RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 SPON1Q9HCB6 807 aa27.72■■■□□ 2.03
APOE-203ENST00000434152 FLT4P35916 1363 aa27.72■■■□□ 2.03
APOE-203ENST00000434152 ZCRB1Q8TBF4 217 aaKnown RBP27.7■■■□□ 2.02
APOE-203ENST00000434152 PDGFDQ9GZP0 370 aaPredicted RBP27.7■■■□□ 2.02
APOE-203ENST00000434152 INSRP06213 1382 aa27.7■■■□□ 2.02
APOE-203ENST00000434152 USHBP1Q8N6Y0 703 aa27.69■■■□□ 2.02
APOE-203ENST00000434152 STK32BQ9NY57 414 aa27.68■■■□□ 2.02
APOE-203ENST00000434152 SLC15A2Q16348 729 aa27.67■■■□□ 2.02
APOE-203ENST00000434152 MORC1Q86VD1 984 aa27.67■■■□□ 2.02
APOE-203ENST00000434152 NHSQ6T4R5 1651 aa27.66■■■□□ 2.02
APOE-203ENST00000434152 POLKQ9UBT6 870 aa27.66■■■□□ 2.02
APOE-203ENST00000434152 EMILIN1Q9Y6C2 1016 aa27.66■■■□□ 2.02
APOE-203ENST00000434152 SMG6Q86US8 1419 aaKnown RBP27.66■■■□□ 2.02
APOE-203ENST00000434152 MEGF6O75095 1541 aa27.65■■■□□ 2.02
APOE-203ENST00000434152 PRIM1P49642 420 aaKnown RBP27.64■■■□□ 2.02
APOE-203ENST00000434152 RAPGEF4Q8WZA2 1011 aa27.63■■■□□ 2.01
APOE-203ENST00000434152 SYTL4Q96C24 671 aaPredicted RBP27.62■■■□□ 2.01
APOE-203ENST00000434152 PPP1R1BQ9UD71 204 aaPredicted RBP27.62■■■□□ 2.01
APOE-203ENST00000434152 RGPD2P0DJD1 1756 aa27.62■■■□□ 2.01
APOE-203ENST00000434152 PPM1GO15355 546 aaPredicted RBP27.61■■■□□ 2.01
APOE-203ENST00000434152 ZBTB7AO95365 584 aa27.61■■■□□ 2.01
APOE-203ENST00000434152 LRRC4BQ9NT99 713 aa27.61■■■□□ 2.01
APOE-203ENST00000434152 KAT6BQ8WYB5 2073 aa27.6■■■□□ 2.01
APOE-203ENST00000434152 TATP17735 454 aaPredicted RBP27.6■■■□□ 2.01
APOE-203ENST00000434152 TNNT2P45379 298 aaPredicted RBP27.58■■■□□ 2.01
APOE-203ENST00000434152 ATF5Q9Y2D1 282 aaPredicted RBP27.57■■■□□ 2
APOE-203ENST00000434152 BTAF1O14981 1849 aa27.57■■■□□ 2
APOE-203ENST00000434152 SLC27A3Q5K4L6 730 aa27.55■■■□□ 2
APOE-203ENST00000434152 CC2D1BQ5T0F9 858 aaKnown RBP27.55■■■□□ 2
APOE-203ENST00000434152 PTGER2P43116 358 aa27.54■■■□□ 2
APOE-203ENST00000434152 ZNF827Q17R98 1081 aa27.54■■■□□ 2
APOE-203ENST00000434152 CASZ1Q86V15 1759 aa27.54■■■□□ 2
APOE-203ENST00000434152 NCAPD2Q15021 1401 aa27.53■■■□□ 2
APOE-203ENST00000434152 KCNQ4P56696 695 aa27.53■■■□□ 2
APOE-203ENST00000434152 AKT1S1Q96B36 256 aa27.51■■□□□ 1.99
APOE-203ENST00000434152 EYA1Q99502 592 aa27.51■■□□□ 1.99
APOE-203ENST00000434152 CYP27B1O15528 508 aa27.5■■□□□ 1.99
APOE-203ENST00000434152 MTFR1LQ9H019 292 aa27.5■■□□□ 1.99
APOE-203ENST00000434152 SHANK3Q9BYB0 1731 aa27.5■■□□□ 1.99
APOE-203ENST00000434152 PCDH11XQ9BZA7 1347 aa27.49■■□□□ 1.99
APOE-203ENST00000434152 PCDH11YQ9BZA8 1340 aa27.49■■□□□ 1.99
APOE-203ENST00000434152 PAPPAQ13219 1627 aa27.48■■□□□ 1.99
APOE-203ENST00000434152 EIF4A2Q14240 407 aaKnown RBP27.47■■□□□ 1.99
APOE-203ENST00000434152 PLEKHG2Q9H7P9 1386 aa27.47■■□□□ 1.99
APOE-203ENST00000434152 MTHFSP49914 203 aa27.46■■□□□ 1.99
APOE-203ENST00000434152 SGIP1Q9BQI5 828 aa27.46■■□□□ 1.99
APOE-203ENST00000434152 DOT1LQ8TEK3 1739 aa27.44■■□□□ 1.98
APOE-203ENST00000434152 CCNL1Q9UK58 526 aaPredicted RBP27.44■■□□□ 1.98
APOE-203ENST00000434152 MPRIPQ6WCQ1 1025 aa27.43■■□□□ 1.98
APOE-203ENST00000434152 SPG7Q9UQ90 795 aa27.43■■□□□ 1.98
APOE-203ENST00000434152 DDX10Q13206 875 aaKnown RBP27.42■■□□□ 1.98
APOE-203ENST00000434152 TFCP2L1Q9NZI6 479 aa27.42■■□□□ 1.98
APOE-203ENST00000434152 IGSF1Q8N6C5 1336 aa27.41■■□□□ 1.98
APOE-203ENST00000434152 NKX1-1Q15270 411 aaPredicted RBP27.41■■□□□ 1.98
APOE-203ENST00000434152 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.4■■□□□ 1.98
APOE-203ENST00000434152 PNPLA7Q6ZV29 1317 aa27.4■■□□□ 1.98
APOE-203ENST00000434152 FHDC1Q9C0D6 1143 aaPredicted RBP27.39■■□□□ 1.98
APOE-203ENST00000434152 PKD1L3Q7Z443 1732 aa27.38■■□□□ 1.97
APOE-203ENST00000434152 IL13P35225 146 aa27.38■■□□□ 1.97
APOE-203ENST00000434152 SLC16A10Q8TF71 515 aa27.38■■□□□ 1.97
APOE-203ENST00000434152 SYT17Q9BSW7 474 aa27.38■■□□□ 1.97
APOE-203ENST00000434152 DCAF8L1A6NGE4 600 aa27.37■■□□□ 1.97
APOE-203ENST00000434152 CNGB1Q14028 1251 aaPredicted RBP27.37■■□□□ 1.97
APOE-203ENST00000434152 ARXQ96QS3 562 aa27.37■■□□□ 1.97
APOE-203ENST00000434152 ZNF316A6NFI3 1004 aaPredicted RBP27.36■■□□□ 1.97
APOE-203ENST00000434152 PIGBQ92521 554 aa27.36■■□□□ 1.97
APOE-203ENST00000434152 COL3A1P02461 1466 aaPredicted RBP27.35■■□□□ 1.97
APOE-203ENST00000434152 LY75O60449 1722 aa27.35■■□□□ 1.97
APOE-203ENST00000434152 PPP2R1AP30153 589 aa27.34■■□□□ 1.97
APOE-203ENST00000434152 IFNL2Q8IZJ0 200 aa27.34■■□□□ 1.97
APOE-203ENST00000434152 KDRP35968 1356 aa27.34■■□□□ 1.97
APOE-203ENST00000434152 PALLDQ8WX93 1383 aa27.34■■□□□ 1.97
APOE-203ENST00000434152 DIAPH1O60610 1272 aaKnown RBP27.33■■□□□ 1.97
APOE-203ENST00000434152 PHKG2P15735 406 aa27.33■■□□□ 1.97
APOE-203ENST00000434152 RALBP1Q15311 655 aa27.32■■□□□ 1.96
APOE-203ENST00000434152 SMARCC1Q92922 1105 aaPredicted RBP27.32■■□□□ 1.96
APOE-203ENST00000434152 COL23A1Q86Y22 540 aaPredicted RBP27.31■■□□□ 1.96
APOE-203ENST00000434152 CFAP53Q96M91 514 aa27.31■■□□□ 1.96
APOE-203ENST00000434152 MSH5O43196 834 aa27.28■■□□□ 1.96
APOE-203ENST00000434152 YY1P25490 414 aa27.28■■□□□ 1.96
APOE-203ENST00000434152 HMGB2P26583 209 aaKnown RBP27.28■■□□□ 1.96
APOE-203ENST00000434152 POLD1P28340 1107 aa27.28■■□□□ 1.96
APOE-203ENST00000434152 TMOD3Q9NYL9 352 aa27.27■■□□□ 1.96
APOE-203ENST00000434152 TOGARAM1Q9Y4F4 1720 aa27.26■■□□□ 1.95
APOE-203ENST00000434152 PLEKHO1Q53GL0 409 aaPredicted RBP27.25■■□□□ 1.95
APOE-203ENST00000434152 SULT6B1Q6IMI4 303 aa27.25■■□□□ 1.95
APOE-203ENST00000434152 ASAP1Q9ULH1 1129 aa27.25■■□□□ 1.95
APOE-203ENST00000434152 QSER1Q2KHR3 1735 aa27.24■■□□□ 1.95
APOE-203ENST00000434152 AMOTQ4VCS5 1084 aa27.24■■□□□ 1.95
APOE-203ENST00000434152 AEBP1Q8IUX7 1158 aa27.24■■□□□ 1.95
APOE-203ENST00000434152 LOC102724428A0A0B4J2F2 783 aa27.23■■□□□ 1.95
APOE-203ENST00000434152 SIK1P57059 783 aa27.23■■□□□ 1.95
APOE-203ENST00000434152 MAP3K5Q99683 1374 aa27.22■■□□□ 1.95
APOE-203ENST00000434152 ATG3Q9NT62 314 aa27.22■■□□□ 1.95
APOE-203ENST00000434152 ITGB4P16144 1822 aa27.22■■□□□ 1.95
APOE-203ENST00000434152 KLHL34Q8N239 644 aa27.21■■□□□ 1.95
APOE-203ENST00000434152 FLAD1Q8NFF5 587 aa27.21■■□□□ 1.95
APOE-203ENST00000434152 NUDCQ9Y266 331 aa27.21■■□□□ 1.95
APOE-203ENST00000434152 TUBGCP6Q96RT7 1819 aa27.2■■□□□ 1.95
APOE-203ENST00000434152 ERVV-2B6SEH9 535 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms