RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 TCP11L2Q8N4U5 519 aa7.92□□□□□ -1.14
HMGB3P24-201ENST00000433260 ANKRD24Q8TF21 1146 aa7.92□□□□□ -1.14
HMGB3P24-201ENST00000433260 NLRP2Q9NX02 1062 aa7.92□□□□□ -1.14
HMGB3P24-201ENST00000433260 KNSTRNQ9Y448 316 aa7.92□□□□□ -1.14
HMGB3P24-201ENST00000433260 MAP2P11137 1827 aaKnown RBP7.92□□□□□ -1.14
HMGB3P24-201ENST00000433260 PDE3BQ13370 1112 aa7.91□□□□□ -1.14
HMGB3P24-201ENST00000433260 IP6K1Q92551 441 aa7.91□□□□□ -1.14
HMGB3P24-201ENST00000433260 MAP3K19Q56UN5 1328 aa7.91□□□□□ -1.14
HMGB3P24-201ENST00000433260 COL5A2P05997 1499 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P24-201ENST00000433260 NFAT5O94916 1531 aa7.91□□□□□ -1.14
HMGB3P24-201ENST00000433260 USP54Q70EL1 1684 aa7.9□□□□□ -1.14
HMGB3P24-201ENST00000433260 OVOS2A0A0J9YW53 1432 aa7.9□□□□□ -1.14
HMGB3P24-201ENST00000433260 CRB1P82279 1406 aa7.9□□□□□ -1.14
HMGB3P24-201ENST00000433260 OVOS2Q6IE36 1432 aa7.9□□□□□ -1.14
HMGB3P24-201ENST00000433260 CGNL1Q0VF96 1302 aa7.9□□□□□ -1.14
HMGB3P24-201ENST00000433260 WASHC2AQ641Q2 1341 aa7.9□□□□□ -1.14
HMGB3P24-201ENST00000433260 WDR17Q8IZU2 1322 aa7.9□□□□□ -1.14
HMGB3P24-201ENST00000433260 HOXC9P31274 260 aa7.9□□□□□ -1.14
HMGB3P24-201ENST00000433260 HSP90AB2PQ58FF8 381 aa7.9□□□□□ -1.14
HMGB3P24-201ENST00000433260 MORC1Q86VD1 984 aa7.9□□□□□ -1.14
HMGB3P24-201ENST00000433260 EMILIN1Q9Y6C2 1016 aa7.9□□□□□ -1.14
HMGB3P24-201ENST00000433260 RGPD2P0DJD1 1756 aa7.89□□□□□ -1.15
HMGB3P24-201ENST00000433260 CCDC7Q96M83 1385 aa7.89□□□□□ -1.15
HMGB3P24-201ENST00000433260 CC2D1BQ5T0F9 858 aaKnown RBP7.89□□□□□ -1.15
HMGB3P24-201ENST00000433260 BARGINQ6ZT62 677 aa7.89□□□□□ -1.15
HMGB3P24-201ENST00000433260 RNF25Q96BH1 459 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P24-201ENST00000433260 THRAP3Q9Y2W1 955 aaKnown RBP7.89□□□□□ -1.15
HMGB3P24-201ENST00000433260 EXOC5O00471 708 aa7.88□□□□□ -1.15
HMGB3P24-201ENST00000433260 PLCB2Q00722 1185 aa7.88□□□□□ -1.15
HMGB3P24-201ENST00000433260 DDB1Q16531 1140 aa7.88□□□□□ -1.15
HMGB3P24-201ENST00000433260 USHBP1Q8N6Y0 703 aa7.88□□□□□ -1.15
HMGB3P24-201ENST00000433260 CARD10Q9BWT7 1032 aa7.88□□□□□ -1.15
HMGB3P24-201ENST00000433260 ERBB3P21860 1342 aa7.87□□□□□ -1.15
HMGB3P24-201ENST00000433260 PER1O15534 1290 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P24-201ENST00000433260 SF3B2Q13435 895 aaKnown RBP7.87□□□□□ -1.15
HMGB3P24-201ENST00000433260 NBPF6Q5VWK0 638 aa7.87□□□□□ -1.15
HMGB3P24-201ENST00000433260 HS6ST3Q8IZP7 471 aa7.87□□□□□ -1.15
HMGB3P24-201ENST00000433260 NBPF4Q96M43 638 aa7.87□□□□□ -1.15
HMGB3P24-201ENST00000433260 SGIP1Q9BQI5 828 aa7.87□□□□□ -1.15
HMGB3P24-201ENST00000433260 POLKQ9UBT6 870 aa7.87□□□□□ -1.15
HMGB3P24-201ENST00000433260 STK25O00506 426 aa7.86□□□□□ -1.15
HMGB3P24-201ENST00000433260 TRIM37O94972 964 aa7.86□□□□□ -1.15
HMGB3P24-201ENST00000433260 IL2RBP14784 551 aa7.86□□□□□ -1.15
HMGB3P24-201ENST00000433260 ZEB1P37275 1124 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P24-201ENST00000433260 FAM196AQ6ZSG2 479 aa7.86□□□□□ -1.15
HMGB3P24-201ENST00000433260 DEFB132Q7Z7B7 95 aa7.86□□□□□ -1.15
HMGB3P24-201ENST00000433260 MARCH10Q8NA82 808 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P24-201ENST00000433260 ZNF579Q8NAF0 562 aaKnown RBP7.86□□□□□ -1.15
HMGB3P24-201ENST00000433260 DDX54Q8TDD1 881 aaKnown RBP7.86□□□□□ -1.15
HMGB3P24-201ENST00000433260 PEAK1Q9H792 1746 aa7.86□□□□□ -1.15
HMGB3P24-201ENST00000433260 ANKRD26Q9UPS8 1709 aa7.86□□□□□ -1.15
HMGB3P24-201ENST00000433260 THSD7AQ9UPZ6 1657 aa7.86□□□□□ -1.15
HMGB3P24-201ENST00000433260 C19orf67A6NJJ6 358 aa7.85□□□□□ -1.15
HMGB3P24-201ENST00000433260 CCDC125Q86Z20 511 aa7.85□□□□□ -1.15
HMGB3P24-201ENST00000433260 CDCA7Q9BWT1 371 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P24-201ENST00000433260 PCDHB13Q9Y5F0 798 aa7.85□□□□□ -1.15
HMGB3P24-201ENST00000433260 BLMP54132 1417 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P24-201ENST00000433260 KAT6BQ8WYB5 2073 aa7.84□□□□□ -1.15
HMGB3P24-201ENST00000433260 APBA3O96018 575 aa7.84□□□□□ -1.15
HMGB3P24-201ENST00000433260 EN1Q05925 392 aaPredicted RBP7.84□□□□□ -1.15
HMGB3P24-201ENST00000433260 DDX10Q13206 875 aaKnown RBP7.84□□□□□ -1.15
HMGB3P24-201ENST00000433260 PDAP1Q13442 181 aaKnown RBP7.84□□□□□ -1.15
HMGB3P24-201ENST00000433260 ACSBG1Q96GR2 724 aa7.84□□□□□ -1.15
HMGB3P24-201ENST00000433260 WNK3Q9BYP7 1800 aa7.84□□□□□ -1.15
HMGB3P24-201ENST00000433260 INSRP06213 1382 aa7.84□□□□□ -1.16
HMGB3P24-201ENST00000433260 FLT4P35916 1363 aa7.84□□□□□ -1.16
HMGB3P24-201ENST00000433260 PARP4Q9UKK3 1724 aaKnown RBP7.83□□□□□ -1.16
HMGB3P24-201ENST00000433260 HAX1O00165 279 aa7.83□□□□□ -1.16
HMGB3P24-201ENST00000433260 TATP17735 454 aaPredicted RBP7.83□□□□□ -1.16
HMGB3P24-201ENST00000433260 MTHFSP49914 203 aa7.83□□□□□ -1.16
HMGB3P24-201ENST00000433260 PTF1AQ7RTS3 328 aa7.83□□□□□ -1.16
HMGB3P24-201ENST00000433260 KIF12Q96FN5 646 aa7.83□□□□□ -1.16
HMGB3P24-201ENST00000433260 STK24Q9Y6E0 443 aa7.83□□□□□ -1.16
HMGB3P24-201ENST00000433260 SMG6Q86US8 1419 aaKnown RBP7.83□□□□□ -1.16
HMGB3P24-201ENST00000433260 ABCC6O95255 1503 aa7.83□□□□□ -1.16
HMGB3P24-201ENST00000433260 LRRC37A3O60309 1634 aa7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 MAP3K13O43283 966 aa7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 EIF4A2Q14240 407 aaKnown RBP7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 EZH2Q15910 746 aaKnown RBP7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 PAXIP1Q6ZW49 1069 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 SPRYD3Q8NCJ5 442 aa7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 ZCRB1Q8TBF4 217 aaKnown RBP7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 RAPGEF4Q8WZA2 1011 aa7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 ZFP91Q96JP5 570 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 CFAP44Q96MT7 982 aa7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 EYA1Q99502 592 aa7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 PCDHB8Q9UN66 801 aa7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 RTL1A6NKG5 1358 aa7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 NSD2O96028 1365 aa7.82□□□□□ -1.16
HMGB3P24-201ENST00000433260 SBF2Q86WG5 1849 aa7.81□□□□□ -1.16
HMGB3P24-201ENST00000433260 KCNQ2O43526 872 aa7.81□□□□□ -1.16
HMGB3P24-201ENST00000433260 BAG6P46379 1132 aa7.81□□□□□ -1.16
HMGB3P24-201ENST00000433260 BCL11BQ9C0K0 894 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P24-201ENST00000433260 FAM208AQ9UK61 1670 aaKnown RBP7.81□□□□□ -1.16
HMGB3P24-201ENST00000433260 RGPD1P0DJD0 1748 aa7.81□□□□□ -1.16
HMGB3P24-201ENST00000433260 DISP2A7MBM2 1401 aa7.8□□□□□ -1.16
HMGB3P24-201ENST00000433260 SYTL4Q96C24 671 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P24-201ENST00000433260 PHF12Q96QT6 1004 aa7.8□□□□□ -1.16
HMGB3P24-201ENST00000433260 KIF24Q5T7B8 1368 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 913.5 ms