RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 SSH1Q8WYL5 1049 aa18.37■□□□□ 0.53
CALD1-207ENST00000430085 ALDH1L2Q3SY69 923 aa18.36■□□□□ 0.53
CALD1-207ENST00000430085 USHBP1Q8N6Y0 703 aa18.36■□□□□ 0.53
CALD1-207ENST00000430085 COL22A1Q8NFW1 1626 aaPredicted RBP18.36■□□□□ 0.53
CALD1-207ENST00000430085 MS4A1P11836 297 aa18.35■□□□□ 0.53
CALD1-207ENST00000430085 MED1Q15648 1581 aaPredicted RBP18.35■□□□□ 0.53
CALD1-207ENST00000430085 JCADQ9P266 1359 aa18.35■□□□□ 0.53
CALD1-207ENST00000430085 NBPF6Q5VWK0 638 aa18.35■□□□□ 0.53
CALD1-207ENST00000430085 NBPF4Q96M43 638 aa18.35■□□□□ 0.53
CALD1-207ENST00000430085 COG6Q9Y2V7 657 aa18.35■□□□□ 0.53
CALD1-207ENST00000430085 KIF16BQ96L93 1317 aa18.34■□□□□ 0.53
CALD1-207ENST00000430085 HTATSF1O43719 755 aaKnown RBP18.33■□□□□ 0.53
CALD1-207ENST00000430085 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.53
CALD1-207ENST00000430085 FTSJ3Q8IY81 847 aaKnown RBP18.33■□□□□ 0.53
CALD1-207ENST00000430085 VAMP4O75379 141 aa18.33■□□□□ 0.52
CALD1-207ENST00000430085 ANKRD24Q8TF21 1146 aa18.33■□□□□ 0.52
CALD1-207ENST00000430085 ABCA3Q99758 1704 aa18.32■□□□□ 0.52
CALD1-207ENST00000430085 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
CALD1-207ENST00000430085 GNAT3A8MTJ3 354 aa18.32■□□□□ 0.52
CALD1-207ENST00000430085 CHL1O00533 1208 aa18.32■□□□□ 0.52
CALD1-207ENST00000430085 TWISTNBQ3B726 338 aaPredicted RBP18.32■□□□□ 0.52
CALD1-207ENST00000430085 CLUAP1Q96AJ1 413 aa18.32■□□□□ 0.52
CALD1-207ENST00000430085 IPO8O15397 1037 aaKnown RBP18.31■□□□□ 0.52
CALD1-207ENST00000430085 DZIP1LQ8IYY4 767 aaKnown RBP18.31■□□□□ 0.52
CALD1-207ENST00000430085 TSPYL6Q8N831 410 aa18.31■□□□□ 0.52
CALD1-207ENST00000430085 CRB1P82279 1406 aa18.31■□□□□ 0.52
CALD1-207ENST00000430085 MAP3K5Q99683 1374 aa18.31■□□□□ 0.52
CALD1-207ENST00000430085 RLBP1P12271 317 aa18.31■□□□□ 0.52
CALD1-207ENST00000430085 NOB1Q9ULX3 412 aaKnown RBP18.31■□□□□ 0.52
CALD1-207ENST00000430085 RGPD2P0DJD1 1756 aa18.3■□□□□ 0.52
CALD1-207ENST00000430085 ELL2O00472 640 aaPredicted RBP18.3■□□□□ 0.52
CALD1-207ENST00000430085 HAP1P54257 671 aaPredicted RBP18.3■□□□□ 0.52
CALD1-207ENST00000430085 AAMPQ13685 434 aa18.3■□□□□ 0.52
CALD1-207ENST00000430085 ATF7IPQ6VMQ6 1270 aa18.3■□□□□ 0.52
CALD1-207ENST00000430085 C8orf58Q8NAV2 365 aa18.3■□□□□ 0.52
CALD1-207ENST00000430085 CABLES1Q8TDN4 633 aa18.3■□□□□ 0.52
CALD1-207ENST00000430085 TNNQ9UQP3 1299 aa18.3■□□□□ 0.52
CALD1-207ENST00000430085 AXIN2Q9Y2T1 843 aa18.29■□□□□ 0.52
CALD1-207ENST00000430085 TRIM27P14373 513 aa18.29■□□□□ 0.52
CALD1-207ENST00000430085 BRPF1P55201 1214 aaPredicted RBP18.29■□□□□ 0.52
CALD1-207ENST00000430085 CENPQQ7L2Z9 268 aaPredicted RBP18.29■□□□□ 0.52
CALD1-207ENST00000430085 MVPQ14764 893 aaKnown RBP18.27■□□□□ 0.52
CALD1-207ENST00000430085 TSPYL4Q9UJ04 414 aa18.27■□□□□ 0.52
CALD1-207ENST00000430085 RGPD5Q99666 1765 aa18.27■□□□□ 0.52
CALD1-207ENST00000430085 NUTM2BA6NNL0 878 aaPredicted RBP18.27■□□□□ 0.51
CALD1-207ENST00000430085 NUTM2EB1AL46 878 aaPredicted RBP18.27■□□□□ 0.51
CALD1-207ENST00000430085 NUTM2AQ8IVF1 878 aaPredicted RBP18.27■□□□□ 0.51
CALD1-207ENST00000430085 ERBB3P21860 1342 aa18.27■□□□□ 0.51
CALD1-207ENST00000430085 KIAA0232Q92628 1395 aa18.27■□□□□ 0.51
CALD1-207ENST00000430085 NCAPD2Q15021 1401 aa18.26■□□□□ 0.51
CALD1-207ENST00000430085 LRRC37A3O60309 1634 aa18.26■□□□□ 0.51
CALD1-207ENST00000430085 LRP6O75581 1613 aa18.26■□□□□ 0.51
CALD1-207ENST00000430085 PLEKHO1Q53GL0 409 aaPredicted RBP18.26■□□□□ 0.51
CALD1-207ENST00000430085 SPATA31A6Q5VVP1 1343 aa18.26■□□□□ 0.51
CALD1-207ENST00000430085 KDM2BQ8NHM5 1336 aa18.26■□□□□ 0.51
CALD1-207ENST00000430085 CAMTA1Q9Y6Y1 1673 aa18.26■□□□□ 0.51
CALD1-207ENST00000430085 AMOTQ4VCS5 1084 aa18.25■□□□□ 0.51
CALD1-207ENST00000430085 MRPL50Q8N5N7 158 aaKnown RBP18.25■□□□□ 0.51
CALD1-207ENST00000430085 ABCC6O95255 1503 aa18.25■□□□□ 0.51
CALD1-207ENST00000430085 MIS18AQ9NYP9 233 aa18.24■□□□□ 0.51
CALD1-207ENST00000430085 CPDO75976 1380 aa18.23■□□□□ 0.51
CALD1-207ENST00000430085 ITPRIPQ8IWB1 547 aa18.23■□□□□ 0.51
CALD1-207ENST00000430085 IL17REQ8NFR9 667 aa18.23■□□□□ 0.51
CALD1-207ENST00000430085 ARHGAP45Q92619 1136 aa18.23■□□□□ 0.51
CALD1-207ENST00000430085 ZNF530Q6P9A1 599 aaPredicted RBP18.23■□□□□ 0.51
CALD1-207ENST00000430085 DDX19BQ9UMR2 479 aa18.23■□□□□ 0.51
CALD1-207ENST00000430085 COL18A1P39060 1754 aa18.22■□□□□ 0.51
CALD1-207ENST00000430085 TCERG1O14776 1098 aaKnown RBP18.22■□□□□ 0.51
CALD1-207ENST00000430085 CSB-PGBD3P0DP91 1061 aa18.22■□□□□ 0.51
CALD1-207ENST00000430085 KRT24Q2M2I5 525 aa18.22■□□□□ 0.51
CALD1-207ENST00000430085 NLRP2Q9NX02 1062 aa18.22■□□□□ 0.51
CALD1-207ENST00000430085 ADAMTS2O95450 1211 aa18.21■□□□□ 0.51
CALD1-207ENST00000430085 CHRNA2Q15822 529 aa18.21■□□□□ 0.51
CALD1-207ENST00000430085 AKAP4Q5JQC9 854 aa18.21■□□□□ 0.51
CALD1-207ENST00000430085 BABAM1Q9NWV8 329 aa18.21■□□□□ 0.51
CALD1-207ENST00000430085 TAF7Q15545 349 aaPredicted RBP18.21■□□□□ 0.51
CALD1-207ENST00000430085 C1orf141Q5JVX7 400 aa18.21■□□□□ 0.51
CALD1-207ENST00000430085 TMEM57Q8N5G2 664 aa18.21■□□□□ 0.51
CALD1-207ENST00000430085 LMO7Q8WWI1 1683 aa18.21■□□□□ 0.5
CALD1-207ENST00000430085 FAM208AQ9UK61 1670 aaKnown RBP18.2■□□□□ 0.5
CALD1-207ENST00000430085 RAPGEF4Q8WZA2 1011 aa18.19■□□□□ 0.5
CALD1-207ENST00000430085 CEMIPQ8WUJ3 1361 aa18.19■□□□□ 0.5
CALD1-207ENST00000430085 API5Q9BZZ5 524 aaKnown RBP18.18■□□□□ 0.5
CALD1-207ENST00000430085 PRDM11Q9NQV5 511 aa18.18■□□□□ 0.5
CALD1-207ENST00000430085 RBM19Q9Y4C8 960 aaKnown RBP18.17■□□□□ 0.5
CALD1-207ENST00000430085 IGHDP01880 384 aa18.17■□□□□ 0.5
CALD1-207ENST00000430085 MEX3CQ5U5Q3 659 aaKnown RBP18.17■□□□□ 0.5
CALD1-207ENST00000430085 TATP17735 454 aaPredicted RBP18.16■□□□□ 0.5
CALD1-207ENST00000430085 TEFQ10587 303 aa18.16■□□□□ 0.5
CALD1-207ENST00000430085 CHMP4BQ9H444 224 aaKnown RBP18.16■□□□□ 0.5
CALD1-207ENST00000430085 LGR6Q9HBX8 967 aa18.16■□□□□ 0.5
CALD1-207ENST00000430085 PCDHB15Q9Y5E8 787 aa18.16■□□□□ 0.5
CALD1-207ENST00000430085 SOS1Q07889 1333 aaPredicted RBP18.15■□□□□ 0.5
CALD1-207ENST00000430085 PLCH1Q4KWH8 1693 aa18.15■□□□□ 0.5
CALD1-207ENST00000430085 MPRIPQ6WCQ1 1025 aa18.15■□□□□ 0.5
CALD1-207ENST00000430085 C8orf37Q96NL8 207 aa18.15■□□□□ 0.5
CALD1-207ENST00000430085 RWDD1Q9H446 243 aaPredicted RBP18.15■□□□□ 0.5
CALD1-207ENST00000430085 ABCC4O15439 1325 aa18.15■□□□□ 0.5
CALD1-207ENST00000430085 COL14A1Q05707 1796 aaKnown RBP18.14■□□□□ 0.49
CALD1-207ENST00000430085 OVOS2A0A0G2JMS6 1433 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms