RNA–Protein interactions for RNA: ENST00000428830.6

CHEK1-203, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-203ENST00000428830 THUMPD2Q9BTF0 503 aaKnown RBP16.83■□□□□ 0.28
CHEK1-203ENST00000428830 MAP3K5Q99683 1374 aa16.82■□□□□ 0.28
CHEK1-203ENST00000428830 HTATSF1O43719 755 aaKnown RBP16.82■□□□□ 0.28
CHEK1-203ENST00000428830 HSPA1LP34931 641 aa16.82■□□□□ 0.28
CHEK1-203ENST00000428830 LARP1Q6PKG0 1096 aaKnown RBP16.82■□□□□ 0.28
CHEK1-203ENST00000428830 CARD10Q9BWT7 1032 aa16.82■□□□□ 0.28
CHEK1-203ENST00000428830 SUPT16HQ9Y5B9 1047 aaKnown RBP16.82■□□□□ 0.28
CHEK1-203ENST00000428830 MEGF6O75095 1541 aa16.82■□□□□ 0.28
CHEK1-203ENST00000428830 CRB1P82279 1406 aa16.82■□□□□ 0.28
CHEK1-203ENST00000428830 TATP17735 454 aaPredicted RBP16.82■□□□□ 0.28
CHEK1-203ENST00000428830 DCTN1Q14203 1278 aa16.82■□□□□ 0.28
CHEK1-203ENST00000428830 SPATA31A6Q5VVP1 1343 aa16.81■□□□□ 0.28
CHEK1-203ENST00000428830 MCM10Q7L590 875 aa16.81■□□□□ 0.28
CHEK1-203ENST00000428830 RCAN3Q9UKA8 241 aa16.81■□□□□ 0.28
CHEK1-203ENST00000428830 PARP4Q9UKK3 1724 aaKnown RBP16.81■□□□□ 0.28
CHEK1-203ENST00000428830 NWD2Q9ULI1 1742 aa16.81■□□□□ 0.28
CHEK1-203ENST00000428830 FANCIQ9NVI1 1328 aa16.81■□□□□ 0.28
CHEK1-203ENST00000428830 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
CHEK1-203ENST00000428830 IFT57Q9NWB7 429 aa16.8■□□□□ 0.28
CHEK1-203ENST00000428830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.283e-6■■□□□ 11.4
CHEK1-203ENST00000428830 GNAI1P63096 354 aa16.8■□□□□ 0.28
CHEK1-203ENST00000428830 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
CHEK1-203ENST00000428830 NRAPQ86VF7 1730 aa16.79■□□□□ 0.28
CHEK1-203ENST00000428830 LRRC37A3O60309 1634 aa16.79■□□□□ 0.28
CHEK1-203ENST00000428830 AKAP4Q5JQC9 854 aa16.79■□□□□ 0.28
CHEK1-203ENST00000428830 TSR2Q969E8 191 aaKnown RBP16.79■□□□□ 0.28
CHEK1-203ENST00000428830 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
CHEK1-203ENST00000428830 C1orf141Q5JVX7 400 aa16.78■□□□□ 0.28
CHEK1-203ENST00000428830 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
CHEK1-203ENST00000428830 LAS1LQ9Y4W2 734 aaKnown RBP16.78■□□□□ 0.28
CHEK1-203ENST00000428830 OVOS2A0A0G2JMS6 1433 aa16.78■□□□□ 0.28
CHEK1-203ENST00000428830 ZNF853P0CG23 659 aa16.77■□□□□ 0.28
CHEK1-203ENST00000428830 VIRMAQ69YN4 1812 aaKnown RBP16.77■□□□□ 0.28
CHEK1-203ENST00000428830 SLIT2O94813 1529 aa16.77■□□□□ 0.28
CHEK1-203ENST00000428830 GTF3C3Q9Y5Q9 886 aa16.77■□□□□ 0.27
CHEK1-203ENST00000428830 IL2RBP14784 551 aa16.76■□□□□ 0.27
CHEK1-203ENST00000428830 IL17REQ8NFR9 667 aa16.75■□□□□ 0.27
CHEK1-203ENST00000428830 USP35Q9P2H5 1018 aa16.75■□□□□ 0.27
CHEK1-203ENST00000428830 CEMIPQ8WUJ3 1361 aa16.75■□□□□ 0.27
CHEK1-203ENST00000428830 LRP6O75581 1613 aa16.75■□□□□ 0.27
CHEK1-203ENST00000428830 NEFLP07196 543 aa16.75■□□□□ 0.27
CHEK1-203ENST00000428830 RNF123Q5XPI4 1314 aa16.75■□□□□ 0.27
CHEK1-203ENST00000428830 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
CHEK1-203ENST00000428830 CHL1O00533 1208 aa16.74■□□□□ 0.27
CHEK1-203ENST00000428830 CT47B1P0C2W7 299 aaPredicted RBP16.74■□□□□ 0.27
CHEK1-203ENST00000428830 EXOSC9Q06265 439 aaKnown RBP16.73■□□□□ 0.27
CHEK1-203ENST00000428830 NGLY1Q96IV0 654 aa16.73■□□□□ 0.27
CHEK1-203ENST00000428830 C8orf37Q96NL8 207 aa16.73■□□□□ 0.27
CHEK1-203ENST00000428830 ADAMTS7Q9UKP4 1686 aa16.73■□□□□ 0.27
CHEK1-203ENST00000428830 MPRIPQ6WCQ1 1025 aa16.73■□□□□ 0.27
CHEK1-203ENST00000428830 IFNL2Q8IZJ0 200 aa16.73■□□□□ 0.27
CHEK1-203ENST00000428830 ZCRB1Q8TBF4 217 aaKnown RBP16.73■□□□□ 0.27
CHEK1-203ENST00000428830 PCDH11XQ9BZA7 1347 aa16.72■□□□□ 0.27
CHEK1-203ENST00000428830 PCDH11YQ9BZA8 1340 aa16.72■□□□□ 0.27
CHEK1-203ENST00000428830 PHKG2P15735 406 aa16.72■□□□□ 0.27
CHEK1-203ENST00000428830 LGR6Q9HBX8 967 aa16.72■□□□□ 0.27
CHEK1-203ENST00000428830 WNK3Q9BYP7 1800 aa16.72■□□□□ 0.27
CHEK1-203ENST00000428830 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
CHEK1-203ENST00000428830 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
CHEK1-203ENST00000428830 SPATA31A1Q5TZJ5 1347 aa16.71■□□□□ 0.26
CHEK1-203ENST00000428830 SHANK3Q9BYB0 1731 aa16.7■□□□□ 0.26
CHEK1-203ENST00000428830 CYP27B1O15528 508 aa16.7■□□□□ 0.26
CHEK1-203ENST00000428830 RNMTO43148 476 aaKnown RBP16.7■□□□□ 0.26
CHEK1-203ENST00000428830 UNC5CLQ8IV45 518 aa16.7■□□□□ 0.26
CHEK1-203ENST00000428830 FNBP4Q8N3X1 1017 aaPredicted RBP16.7■□□□□ 0.26
CHEK1-203ENST00000428830 BABAM1Q9NWV8 329 aa16.7■□□□□ 0.26
CHEK1-203ENST00000428830 BCL9LQ86UU0 1499 aa16.7■□□□□ 0.26
CHEK1-203ENST00000428830 RRP1P56182 461 aaKnown RBP16.7■□□□□ 0.26
CHEK1-203ENST00000428830 TEFQ10587 303 aa16.7■□□□□ 0.26
CHEK1-203ENST00000428830 TAF7Q15545 349 aaPredicted RBP16.7■□□□□ 0.26
CHEK1-203ENST00000428830 TSPYL4Q9UJ04 414 aa16.7■□□□□ 0.26
CHEK1-203ENST00000428830 THRAP3Q9Y2W1 955 aaKnown RBP16.7■□□□□ 0.26
CHEK1-203ENST00000428830 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
CHEK1-203ENST00000428830 SPATA31A5Q5VU36 1347 aa16.69■□□□□ 0.26
CHEK1-203ENST00000428830 SPATA31A7Q8IWB4 1347 aa16.69■□□□□ 0.26
CHEK1-203ENST00000428830 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.68■□□□□ 0.26
CHEK1-203ENST00000428830 KDM6AO15550 1401 aaPredicted RBP16.68■□□□□ 0.26
CHEK1-203ENST00000428830 MEX3CQ5U5Q3 659 aaKnown RBP16.68■□□□□ 0.26
CHEK1-203ENST00000428830 DCAF5Q96JK2 942 aa16.68■□□□□ 0.26
CHEK1-203ENST00000428830 MIS18AQ9NYP9 233 aa16.68■□□□□ 0.26
CHEK1-203ENST00000428830 RARSP54136 660 aaKnown RBP16.68■□□□□ 0.26
CHEK1-203ENST00000428830 ZNF428Q96B54 188 aa16.68■□□□□ 0.26
CHEK1-203ENST00000428830 CDCA7Q9BWT1 371 aaPredicted RBP16.68■□□□□ 0.26
CHEK1-203ENST00000428830 SIPA1L3O60292 1781 aaPredicted RBP16.68■□□□□ 0.26
CHEK1-203ENST00000428830 FKBP8Q14318 412 aa16.67■□□□□ 0.26
CHEK1-203ENST00000428830 CCDC9Q9Y3X0 531 aaKnown RBP16.67■□□□□ 0.26
CHEK1-203ENST00000428830 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
CHEK1-203ENST00000428830 BCAR3O75815 825 aa16.66■□□□□ 0.26
CHEK1-203ENST00000428830 VPS72Q15906 364 aa16.66■□□□□ 0.26
CHEK1-203ENST00000428830 TWISTNBQ3B726 338 aaPredicted RBP16.66■□□□□ 0.26
CHEK1-203ENST00000428830 C8orf58Q8NAV2 365 aa16.66■□□□□ 0.26
CHEK1-203ENST00000428830 USP21Q9UK80 565 aa16.66■□□□□ 0.26
CHEK1-203ENST00000428830 MRC1P22897 1456 aa16.65■□□□□ 0.26
CHEK1-203ENST00000428830 IRX6P78412 446 aaPredicted RBP16.65■□□□□ 0.26
CHEK1-203ENST00000428830 TSPYL6Q8N831 410 aa16.65■□□□□ 0.26
CHEK1-203ENST00000428830 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.65■□□□□ 0.26
CHEK1-203ENST00000428830 DDX54Q8TDD1 881 aaKnown RBP16.65■□□□□ 0.26
CHEK1-203ENST00000428830 VAMP4O75379 141 aa16.64■□□□□ 0.25
CHEK1-203ENST00000428830 NKX1-1Q15270 411 aaPredicted RBP16.64■□□□□ 0.25
CHEK1-203ENST00000428830 BARGINQ6ZT62 677 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms