00000434425 TSHZ1Q6ZSZ6 1077 aa7.27□□□□□ -1.25
RFC3-202ENST00000434425 FAM9BQ8IZU0 186 aa7.27□□□□□ -1.25
RFC3-202ENST00000434425 FNBP4Q8N3X1 1017 aaPredicted RBP7.27□□□□□ -1.25
RFC3-202ENST00000434425 KIAA1522Q9P206 1035 aaPredicted RBP7.27□□□□□ -1.25
RFC3-202ENST00000434425 CLGNO14967 610 aa7.26□□□□□ -1.25
RFC3-202ENST00000434425 OSBPP22059 807 aa7.26□□□□□ -1.25
RFC3-202ENST00000434425 BRINP3Q76B58 766 aa7.26□□□□□ -1.25
RFC3-202ENST00000434425 OXER1Q8TDS5 423 aa7.26□□□□□ -1.25
RFC3-202ENST00000434425 GCC2Q8IWJ2 1684 aa7.26□□□□□ -1.25
RFC3-202ENST00000434425 TMEM131LA2VDJ0 1609 aa7.26□□□□□ -1.25
RFC3-202ENST00000434425 FGD6Q6ZV73 1430 aa7.25□□□□□ -1.25
RFC3-202ENST00000434425 ADAMTS13Q76LX8 1427 aa7.25□□□□□ -1.25
RFC3-202ENST00000434425 NCOA3Q9Y6Q9 1424 aa7.25□□□□□ -1.25
RFC3-202ENST00000434425 G3V3G9 751 aa7.25□□□□□ -1.25
RFC3-202ENST00000434425 TCF3P15923 654 aa7.25□□□□□ -1.25
RFC3-202ENST00000434425 FECHP22830 423 aa7.25□□□□□ -1.25
RFC3-202ENST00000434425 MMP14P50281 582 aa7.25□□□□□ -1.25
RFC3-202ENST00000434425 PDE4DQ08499 809 aa7.25□□□□□ -1.25
RFC3-202ENST00000434425 RTL5Q5HYW3 569 aaPredicted RBP7.25□□□□□ -1.25
RFC3-202ENST00000434425 DDX12PQ92771 950 aa7.25□□□□□ -1.25
RFC3-202ENST00000434425 AFF2P51816 1311 aa7.24□□□□□ -1.25
RFC3-202ENST00000434425 SHPRHQ149N8 1683 aa7.24□□□□□ -1.25
RFC3-202ENST00000434425 HMGB1P1B2RPK0 211 aaPredicted RBP7.24□□□□□ -1.25
RFC3-202ENST00000434425 PPFIA4O75335 1185 aa7.24□□□□□ -1.25
RFC3-202ENST00000434425 TSR1Q2NL82 804 aaKnown RBP7.24□□□□□ -1.25
RFC3-202ENST00000434425 SND1Q7KZF4 910 aaKnown RBP eCLIP7.24□□□□□ -1.25
RFC3-202ENST00000434425 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.24□□□□□ -1.25
RFC3-202ENST00000434425 MORC4Q8TE76 937 aa7.24□□□□□ -1.25
RFC3-202ENST00000434425 DDX17Q92841 729 aaKnown RBP7.24□□□□□ -1.25
RFC3-202ENST00000434425 ZNF622Q969S3 477 aaKnown RBP eCLIP7.24□□□□□ -1.253e-7■□□□□ 10.2
RFC3-202ENST00000434425 L3MBTL3Q96JM7 780 aaPredicted RBP7.24□□□□□ -1.25
RFC3-202ENST00000434425 CHMP4BQ9H444 224 aaKnown RBP7.24□□□□□ -1.25
RFC3-202ENST00000434425 RPS6KL1Q9Y6S9 549 aa7.24□□□□□ -1.25
RFC3-202ENST00000434425 PTPRUQ92729 1446 aa7.24□□□□□ -1.25
RFC3-202ENST00000434425 AHDC1Q5TGY3 1603 aaPredicted RBP7.24□□□□□ -1.25
RFC3-202ENST00000434425 NUTM2FA1L443 756 aa7.24□□□□□ -1.25
RFC3-202ENST00000434425 SDR16C5Q8N3Y7 309 aa7.24□□□□□ -1.25
RFC3-202ENST00000434425 MTA3Q9BTC8 594 aa7.24□□□□□ -1.25
RFC3-202ENST00000434425 QTRT2Q9H974 415 aaKnown RBP7.24□□□□□ -1.25
RFC3-202ENST00000434425 RPRD2Q5VT52 1461 aaKnown RBP7.23□□□□□ -1.25
RFC3-202ENST00000434425 ANKRD50Q9ULJ7 1429 aa7.23□□□□□ -1.25
RFC3-202ENST00000434425 DIP2AQ14689 1571 aa7.23□□□□□ -1.25
RFC3-202ENST00000434425 RAB11FIP3O75154 756 aa7.23□□□□□ -1.25
RFC3-202ENST00000434425 SEC24BO95487 1268 aa7.23□□□□□ -1.25
RFC3-202ENST00000434425 RINLQ6ZS11 566 aa7.23□□□□□ -1.25
RFC3-202ENST00000434425 SMC5Q8IY18 1101 aa7.23□□□□□ -1.25
RFC3-202ENST00000434425 EVI5LQ96CN4 794 aa7.23□□□□□ -1.25
RFC3-202ENST00000434425 ADGRL2O95490 1459 aa7.22□□□□□ -1.25
RFC3-202ENST00000434425 LONRF3Q496Y0 759 aa7.22□□□□□ -1.25
RFC3-202ENST00000434425 CCDC181Q5TID7 509 aa7.22□□□□□ -1.25
RFC3-202ENST00000434425 UBXN4Q92575 508 aa7.22□□□□□ -1.25
RFC3-202ENST00000434425 LRRC59Q96AG4 307 aaKnown RBP7.22□□□□□ -1.25
RFC3-202ENST00000434425 PIK3R4Q99570 1358 aa7.21□□□□□ -1.25
RFC3-202ENST00000434425 PLEKHG3A1L390 1219 aa7.21□□□□□ -1.26
RFC3-202ENST00000434425 RBM6P78332 1123 aaKnown RBP7.21□□□□□ -1.26
RFC3-202ENST00000434425 ZNF662Q6ZS27 426 aa7.21□□□□□ -1.26
RFC3-202ENST00000434425 MAGEC2Q9UBF1 373 aaPredicted RBP7.21□□□□□ -1.26
RFC3-202ENST00000434425 E9PCH4 1651 aa7.2□□□□□ -1.26
RFC3-202ENST00000434425 CDK12Q9NYV4 1490 aaPredicted RBP7.2□□□□□ -1.26
RFC3-202ENST00000434425 EXOC5O00471 708 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms