RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 NLRP2Q9NX02 1062 aa28.53■■■□□ 2.16
VSX1-205ENST00000429762 LMO7Q8WWI1 1683 aa28.53■■■□□ 2.16
VSX1-205ENST00000429762 CSB-PGBD3P0DP91 1061 aa28.53■■■□□ 2.16
VSX1-205ENST00000429762 CANXP27824 592 aaKnown RBP28.53■■■□□ 2.16
VSX1-205ENST00000429762 TSPYL6Q8N831 410 aa28.52■■■□□ 2.16
VSX1-205ENST00000429762 PRDM11Q9NQV5 511 aa28.52■■■□□ 2.16
VSX1-205ENST00000429762 MAP3K5Q99683 1374 aa28.52■■■□□ 2.16
VSX1-205ENST00000429762 GNAT3A8MTJ3 354 aa28.51■■■□□ 2.16
VSX1-205ENST00000429762 ELL2O00472 640 aaPredicted RBP28.51■■■□□ 2.16
VSX1-205ENST00000429762 MIS18AQ9NYP9 233 aa28.51■■■□□ 2.15
VSX1-205ENST00000429762 TNNQ9UQP3 1299 aa28.51■■■□□ 2.15
VSX1-205ENST00000429762 CT47B1P0C2W7 299 aaPredicted RBP28.5■■■□□ 2.15
VSX1-205ENST00000429762 SSH1Q8WYL5 1049 aa28.5■■■□□ 2.15
VSX1-205ENST00000429762 AHDC1Q5TGY3 1603 aaPredicted RBP28.49■■■□□ 2.15
VSX1-205ENST00000429762 SMC4Q9NTJ3 1288 aa28.49■■■□□ 2.15
VSX1-205ENST00000429762 ABCC6O95255 1503 aa28.49■■■□□ 2.15
VSX1-205ENST00000429762 FAM208AQ9UK61 1670 aaKnown RBP28.49■■■□□ 2.15
VSX1-205ENST00000429762 C8orf58Q8NAV2 365 aa28.48■■■□□ 2.15
VSX1-205ENST00000429762 LRRC37A3O60309 1634 aa28.48■■■□□ 2.15
VSX1-205ENST00000429762 CHL1O00533 1208 aa28.47■■■□□ 2.15
VSX1-205ENST00000429762 KRT24Q2M2I5 525 aa28.47■■■□□ 2.15
VSX1-205ENST00000429762 IL17REQ8NFR9 667 aa28.47■■■□□ 2.15
VSX1-205ENST00000429762 CCDC136Q96JN2 1154 aa28.47■■■□□ 2.15
VSX1-205ENST00000429762 PIP4K2BP78356 416 aa28.46■■■□□ 2.15
VSX1-205ENST00000429762 ZNF530Q6P9A1 599 aaPredicted RBP28.46■■■□□ 2.15
VSX1-205ENST00000429762 PANK1Q8TE04 598 aa28.46■■■□□ 2.15
VSX1-205ENST00000429762 PLEKHO1Q53GL0 409 aaPredicted RBP28.45■■■□□ 2.14
VSX1-205ENST00000429762 TCERG1O14776 1098 aaKnown RBP28.44■■■□□ 2.14
VSX1-205ENST00000429762 HTATSF1O43719 755 aaKnown RBP28.44■■■□□ 2.14
VSX1-205ENST00000429762 VAMP4O75379 141 aa28.44■■■□□ 2.14
VSX1-205ENST00000429762 TWISTNBQ3B726 338 aaPredicted RBP28.43■■■□□ 2.14
VSX1-205ENST00000429762 AEBP2Q6ZN18 517 aaPredicted RBP28.42■■■□□ 2.14
VSX1-205ENST00000429762 PHLPP1O60346 1717 aa28.42■■■□□ 2.14
VSX1-205ENST00000429762 TSPYL4Q9UJ04 414 aa28.42■■■□□ 2.14
VSX1-205ENST00000429762 MEGF6O75095 1541 aa28.41■■■□□ 2.14
VSX1-205ENST00000429762 CLUAP1Q96AJ1 413 aa28.41■■■□□ 2.14
VSX1-205ENST00000429762 LGR6Q9HBX8 967 aa28.41■■■□□ 2.14
VSX1-205ENST00000429762 RLBP1P12271 317 aa28.4■■■□□ 2.14
VSX1-205ENST00000429762 AMOTQ4VCS5 1084 aa28.4■■■□□ 2.14
VSX1-205ENST00000429762 RAPGEF4Q8WZA2 1011 aa28.4■■■□□ 2.14
VSX1-205ENST00000429762 COL5A2P05997 1499 aaPredicted RBP28.39■■■□□ 2.14
VSX1-205ENST00000429762 COG6Q9Y2V7 657 aa28.39■■■□□ 2.14
VSX1-205ENST00000429762 MPRIPQ6WCQ1 1025 aa28.39■■■□□ 2.13
VSX1-205ENST00000429762 PDE3AQ14432 1141 aa28.38■■■□□ 2.13
VSX1-205ENST00000429762 AKAP4Q5JQC9 854 aa28.38■■■□□ 2.13
VSX1-205ENST00000429762 NOB1Q9ULX3 412 aaKnown RBP28.38■■■□□ 2.13
VSX1-205ENST00000429762 STRN4Q9NRL3 753 aa28.37■■■□□ 2.13
VSX1-205ENST00000429762 COL16A1Q07092 1604 aaPredicted RBP28.37■■■□□ 2.13
VSX1-205ENST00000429762 VIRMAQ69YN4 1812 aaKnown RBP28.37■■■□□ 2.13
VSX1-205ENST00000429762 TOM1O60784 492 aa28.37■■■□□ 2.13
VSX1-205ENST00000429762 TATP17735 454 aaPredicted RBP28.37■■■□□ 2.13
VSX1-205ENST00000429762 C1orf141Q5JVX7 400 aa28.37■■■□□ 2.13
VSX1-205ENST00000429762 ZKSCAN2Q63HK3 967 aa28.37■■■□□ 2.13
VSX1-205ENST00000429762 ALDH1L2Q3SY69 923 aa28.36■■■□□ 2.13
VSX1-205ENST00000429762 TOM1L2Q6ZVM7 507 aa28.36■■■□□ 2.13
VSX1-205ENST00000429762 WDR17Q8IZU2 1322 aa28.36■■■□□ 2.13
VSX1-205ENST00000429762 COL22A1Q8NFW1 1626 aaPredicted RBP28.35■■■□□ 2.13
VSX1-205ENST00000429762 CEMIPQ8WUJ3 1361 aa28.34■■■□□ 2.13
VSX1-205ENST00000429762 UBAP1LF5GYI3 381 aa28.34■■■□□ 2.13
VSX1-205ENST00000429762 MRPL50Q8N5N7 158 aaKnown RBP28.33■■■□□ 2.13
VSX1-205ENST00000429762 TRIM27P14373 513 aa28.32■■■□□ 2.12
VSX1-205ENST00000429762 TAF7Q15545 349 aaPredicted RBP28.32■■■□□ 2.12
VSX1-205ENST00000429762 LARP1Q6PKG0 1096 aaKnown RBP28.32■■■□□ 2.12
VSX1-205ENST00000429762 RNMTO43148 476 aaKnown RBP28.31■■■□□ 2.12
VSX1-205ENST00000429762 ZNF428Q96B54 188 aa28.31■■■□□ 2.12
VSX1-205ENST00000429762 EVA1CP58658 441 aa28.3■■■□□ 2.12
VSX1-205ENST00000429762 KIF16BQ96L93 1317 aa28.3■■■□□ 2.12
VSX1-205ENST00000429762 ATF7IPQ6VMQ6 1270 aa28.3■■■□□ 2.12
VSX1-205ENST00000429762 FTSJ3Q8IY81 847 aaKnown RBP28.3■■■□□ 2.12
VSX1-205ENST00000429762 DZIP1LQ8IYY4 767 aaKnown RBP28.3■■■□□ 2.12
VSX1-205ENST00000429762 BTG4Q9NY30 223 aa28.29■■■□□ 2.12
VSX1-205ENST00000429762 PELP1Q8IZL8 1130 aaKnown RBP28.28■■■□□ 2.12
VSX1-205ENST00000429762 TEFQ10587 303 aa28.27■■■□□ 2.12
VSX1-205ENST00000429762 SPG7Q9UQ90 795 aa28.27■■■□□ 2.12
VSX1-205ENST00000429762 PKD1L3Q7Z443 1732 aa28.27■■■□□ 2.12
VSX1-205ENST00000429762 COL14A1Q05707 1796 aaKnown RBP28.25■■■□□ 2.11
VSX1-205ENST00000429762 KCNQ3O43525 872 aa28.25■■■□□ 2.11
VSX1-205ENST00000429762 PHKG2P15735 406 aa28.25■■■□□ 2.11
VSX1-205ENST00000429762 USP35Q9P2H5 1018 aa28.25■■■□□ 2.11
VSX1-205ENST00000429762 KDM3BQ7LBC6 1761 aa28.25■■■□□ 2.11
VSX1-205ENST00000429762 ADAMTS2O95450 1211 aa28.24■■■□□ 2.11
VSX1-205ENST00000429762 PARP4Q9UKK3 1724 aaKnown RBP28.24■■■□□ 2.11
VSX1-205ENST00000429762 OVOS2A0A0G2JMS6 1433 aa28.24■■■□□ 2.11
VSX1-205ENST00000429762 BRPF1P55201 1214 aaPredicted RBP28.24■■■□□ 2.11
VSX1-205ENST00000429762 CARD10Q9BWT7 1032 aa28.24■■■□□ 2.11
VSX1-205ENST00000429762 KDM6AO15550 1401 aaPredicted RBP28.23■■■□□ 2.11
VSX1-205ENST00000429762 NUTM2BA6NNL0 878 aaPredicted RBP28.23■■■□□ 2.11
VSX1-205ENST00000429762 NUTM2EB1AL46 878 aaPredicted RBP28.23■■■□□ 2.11
VSX1-205ENST00000429762 IPO8O15397 1037 aaKnown RBP28.23■■■□□ 2.11
VSX1-205ENST00000429762 NUTM2AQ8IVF1 878 aaPredicted RBP28.23■■■□□ 2.11
VSX1-205ENST00000429762 ADAMTS7Q9UKP4 1686 aa28.23■■■□□ 2.11
VSX1-205ENST00000429762 CYP27B1O15528 508 aa28.22■■■□□ 2.11
VSX1-205ENST00000429762 MVPQ14764 893 aaKnown RBP28.22■■■□□ 2.11
VSX1-205ENST00000429762 TMEM57Q8N5G2 664 aa28.22■■■□□ 2.11
VSX1-205ENST00000429762 NECTIN2Q92692 538 aa28.22■■■□□ 2.11
VSX1-205ENST00000429762 BTBD11A6QL63 1104 aa28.21■■■□□ 2.11
VSX1-205ENST00000429762 BABAM1Q9NWV8 329 aa28.21■■■□□ 2.11
VSX1-205ENST00000429762 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.21■■■□□ 2.11
VSX1-205ENST00000429762 SIPA1L3O60292 1781 aaPredicted RBP28.21■■■□□ 2.11
VSX1-205ENST00000429762 SCN11AQ9UI33 1791 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 383.5 ms