RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 PDGFDQ9GZP0 370 aaPredicted RBP37.73■■■■□ 3.63
LMO1-202ENST00000428101 SPON1Q9HCB6 807 aa37.73■■■■□ 3.63
LMO1-202ENST00000428101 EMILIN1Q9Y6C2 1016 aa37.72■■■■□ 3.63
LMO1-202ENST00000428101 CGNL1Q0VF96 1302 aa37.71■■■■□ 3.63
LMO1-202ENST00000428101 STK32BQ9NY57 414 aa37.7■■■■□ 3.63
LMO1-202ENST00000428101 SLC15A2Q16348 729 aa37.69■■■■□ 3.62
LMO1-202ENST00000428101 MAP2P11137 1827 aaKnown RBP37.67■■■■□ 3.62
LMO1-202ENST00000428101 DOT1LQ8TEK3 1739 aa37.66■■■■□ 3.62
LMO1-202ENST00000428101 ANKRD26Q9UPS8 1709 aa37.66■■■■□ 3.62
LMO1-202ENST00000428101 PAPPAQ13219 1627 aa37.65■■■■□ 3.62
LMO1-202ENST00000428101 PRIM1P49642 420 aaKnown RBP37.65■■■■□ 3.62
LMO1-202ENST00000428101 RAPGEF4Q8WZA2 1011 aa37.65■■■■□ 3.62
LMO1-202ENST00000428101 LRRC4BQ9NT99 713 aa37.64■■■■□ 3.62
LMO1-202ENST00000428101 NSD2O96028 1365 aa37.61■■■■□ 3.61
LMO1-202ENST00000428101 PPM1GO15355 546 aaPredicted RBP37.61■■■■□ 3.61
LMO1-202ENST00000428101 TATP17735 454 aaPredicted RBP37.61■■■■□ 3.61
LMO1-202ENST00000428101 SYTL4Q96C24 671 aaPredicted RBP37.61■■■■□ 3.61
LMO1-202ENST00000428101 ZBTB7AO95365 584 aa37.6■■■■□ 3.61
LMO1-202ENST00000428101 WASHC2AQ641Q2 1341 aa37.6■■■■□ 3.61
LMO1-202ENST00000428101 PANK3Q9H999 370 aa37.59■■■■□ 3.61
LMO1-202ENST00000428101 POLKQ9UBT6 870 aa37.59■■■■□ 3.61
LMO1-202ENST00000428101 PPP1R1BQ9UD71 204 aaPredicted RBP37.59■■■■□ 3.61
LMO1-202ENST00000428101 NCAPD2Q15021 1401 aa37.56■■■■□ 3.6
LMO1-202ENST00000428101 ZNF827Q17R98 1081 aa37.55■■■■□ 3.6
LMO1-202ENST00000428101 SLC27A3Q5K4L6 730 aa37.55■■■■□ 3.6
LMO1-202ENST00000428101 LY75O60449 1722 aa37.53■■■■□ 3.6
LMO1-202ENST00000428101 PTGER2P43116 358 aa37.53■■■■□ 3.6
LMO1-202ENST00000428101 ATF5Q9Y2D1 282 aaPredicted RBP37.53■■■■□ 3.6
LMO1-202ENST00000428101 PCDH11XQ9BZA7 1347 aa37.52■■■■□ 3.6
LMO1-202ENST00000428101 PCDH11YQ9BZA8 1340 aa37.52■■■■□ 3.6
LMO1-202ENST00000428101 TNNT2P45379 298 aaPredicted RBP37.51■■■■□ 3.6
LMO1-202ENST00000428101 AKT1S1Q96B36 256 aa37.5■■■■□ 3.59
LMO1-202ENST00000428101 EYA1Q99502 592 aa37.5■■■■□ 3.59
LMO1-202ENST00000428101 CYP27B1O15528 508 aa37.49■■■■□ 3.59
LMO1-202ENST00000428101 KCNQ4P56696 695 aa37.49■■■■□ 3.59
LMO1-202ENST00000428101 PKD1L3Q7Z443 1732 aa37.49■■■■□ 3.59
LMO1-202ENST00000428101 MTFR1LQ9H019 292 aa37.48■■■■□ 3.59
LMO1-202ENST00000428101 SGIP1Q9BQI5 828 aa37.44■■■■□ 3.58
LMO1-202ENST00000428101 QSER1Q2KHR3 1735 aa37.42■■■■□ 3.58
LMO1-202ENST00000428101 EIF4A2Q14240 407 aaKnown RBP37.42■■■■□ 3.58
LMO1-202ENST00000428101 TOGARAM1Q9Y4F4 1720 aa37.41■■■■□ 3.58
LMO1-202ENST00000428101 TUBGCP6Q96RT7 1819 aa37.4■■■■□ 3.58
LMO1-202ENST00000428101 ITGB4P16144 1822 aa37.39■■■■□ 3.58
LMO1-202ENST00000428101 CCNL1Q9UK58 526 aaPredicted RBP37.39■■■■□ 3.58
LMO1-202ENST00000428101 NKX1-1Q15270 411 aaPredicted RBP37.37■■■■□ 3.57
LMO1-202ENST00000428101 SPG7Q9UQ90 795 aa37.37■■■■□ 3.57
LMO1-202ENST00000428101 MPRIPQ6WCQ1 1025 aa37.36■■■■□ 3.57
LMO1-202ENST00000428101 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.36■■■■□ 3.57
LMO1-202ENST00000428101 PNPLA7Q6ZV29 1317 aa37.36■■■■□ 3.57
LMO1-202ENST00000428101 TFCP2L1Q9NZI6 479 aa37.35■■■■□ 3.57
LMO1-202ENST00000428101 KIF7Q2M1P5 1343 aa37.35■■■■□ 3.57
LMO1-202ENST00000428101 MORC1Q86VD1 984 aa37.33■■■■□ 3.57
LMO1-202ENST00000428101 KNSTRNQ9Y448 316 aa37.33■■■■□ 3.57
LMO1-202ENST00000428101 SLC16A10Q8TF71 515 aa37.3■■■■□ 3.56
LMO1-202ENST00000428101 FHDC1Q9C0D6 1143 aaPredicted RBP37.3■■■■□ 3.56
LMO1-202ENST00000428101 IGSF1Q8N6C5 1336 aa37.3■■■■□ 3.56
LMO1-202ENST00000428101 PALLDQ8WX93 1383 aa37.29■■■■□ 3.56
LMO1-202ENST00000428101 PIGBQ92521 554 aa37.28■■■■□ 3.56
LMO1-202ENST00000428101 SYT17Q9BSW7 474 aa37.28■■■■□ 3.56
LMO1-202ENST00000428101 AMER1Q5JTC6 1135 aaPredicted RBP37.27■■■■□ 3.56
LMO1-202ENST00000428101 ARXQ96QS3 562 aa37.27■■■■□ 3.56
LMO1-202ENST00000428101 C5P01031 1676 aa37.27■■■■□ 3.56
LMO1-202ENST00000428101 COL24A1Q17RW2 1714 aa37.27■■■■□ 3.56
LMO1-202ENST00000428101 PHKG2P15735 406 aa37.26■■■■□ 3.56
LMO1-202ENST00000428101 TAF1LQ8IZX4 1826 aa37.26■■■■□ 3.55
LMO1-202ENST00000428101 IFNL2Q8IZJ0 200 aa37.25■■■■□ 3.55
LMO1-202ENST00000428101 PLEKHG2Q9H7P9 1386 aa37.24■■■■□ 3.55
LMO1-202ENST00000428101 SMARCC1Q92922 1105 aaPredicted RBP37.23■■■■□ 3.55
LMO1-202ENST00000428101 DCAF8L1A6NGE4 600 aa37.22■■■■□ 3.55
LMO1-202ENST00000428101 COL23A1Q86Y22 540 aaPredicted RBP37.2■■■■□ 3.55
LMO1-202ENST00000428101 PER1O15534 1290 aaPredicted RBP37.18■■■■□ 3.54
LMO1-202ENST00000428101 MAP3K5Q99683 1374 aa37.17■■■■□ 3.54
LMO1-202ENST00000428101 TMOD3Q9NYL9 352 aa37.17■■■■□ 3.54
LMO1-202ENST00000428101 UTRNP46939 3433 aa37.15■■■■□ 3.54
LMO1-202ENST00000428101 HMGB2P26583 209 aaKnown RBP37.15■■■■□ 3.54
LMO1-202ENST00000428101 POLD1P28340 1107 aa37.15■■■■□ 3.54
LMO1-202ENST00000428101 AEBP1Q8IUX7 1158 aa37.15■■■■□ 3.54
LMO1-202ENST00000428101 C4BP0C0L5 1744 aa37.14■■■■□ 3.54
LMO1-202ENST00000428101 ASAP1Q9ULH1 1129 aa37.14■■■■□ 3.54
LMO1-202ENST00000428101 IL13P35225 146 aa37.13■■■■□ 3.53
LMO1-202ENST00000428101 MSH5O43196 834 aa37.12■■■■□ 3.53
LMO1-202ENST00000428101 YY1P25490 414 aa37.12■■■■□ 3.53
LMO1-202ENST00000428101 PLEKHO1Q53GL0 409 aaPredicted RBP37.12■■■■□ 3.53
LMO1-202ENST00000428101 LOC102724428A0A0B4J2F2 783 aa37.11■■■■□ 3.53
LMO1-202ENST00000428101 SIK1P57059 783 aa37.11■■■■□ 3.53
LMO1-202ENST00000428101 AMOTQ4VCS5 1084 aa37.09■■■■□ 3.53
LMO1-202ENST00000428101 SULT6B1Q6IMI4 303 aa37.08■■■■□ 3.53
LMO1-202ENST00000428101 AMIGO3Q86WK7 504 aa37.08■■■■□ 3.53
LMO1-202ENST00000428101 ATG3Q9NT62 314 aa37.08■■■■□ 3.53
LMO1-202ENST00000428101 KDRP35968 1356 aa37.07■■■■□ 3.53
LMO1-202ENST00000428101 MTHFSP49914 203 aa37.07■■■■□ 3.52
LMO1-202ENST00000428101 ZNF530Q6P9A1 599 aaPredicted RBP37.07■■■■□ 3.52
LMO1-202ENST00000428101 DCAF5Q96JK2 942 aa37.07■■■■□ 3.52
LMO1-202ENST00000428101 UBR3Q6ZT12 1888 aa37.07■■■■□ 3.52
LMO1-202ENST00000428101 ERVV-2B6SEH9 535 aa37.06■■■■□ 3.52
LMO1-202ENST00000428101 HSP90AB1P08238 724 aaKnown RBP37.06■■■■□ 3.52
LMO1-202ENST00000428101 LINC00116Q8NCU8 138 aa37.06■■■■□ 3.52
LMO1-202ENST00000428101 FLAD1Q8NFF5 587 aa37.06■■■■□ 3.52
LMO1-202ENST00000428101 CC2D1BQ5T0F9 858 aaKnown RBP37.05■■■■□ 3.52
LMO1-202ENST00000428101 AK7Q96M32 723 aa37.05■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms