RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 DDB1Q16531 1140 aa19.32■□□□□ 0.68
CSTF3-202ENST00000431742 KRT27Q7Z3Y8 459 aa19.32■□□□□ 0.68
CSTF3-202ENST00000431742 RAPGEF4Q8WZA2 1011 aa19.32■□□□□ 0.68
CSTF3-202ENST00000431742 TATP17735 454 aaPredicted RBP19.3■□□□□ 0.68
CSTF3-202ENST00000431742 SULT6B1Q6IMI4 303 aa19.3■□□□□ 0.68
CSTF3-202ENST00000431742 DOT1LQ8TEK3 1739 aa19.3■□□□□ 0.68
CSTF3-202ENST00000431742 TNS1Q9HBL0 1735 aaKnown RBP19.3■□□□□ 0.68
CSTF3-202ENST00000431742 TOGARAM1Q9Y4F4 1720 aa19.29■□□□□ 0.68
CSTF3-202ENST00000431742 BCL9O00512 1426 aa19.29■□□□□ 0.68
CSTF3-202ENST00000431742 EXOC5O00471 708 aa19.29■□□□□ 0.68
CSTF3-202ENST00000431742 POTEDQ86YR6 584 aa19.29■□□□□ 0.68
CSTF3-202ENST00000431742 NUDCQ9Y266 331 aa19.29■□□□□ 0.68
CSTF3-202ENST00000431742 NHSQ6T4R5 1651 aa19.29■□□□□ 0.68
CSTF3-202ENST00000431742 U2SURPO15042 1029 aaKnown RBP19.28■□□□□ 0.68
CSTF3-202ENST00000431742 PDE3BQ13370 1112 aa19.28■□□□□ 0.68
CSTF3-202ENST00000431742 HMOX1P09601 288 aa19.27■□□□□ 0.68
CSTF3-202ENST00000431742 MARCH10Q8NA82 808 aaPredicted RBP19.27■□□□□ 0.68
CSTF3-202ENST00000431742 ZCRB1Q8TBF4 217 aaKnown RBP19.27■□□□□ 0.68
CSTF3-202ENST00000431742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.27■□□□□ 0.682e-12■■□□□ 14.3
CSTF3-202ENST00000431742 ITGB4P16144 1822 aa19.25■□□□□ 0.67
CSTF3-202ENST00000431742 SCN11AQ9UI33 1791 aa19.25■□□□□ 0.67
CSTF3-202ENST00000431742 ADAMTS7Q9UKP4 1686 aa19.25■□□□□ 0.67
CSTF3-202ENST00000431742 RSPH6AQ9H0K4 717 aa19.25■□□□□ 0.67
CSTF3-202ENST00000431742 DLG5Q8TDM6 1919 aa19.25■□□□□ 0.67
CSTF3-202ENST00000431742 PCDH11XQ9BZA7 1347 aa19.25■□□□□ 0.67
CSTF3-202ENST00000431742 PCDH11YQ9BZA8 1340 aa19.25■□□□□ 0.67
CSTF3-202ENST00000431742 U2AF1L5P0DN76 240 aaPredicted RBP19.24■□□□□ 0.67
CSTF3-202ENST00000431742 U2AF1Q01081 240 aaKnown RBP eCLIP19.24■□□□□ 0.678e-37■■■■□ 22.1
CSTF3-202ENST00000431742 FAM182BQ5T319 152 aa19.24■□□□□ 0.67
CSTF3-202ENST00000431742 CCDC184Q52MB2 194 aa19.23■□□□□ 0.67
CSTF3-202ENST00000431742 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
CSTF3-202ENST00000431742 KAT6BQ8WYB5 2073 aa19.23■□□□□ 0.67
CSTF3-202ENST00000431742 CYP27B1O15528 508 aa19.22■□□□□ 0.67
CSTF3-202ENST00000431742 FAM196AQ6ZSG2 479 aa19.22■□□□□ 0.67
CSTF3-202ENST00000431742 SPG7Q9UQ90 795 aa19.22■□□□□ 0.67
CSTF3-202ENST00000431742 BTAF1O14981 1849 aa19.22■□□□□ 0.67
CSTF3-202ENST00000431742 FCHSD2O94868 740 aa19.21■□□□□ 0.67
CSTF3-202ENST00000431742 AMOTQ4VCS5 1084 aa19.21■□□□□ 0.67
CSTF3-202ENST00000431742 RGPD3A6NKT7 1758 aaPredicted RBP19.21■□□□□ 0.67
CSTF3-202ENST00000431742 RGPD4Q7Z3J3 1758 aa19.21■□□□□ 0.67
CSTF3-202ENST00000431742 PRKAR2BP31323 418 aa19.2■□□□□ 0.66
CSTF3-202ENST00000431742 PLEKHO1Q53GL0 409 aaPredicted RBP19.2■□□□□ 0.66
CSTF3-202ENST00000431742 DDX54Q8TDD1 881 aaKnown RBP19.2■□□□□ 0.66
CSTF3-202ENST00000431742 PHKG2P15735 406 aa19.18■□□□□ 0.66
CSTF3-202ENST00000431742 NKX1-1Q15270 411 aaPredicted RBP19.18■□□□□ 0.66
CSTF3-202ENST00000431742 SIPA1L3O60292 1781 aaPredicted RBP19.17■□□□□ 0.66
CSTF3-202ENST00000431742 ZNF530Q6P9A1 599 aaPredicted RBP19.17■□□□□ 0.66
CSTF3-202ENST00000431742 PHACTR3Q96KR7 559 aa19.17■□□□□ 0.66
CSTF3-202ENST00000431742 PLEKHF1Q96S99 279 aa19.17■□□□□ 0.66
CSTF3-202ENST00000431742 MRS2Q9HD23 443 aa19.17■□□□□ 0.66
CSTF3-202ENST00000431742 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
CSTF3-202ENST00000431742 WDR43Q15061 677 aaKnown RBP eCLIP19.16■□□□□ 0.66
CSTF3-202ENST00000431742 MTHFSDQ2M296 383 aaKnown RBP19.16■□□□□ 0.66
CSTF3-202ENST00000431742 IFNL2Q8IZJ0 200 aa19.16■□□□□ 0.66
CSTF3-202ENST00000431742 UPF1Q92900 1129 aaKnown RBP eCLIP19.15■□□□□ 0.66
CSTF3-202ENST00000431742 MRC1P22897 1456 aa19.15■□□□□ 0.66
CSTF3-202ENST00000431742 PNISRQ8TF01 805 aaKnown RBP19.14■□□□□ 0.65
CSTF3-202ENST00000431742 ADAMTS8Q9UP79 889 aa19.14■□□□□ 0.65
CSTF3-202ENST00000431742 SOCS7O14512 581 aa19.13■□□□□ 0.65
CSTF3-202ENST00000431742 GAS2L2Q8NHY3 880 aa19.13■□□□□ 0.65
CSTF3-202ENST00000431742 RREB1Q92766 1687 aa19.13■□□□□ 0.65
CSTF3-202ENST00000431742 LY75O60449 1722 aa19.13■□□□□ 0.65
CSTF3-202ENST00000431742 MAP3K5Q99683 1374 aa19.12■□□□□ 0.65
CSTF3-202ENST00000431742 AKAP4Q5JQC9 854 aa19.12■□□□□ 0.65
CSTF3-202ENST00000431742 PNNQ9H307 717 aaKnown RBP19.12■□□□□ 0.65
CSTF3-202ENST00000431742 PAPPAQ13219 1627 aa19.11■□□□□ 0.65
CSTF3-202ENST00000431742 CCER2I3L3R5 266 aa19.11■□□□□ 0.65
CSTF3-202ENST00000431742 TRIM37O94972 964 aa19.11■□□□□ 0.65
CSTF3-202ENST00000431742 HSP90AB1P08238 724 aaKnown RBP19.11■□□□□ 0.65
CSTF3-202ENST00000431742 C1orf141Q5JVX7 400 aa19.11■□□□□ 0.65
CSTF3-202ENST00000431742 PTF1AQ7RTS3 328 aa19.11■□□□□ 0.65
CSTF3-202ENST00000431742 CCDC125Q86Z20 511 aa19.11■□□□□ 0.65
CSTF3-202ENST00000431742 KCNQ2O43526 872 aa19.1■□□□□ 0.65
CSTF3-202ENST00000431742 ACSBG1Q96GR2 724 aa19.1■□□□□ 0.65
CSTF3-202ENST00000431742 DCAF5Q96JK2 942 aa19.1■□□□□ 0.65
CSTF3-202ENST00000431742 BCL11BQ9C0K0 894 aaPredicted RBP19.1■□□□□ 0.65
CSTF3-202ENST00000431742 MAPK8IP3Q9UPT6 1336 aa19.08■□□□□ 0.65
CSTF3-202ENST00000431742 MIER1Q8N108 512 aa19.08■□□□□ 0.64
CSTF3-202ENST00000431742 RUNDC1Q96C34 613 aa19.08■□□□□ 0.64
CSTF3-202ENST00000431742 NEFMP07197 916 aa19.07■□□□□ 0.64
CSTF3-202ENST00000431742 PRIM1P49642 420 aaKnown RBP19.07■□□□□ 0.64
CSTF3-202ENST00000431742 MPRIPQ6WCQ1 1025 aa19.07■□□□□ 0.64
CSTF3-202ENST00000431742 NUP188Q5SRE5 1749 aa19.07■□□□□ 0.64
CSTF3-202ENST00000431742 CEMIPQ8WUJ3 1361 aa19.06■□□□□ 0.64
CSTF3-202ENST00000431742 UBR2Q8IWV8 1755 aa19.06■□□□□ 0.64
CSTF3-202ENST00000431742 GNAT3A8MTJ3 354 aa19.06■□□□□ 0.64
CSTF3-202ENST00000431742 ERVV-2B6SEH9 535 aa19.06■□□□□ 0.64
CSTF3-202ENST00000431742 NFE2L2Q16236 605 aa19.06■□□□□ 0.64
CSTF3-202ENST00000431742 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
CSTF3-202ENST00000431742 ZNF831Q5JPB2 1677 aa19.05■□□□□ 0.64
CSTF3-202ENST00000431742 RNMTO43148 476 aaKnown RBP19.05■□□□□ 0.64
CSTF3-202ENST00000431742 LGR6Q9HBX8 967 aa19.04■□□□□ 0.64
CSTF3-202ENST00000431742 TAF1LQ8IZX4 1826 aa19.04■□□□□ 0.64
CSTF3-202ENST00000431742 CICQ96RK0 1608 aaPredicted RBP19.03■□□□□ 0.64
CSTF3-202ENST00000431742 HTATSF1O43719 755 aaKnown RBP19.03■□□□□ 0.64
CSTF3-202ENST00000431742 SF3B2Q13435 895 aaKnown RBP19.03■□□□□ 0.64
CSTF3-202ENST00000431742 IL17REQ8NFR9 667 aa19.03■□□□□ 0.64
CSTF3-202ENST00000431742 SYTL4Q96C24 671 aaPredicted RBP19.03■□□□□ 0.64
CSTF3-202ENST00000431742 KDM3BQ7LBC6 1761 aa19.03■□□□□ 0.64
CSTF3-202ENST00000431742 APBA3O96018 575 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms