RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 NBPF4Q96M43 638 aa31.64■■■□□ 2.66
HOMER3-203ENST00000433218 ITGB4P16144 1822 aa31.63■■■□□ 2.65
HOMER3-203ENST00000433218 SPON1Q9HCB6 807 aa31.63■■■□□ 2.65
HOMER3-203ENST00000433218 ZBTB7AO95365 584 aa31.62■■■□□ 2.65
HOMER3-203ENST00000433218 HSP90AB2PQ58FF8 381 aa31.61■■■□□ 2.65
HOMER3-203ENST00000433218 LRRC4BQ9NT99 713 aa31.6■■■□□ 2.65
HOMER3-203ENST00000433218 FLT4P35916 1363 aa31.59■■■□□ 2.65
HOMER3-203ENST00000433218 SLC15A2Q16348 729 aa31.59■■■□□ 2.65
HOMER3-203ENST00000433218 EMILIN1Q9Y6C2 1016 aa31.59■■■□□ 2.65
HOMER3-203ENST00000433218 ZNF827Q17R98 1081 aa31.58■■■□□ 2.65
HOMER3-203ENST00000433218 CDCA8Q53HL2 280 aa31.58■■■□□ 2.65
HOMER3-203ENST00000433218 TIMELESSQ9UNS1 1208 aa31.58■■■□□ 2.65
HOMER3-203ENST00000433218 SMG6Q86US8 1419 aaKnown RBP31.58■■■□□ 2.65
HOMER3-203ENST00000433218 INSRP06213 1382 aa31.58■■■□□ 2.65
HOMER3-203ENST00000433218 STK32BQ9NY57 414 aa31.58■■■□□ 2.65
HOMER3-203ENST00000433218 GOLGB1Q14789 3259 aaKnown RBP31.57■■■□□ 2.64
HOMER3-203ENST00000433218 TAF1LQ8IZX4 1826 aa31.56■■■□□ 2.64
HOMER3-203ENST00000433218 COL24A1Q17RW2 1714 aa31.55■■■□□ 2.64
HOMER3-203ENST00000433218 KCNQ4P56696 695 aa31.55■■■□□ 2.64
HOMER3-203ENST00000433218 C5P01031 1676 aa31.54■■■□□ 2.64
HOMER3-203ENST00000433218 PTGER2P43116 358 aa31.54■■■□□ 2.64
HOMER3-203ENST00000433218 PPP1R1BQ9UD71 204 aaPredicted RBP31.54■■■□□ 2.64
HOMER3-203ENST00000433218 POLR3GLQ9BT43 218 aa31.53■■■□□ 2.64
HOMER3-203ENST00000433218 ATF5Q9Y2D1 282 aaPredicted RBP31.53■■■□□ 2.64
HOMER3-203ENST00000433218 ZCRB1Q8TBF4 217 aaKnown RBP31.52■■■□□ 2.64
HOMER3-203ENST00000433218 SYTL4Q96C24 671 aaPredicted RBP31.52■■■□□ 2.64
HOMER3-203ENST00000433218 NCAPD2Q15021 1401 aa31.51■■■□□ 2.63
HOMER3-203ENST00000433218 PRIM1P49642 420 aaKnown RBP31.5■■■□□ 2.63
HOMER3-203ENST00000433218 HSPA5P11021 654 aaKnown RBP31.49■■■□□ 2.63
HOMER3-203ENST00000433218 KIF24Q5T7B8 1368 aa31.49■■■□□ 2.63
HOMER3-203ENST00000433218 SGIP1Q9BQI5 828 aa31.45■■■□□ 2.63
HOMER3-203ENST00000433218 PPM1GO15355 546 aaPredicted RBP31.43■■■□□ 2.62
HOMER3-203ENST00000433218 RAPGEF4Q8WZA2 1011 aa31.43■■■□□ 2.62
HOMER3-203ENST00000433218 AKT1S1Q96B36 256 aa31.43■■■□□ 2.62
HOMER3-203ENST00000433218 CGNL1Q0VF96 1302 aa31.43■■■□□ 2.62
HOMER3-203ENST00000433218 TATP17735 454 aaPredicted RBP31.41■■■□□ 2.62
HOMER3-203ENST00000433218 MTFR1LQ9H019 292 aa31.4■■■□□ 2.62
HOMER3-203ENST00000433218 PNPLA7Q6ZV29 1317 aa31.39■■■□□ 2.62
HOMER3-203ENST00000433218 PCDH11XQ9BZA7 1347 aa31.39■■■□□ 2.62
HOMER3-203ENST00000433218 PCDH11YQ9BZA8 1340 aa31.39■■■□□ 2.62
HOMER3-203ENST00000433218 CYP27B1O15528 508 aa31.39■■■□□ 2.62
HOMER3-203ENST00000433218 EIF4G2P78344 907 aaKnown RBP eCLIP31.39■■■□□ 2.62
HOMER3-203ENST00000433218 TNNT2P45379 298 aaPredicted RBP31.38■■■□□ 2.61
HOMER3-203ENST00000433218 POLKQ9UBT6 870 aa31.37■■■□□ 2.61
HOMER3-203ENST00000433218 SLC27A3Q5K4L6 730 aa31.36■■■□□ 2.61
HOMER3-203ENST00000433218 FHDC1Q9C0D6 1143 aaPredicted RBP31.36■■■□□ 2.61
HOMER3-203ENST00000433218 UBR3Q6ZT12 1888 aa31.36■■■□□ 2.61
HOMER3-203ENST00000433218 WASHC2AQ641Q2 1341 aa31.35■■■□□ 2.61
HOMER3-203ENST00000433218 C4BP0C0L5 1744 aa31.35■■■□□ 2.61
HOMER3-203ENST00000433218 EYA1Q99502 592 aa31.33■■■□□ 2.61
HOMER3-203ENST00000433218 CHD4Q14839 1912 aa31.33■■■□□ 2.61
HOMER3-203ENST00000433218 PANK3Q9H999 370 aa31.32■■■□□ 2.61
HOMER3-203ENST00000433218 CCNL1Q9UK58 526 aaPredicted RBP31.32■■■□□ 2.6
HOMER3-203ENST00000433218 EIF4A2Q14240 407 aaKnown RBP31.29■■■□□ 2.6
HOMER3-203ENST00000433218 PALLDQ8WX93 1383 aa31.29■■■□□ 2.6
HOMER3-203ENST00000433218 SYT17Q9BSW7 474 aa31.28■■■□□ 2.6
HOMER3-203ENST00000433218 VIRMAQ69YN4 1812 aaKnown RBP31.28■■■□□ 2.6
HOMER3-203ENST00000433218 MPRIPQ6WCQ1 1025 aa31.26■■■□□ 2.6
HOMER3-203ENST00000433218 TFCP2L1Q9NZI6 479 aa31.26■■■□□ 2.6
HOMER3-203ENST00000433218 ARXQ96QS3 562 aa31.25■■■□□ 2.59
HOMER3-203ENST00000433218 YY1P25490 414 aa31.24■■■□□ 2.59
HOMER3-203ENST00000433218 AMIGO3Q86WK7 504 aa31.22■■■□□ 2.59
HOMER3-203ENST00000433218 MAP3K5Q99683 1374 aa31.2■■■□□ 2.59
HOMER3-203ENST00000433218 IGSF1Q8N6C5 1336 aa31.19■■■□□ 2.58
HOMER3-203ENST00000433218 COL23A1Q86Y22 540 aaPredicted RBP31.19■■■□□ 2.58
HOMER3-203ENST00000433218 PIGBQ92521 554 aa31.19■■■□□ 2.58
HOMER3-203ENST00000433218 COL5A3P25940 1745 aaPredicted RBP31.19■■■□□ 2.58
HOMER3-203ENST00000433218 SMIM5Q71RC9 77 aa31.18■■■□□ 2.58
HOMER3-203ENST00000433218 KIF7Q2M1P5 1343 aa31.18■■■□□ 2.58
HOMER3-203ENST00000433218 NKX1-1Q15270 411 aaPredicted RBP31.17■■■□□ 2.58
HOMER3-203ENST00000433218 MSL1Q68DK7 614 aa31.16■■■□□ 2.58
HOMER3-203ENST00000433218 KLHL34Q8N239 644 aa31.16■■■□□ 2.58
HOMER3-203ENST00000433218 PHKG2P15735 406 aa31.15■■■□□ 2.58
HOMER3-203ENST00000433218 SPG7Q9UQ90 795 aa31.15■■■□□ 2.58
HOMER3-203ENST00000433218 SLC16A10Q8TF71 515 aa31.15■■■□□ 2.58
HOMER3-203ENST00000433218 SCN11AQ9UI33 1791 aa31.15■■■□□ 2.58
HOMER3-203ENST00000433218 AEBP1Q8IUX7 1158 aa31.14■■■□□ 2.58
HOMER3-203ENST00000433218 KDM6AO15550 1401 aaPredicted RBP31.13■■■□□ 2.57
HOMER3-203ENST00000433218 MSH5O43196 834 aa31.12■■■□□ 2.57
HOMER3-203ENST00000433218 NLGN2Q8NFZ4 835 aa31.12■■■□□ 2.57
HOMER3-203ENST00000433218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.1■■■□□ 2.57
HOMER3-203ENST00000433218 ASAP1Q9ULH1 1129 aa31.1■■■□□ 2.57
HOMER3-203ENST00000433218 MYH14Q7Z406 1995 aaKnown RBP31.1■■■□□ 2.57
HOMER3-203ENST00000433218 ZNF831Q5JPB2 1677 aa31.1■■■□□ 2.57
HOMER3-203ENST00000433218 MORC1Q86VD1 984 aa31.09■■■□□ 2.57
HOMER3-203ENST00000433218 C4AP0C0L4 1744 aa31.09■■■□□ 2.57
HOMER3-203ENST00000433218 DCAF8L1A6NGE4 600 aa31.08■■■□□ 2.57
HOMER3-203ENST00000433218 POLD1P28340 1107 aa31.08■■■□□ 2.57
HOMER3-203ENST00000433218 AMER1Q5JTC6 1135 aaPredicted RBP31.08■■■□□ 2.57
HOMER3-203ENST00000433218 IFNL2Q8IZJ0 200 aa31.08■■■□□ 2.57
HOMER3-203ENST00000433218 LINC00116Q8NCU8 138 aa31.08■■■□□ 2.57
HOMER3-203ENST00000433218 KDRP35968 1356 aa31.07■■■□□ 2.56
HOMER3-203ENST00000433218 TMOD3Q9NYL9 352 aa31.07■■■□□ 2.56
HOMER3-203ENST00000433218 TJP1Q07157 1748 aa31.06■■■□□ 2.56
HOMER3-203ENST00000433218 ITPK1Q13572 414 aa31.06■■■□□ 2.56
HOMER3-203ENST00000433218 SMARCC1Q92922 1105 aaPredicted RBP31.05■■■□□ 2.56
HOMER3-203ENST00000433218 PLEKHG2Q9H7P9 1386 aa31.05■■■□□ 2.56
HOMER3-203ENST00000433218 LOC102724428A0A0B4J2F2 783 aa31.04■■■□□ 2.56
HOMER3-203ENST00000433218 PHF14O94880 888 aa31.04■■■□□ 2.56
HOMER3-203ENST00000433218 SIK1P57059 783 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms