RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 EN1Q05925 392 aaPredicted RBP23.99■■□□□ 1.43
HMGN1-206ENST00000431390 KIAA0232Q92628 1395 aa23.99■■□□□ 1.43
HMGN1-206ENST00000431390 CCDC27Q2M243 656 aa23.99■■□□□ 1.43
HMGN1-206ENST00000431390 CAMTA1Q9Y6Y1 1673 aa23.98■■□□□ 1.43
HMGN1-206ENST00000431390 FAM208AQ9UK61 1670 aaKnown RBP23.97■■□□□ 1.43
HMGN1-206ENST00000431390 LTV1Q96GA3 475 aaPredicted RBP23.97■■□□□ 1.43
HMGN1-206ENST00000431390 TMPOP42166 694 aaKnown RBP23.96■■□□□ 1.43
HMGN1-206ENST00000431390 AEBP1Q8IUX7 1158 aa23.96■■□□□ 1.43
HMGN1-206ENST00000431390 PRDM11Q9NQV5 511 aa23.96■■□□□ 1.43
HMGN1-206ENST00000431390 AXIN2Q9Y2T1 843 aa23.96■■□□□ 1.43
HMGN1-206ENST00000431390 RGPD2P0DJD1 1756 aa23.96■■□□□ 1.43
HMGN1-206ENST00000431390 LMO7Q8WWI1 1683 aa23.95■■□□□ 1.42
HMGN1-206ENST00000431390 ERBB3P21860 1342 aa23.95■■□□□ 1.42
HMGN1-206ENST00000431390 NCAPD2Q15021 1401 aa23.95■■□□□ 1.42
HMGN1-206ENST00000431390 ANKRD24Q8TF21 1146 aa23.95■■□□□ 1.42
HMGN1-206ENST00000431390 WWC1Q8IX03 1113 aa23.94■■□□□ 1.42
HMGN1-206ENST00000431390 RRP7AQ9Y3A4 280 aaKnown RBP23.94■■□□□ 1.42
HMGN1-206ENST00000431390 DISP2A7MBM2 1401 aa23.93■■□□□ 1.42
HMGN1-206ENST00000431390 NEUROD2Q15784 382 aa23.93■■□□□ 1.42
HMGN1-206ENST00000431390 PHACTR3Q96KR7 559 aa23.93■■□□□ 1.42
HMGN1-206ENST00000431390 GOLGA2Q08379 1002 aa23.92■■□□□ 1.42
HMGN1-206ENST00000431390 NFE2L2Q16236 605 aa23.92■■□□□ 1.42
HMGN1-206ENST00000431390 DLG5Q8TDM6 1919 aa23.91■■□□□ 1.42
HMGN1-206ENST00000431390 R3HDM1Q15032 1099 aaKnown RBP23.91■■□□□ 1.42
HMGN1-206ENST00000431390 SPATA31A1Q5TZJ5 1347 aa23.91■■□□□ 1.42
HMGN1-206ENST00000431390 CHRNA2Q15822 529 aa23.91■■□□□ 1.42
HMGN1-206ENST00000431390 NBPF6Q5VWK0 638 aa23.91■■□□□ 1.42
HMGN1-206ENST00000431390 NBPF4Q96M43 638 aa23.91■■□□□ 1.42
HMGN1-206ENST00000431390 RIPK4P57078 832 aa23.9■■□□□ 1.42
HMGN1-206ENST00000431390 STRN4Q9NRL3 753 aa23.9■■□□□ 1.42
HMGN1-206ENST00000431390 EZH2Q15910 746 aaKnown RBP23.89■■□□□ 1.41
HMGN1-206ENST00000431390 WDR63Q8IWG1 891 aa23.89■■□□□ 1.41
HMGN1-206ENST00000431390 CDCA7LQ96GN5 454 aa23.87■■□□□ 1.41
HMGN1-206ENST00000431390 TRIM35Q9UPQ4 493 aa23.87■■□□□ 1.41
HMGN1-206ENST00000431390 E9PSI1 815 aa23.86■■□□□ 1.41
HMGN1-206ENST00000431390 TRIM37O94972 964 aa23.86■■□□□ 1.41
HMGN1-206ENST00000431390 SLFN5Q08AF3 891 aa23.86■■□□□ 1.41
HMGN1-206ENST00000431390 LMOD3Q0VAK6 560 aa23.86■■□□□ 1.41
HMGN1-206ENST00000431390 RREB1Q92766 1687 aa23.85■■□□□ 1.41
HMGN1-206ENST00000431390 USHBP1Q8N6Y0 703 aa23.85■■□□□ 1.41
HMGN1-206ENST00000431390 COL5A2P05997 1499 aaPredicted RBP23.85■■□□□ 1.41
HMGN1-206ENST00000431390 TRMT2AQ8IZ69 625 aaKnown RBP23.84■■□□□ 1.41
HMGN1-206ENST00000431390 USP35Q9P2H5 1018 aa23.84■■□□□ 1.41
HMGN1-206ENST00000431390 FAM196AQ6ZSG2 479 aa23.83■■□□□ 1.41
HMGN1-206ENST00000431390 GAS2L2Q8NHY3 880 aa23.83■■□□□ 1.41
HMGN1-206ENST00000431390 NUP188Q5SRE5 1749 aa23.83■■□□□ 1.41
HMGN1-206ENST00000431390 CSB-PGBD3P0DP91 1061 aa23.82■■□□□ 1.4
HMGN1-206ENST00000431390 CAMKK2Q96RR4 588 aa23.82■■□□□ 1.4
HMGN1-206ENST00000431390 IL16Q14005 1332 aa23.82■■□□□ 1.4
HMGN1-206ENST00000431390 PLEKHG2Q9H7P9 1386 aa23.82■■□□□ 1.4
HMGN1-206ENST00000431390 DUSP27Q5VZP5 1158 aa23.82■■□□□ 1.4
HMGN1-206ENST00000431390 WDR17Q8IZU2 1322 aa23.81■■□□□ 1.4
HMGN1-206ENST00000431390 NLRP2Q9NX02 1062 aa23.81■■□□□ 1.4
HMGN1-206ENST00000431390 APBA3O96018 575 aa23.8■■□□□ 1.4
HMGN1-206ENST00000431390 MTHFSDQ2M296 383 aaKnown RBP23.8■■□□□ 1.4
HMGN1-206ENST00000431390 CALD1Q05682 793 aaKnown RBP23.79■■□□□ 1.4
HMGN1-206ENST00000431390 SPINK5Q9NQ38 1064 aaPredicted RBP23.79■■□□□ 1.4
HMGN1-206ENST00000431390 EVA1CP58658 441 aa23.78■■□□□ 1.4
HMGN1-206ENST00000431390 AMOTQ4VCS5 1084 aa23.77■■□□□ 1.4
HMGN1-206ENST00000431390 BARGINQ6ZT62 677 aa23.77■■□□□ 1.4
HMGN1-206ENST00000431390 HTATSF1O43719 755 aaKnown RBP23.76■■□□□ 1.39
HMGN1-206ENST00000431390 LARP1Q6PKG0 1096 aaKnown RBP23.76■■□□□ 1.39
HMGN1-206ENST00000431390 MYH16Q9H6N6 1097 aa23.76■■□□□ 1.39
HMGN1-206ENST00000431390 PARP4Q9UKK3 1724 aaKnown RBP23.75■■□□□ 1.39
HMGN1-206ENST00000431390 PLEKHO1Q53GL0 409 aaPredicted RBP23.74■■□□□ 1.39
HMGN1-206ENST00000431390 RAPGEF4Q8WZA2 1011 aa23.74■■□□□ 1.39
HMGN1-206ENST00000431390 TOM1L2Q6ZVM7 507 aa23.74■■□□□ 1.39
HMGN1-206ENST00000431390 MAP3K5Q99683 1374 aa23.73■■□□□ 1.39
HMGN1-206ENST00000431390 CARD10Q9BWT7 1032 aa23.73■■□□□ 1.39
HMGN1-206ENST00000431390 CRB1P82279 1406 aa23.72■■□□□ 1.39
HMGN1-206ENST00000431390 PKD1L3Q7Z443 1732 aa23.72■■□□□ 1.39
HMGN1-206ENST00000431390 GNAT3A8MTJ3 354 aa23.71■■□□□ 1.39
HMGN1-206ENST00000431390 TATP17735 454 aaPredicted RBP23.71■■□□□ 1.39
HMGN1-206ENST00000431390 RTF1Q92541 710 aaKnown RBP23.71■■□□□ 1.39
HMGN1-206ENST00000431390 LRRC37A3O60309 1634 aa23.71■■□□□ 1.39
HMGN1-206ENST00000431390 MEGF6O75095 1541 aa23.71■■□□□ 1.39
HMGN1-206ENST00000431390 IFT57Q9NWB7 429 aa23.7■■□□□ 1.38
HMGN1-206ENST00000431390 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.7■■□□□ 1.388e-8■■□□□ 13
HMGN1-206ENST00000431390 SUPT16HQ9Y5B9 1047 aaKnown RBP23.69■■□□□ 1.38
HMGN1-206ENST00000431390 SBF2Q86WG5 1849 aa23.69■■□□□ 1.38
HMGN1-206ENST00000431390 GNAI1P63096 354 aa23.69■■□□□ 1.38
HMGN1-206ENST00000431390 THUMPD2Q9BTF0 503 aaKnown RBP23.69■■□□□ 1.38
HMGN1-206ENST00000431390 RCAN3Q9UKA8 241 aa23.69■■□□□ 1.38
HMGN1-206ENST00000431390 FANCIQ9NVI1 1328 aa23.68■■□□□ 1.38
HMGN1-206ENST00000431390 ZNF853P0CG23 659 aa23.68■■□□□ 1.38
HMGN1-206ENST00000431390 DCTN1Q14203 1278 aa23.68■■□□□ 1.38
HMGN1-206ENST00000431390 AKAP4Q5JQC9 854 aa23.68■■□□□ 1.38
HMGN1-206ENST00000431390 OVOS2A0A0G2JMS6 1433 aa23.67■■□□□ 1.38
HMGN1-206ENST00000431390 ZNF530Q6P9A1 599 aaPredicted RBP23.67■■□□□ 1.38
HMGN1-206ENST00000431390 MCM10Q7L590 875 aa23.67■■□□□ 1.38
HMGN1-206ENST00000431390 NBPF14Q5TI25 921 aa23.66■■□□□ 1.38
HMGN1-206ENST00000431390 CFAP44Q96MT7 982 aa23.66■■□□□ 1.38
HMGN1-206ENST00000431390 SPG7Q9UQ90 795 aa23.66■■□□□ 1.38
HMGN1-206ENST00000431390 THRAP3Q9Y2W1 955 aaKnown RBP23.66■■□□□ 1.38
HMGN1-206ENST00000431390 VIRMAQ69YN4 1812 aaKnown RBP23.66■■□□□ 1.38
HMGN1-206ENST00000431390 WNK3Q9BYP7 1800 aa23.66■■□□□ 1.38
HMGN1-206ENST00000431390 C1orf141Q5JVX7 400 aa23.65■■□□□ 1.38
HMGN1-206ENST00000431390 ADAMTS7Q9UKP4 1686 aa23.64■■□□□ 1.38
HMGN1-206ENST00000431390 RGPD3A6NKT7 1758 aaPredicted RBP23.64■■□□□ 1.38
HMGN1-206ENST00000431390 RGPD4Q7Z3J3 1758 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms