RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 LRP6O75581 1613 aa20.21■□□□□ 0.83
TVP23C-203ENST00000428082 KDM2BQ8NHM5 1336 aa20.2■□□□□ 0.82
TVP23C-203ENST00000428082 PNNQ9H307 717 aaKnown RBP20.2■□□□□ 0.82
TVP23C-203ENST00000428082 C20orf194Q5TEA3 1177 aa20.19■□□□□ 0.82
TVP23C-203ENST00000428082 TCP11L2Q8N4U5 519 aa20.19■□□□□ 0.82
TVP23C-203ENST00000428082 PHACTR3Q96KR7 559 aa20.19■□□□□ 0.82
TVP23C-203ENST00000428082 NLRP2Q9NX02 1062 aa20.19■□□□□ 0.82
TVP23C-203ENST00000428082 WDR17Q8IZU2 1322 aa20.18■□□□□ 0.82
TVP23C-203ENST00000428082 MAPK8IP3Q9UPT6 1336 aa20.18■□□□□ 0.82
TVP23C-203ENST00000428082 NCAPD2Q15021 1401 aa20.18■□□□□ 0.82
TVP23C-203ENST00000428082 STRN4Q9NRL3 753 aa20.18■□□□□ 0.82
TVP23C-203ENST00000428082 EVA1CP58658 441 aa20.17■□□□□ 0.82
TVP23C-203ENST00000428082 RRP7AQ9Y3A4 280 aaKnown RBP20.17■□□□□ 0.82
TVP23C-203ENST00000428082 LARP1Q6PKG0 1096 aaKnown RBP20.16■□□□□ 0.82
TVP23C-203ENST00000428082 PDE3AQ14432 1141 aa20.15■□□□□ 0.82
TVP23C-203ENST00000428082 NEUROD2Q15784 382 aa20.15■□□□□ 0.82
TVP23C-203ENST00000428082 WWC1Q8IX03 1113 aa20.15■□□□□ 0.82
TVP23C-203ENST00000428082 FBXO41Q8TF61 875 aa20.15■□□□□ 0.82
TVP23C-203ENST00000428082 NRAPQ86VF7 1730 aa20.15■□□□□ 0.82
TVP23C-203ENST00000428082 NEFMP07197 916 aa20.15■□□□□ 0.82
TVP23C-203ENST00000428082 TOM1L2Q6ZVM7 507 aa20.15■□□□□ 0.82
TVP23C-203ENST00000428082 WDR63Q8IWG1 891 aa20.15■□□□□ 0.82
TVP23C-203ENST00000428082 AAMPQ13685 434 aa20.14■□□□□ 0.81
TVP23C-203ENST00000428082 CCDC27Q2M243 656 aa20.14■□□□□ 0.81
TVP23C-203ENST00000428082 C8orf37Q96NL8 207 aa20.14■□□□□ 0.81
TVP23C-203ENST00000428082 NWD2Q9ULI1 1742 aa20.14■□□□□ 0.81
TVP23C-203ENST00000428082 SLIT2O94813 1529 aa20.14■□□□□ 0.81
TVP23C-203ENST00000428082 TMPOP42166 694 aaKnown RBP20.14■□□□□ 0.81
TVP23C-203ENST00000428082 DDRGK1Q96HY6 314 aa20.14■□□□□ 0.81
TVP23C-203ENST00000428082 SPINK5Q9NQ38 1064 aaPredicted RBP20.12■□□□□ 0.81
TVP23C-203ENST00000428082 DLG5Q8TDM6 1919 aa20.12■□□□□ 0.81
TVP23C-203ENST00000428082 NGLY1Q96IV0 654 aa20.12■□□□□ 0.81
TVP23C-203ENST00000428082 CRB1P82279 1406 aa20.11■□□□□ 0.81
TVP23C-203ENST00000428082 NFE2L2Q16236 605 aa20.1■□□□□ 0.81
TVP23C-203ENST00000428082 PHF23Q9BUL5 403 aaPredicted RBP20.1■□□□□ 0.81
TVP23C-203ENST00000428082 CARD10Q9BWT7 1032 aa20.1■□□□□ 0.81
TVP23C-203ENST00000428082 RIPK4P57078 832 aa20.1■□□□□ 0.81
TVP23C-203ENST00000428082 MTHFSDQ2M296 383 aaKnown RBP20.1■□□□□ 0.81
TVP23C-203ENST00000428082 MEX3CQ5U5Q3 659 aaKnown RBP20.1■□□□□ 0.81
TVP23C-203ENST00000428082 USP35Q9P2H5 1018 aa20.09■□□□□ 0.81
TVP23C-203ENST00000428082 MEGF6O75095 1541 aa20.08■□□□□ 0.81
TVP23C-203ENST00000428082 NPM2Q86SE8 214 aaKnown RBP20.08■□□□□ 0.81
TVP23C-203ENST00000428082 BCL9LQ86UU0 1499 aa20.08■□□□□ 0.8
TVP23C-203ENST00000428082 CANXP27824 592 aaKnown RBP20.08■□□□□ 0.8
TVP23C-203ENST00000428082 FNBP4Q8N3X1 1017 aaPredicted RBP20.08■□□□□ 0.8
TVP23C-203ENST00000428082 RAPGEF4Q8WZA2 1011 aa20.08■□□□□ 0.8
TVP23C-203ENST00000428082 BCAR3O75815 825 aa20.07■□□□□ 0.8
TVP23C-203ENST00000428082 TRIM35Q9UPQ4 493 aa20.07■□□□□ 0.8
TVP23C-203ENST00000428082 FAM161AQ3B820 660 aa20.06■□□□□ 0.8
TVP23C-203ENST00000428082 UNC5CLQ8IV45 518 aa20.06■□□□□ 0.8
TVP23C-203ENST00000428082 MYH16Q9H6N6 1097 aa20.06■□□□□ 0.8
TVP23C-203ENST00000428082 TATP17735 454 aaPredicted RBP20.06■□□□□ 0.8
TVP23C-203ENST00000428082 GAS2L2Q8NHY3 880 aa20.04■□□□□ 0.8
TVP23C-203ENST00000428082 PARP4Q9UKK3 1724 aaKnown RBP20.04■□□□□ 0.8
TVP23C-203ENST00000428082 CT47B1P0C2W7 299 aaPredicted RBP20.04■□□□□ 0.8
TVP23C-203ENST00000428082 PLEKHO1Q53GL0 409 aaPredicted RBP20.04■□□□□ 0.8
TVP23C-203ENST00000428082 RTL5Q5HYW3 569 aaPredicted RBP20.04■□□□□ 0.8
TVP23C-203ENST00000428082 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.03■□□□□ 0.8
TVP23C-203ENST00000428082 USP21Q9UK80 565 aa20.03■□□□□ 0.8
TVP23C-203ENST00000428082 SPATA31A1Q5TZJ5 1347 aa20.03■□□□□ 0.8
TVP23C-203ENST00000428082 PKD1L3Q7Z443 1732 aa20.02■□□□□ 0.8
TVP23C-203ENST00000428082 IL2RBP14784 551 aa20.02■□□□□ 0.8
TVP23C-203ENST00000428082 AMOTQ4VCS5 1084 aa20.02■□□□□ 0.8
TVP23C-203ENST00000428082 AFF2P51816 1311 aa20.02■□□□□ 0.8
TVP23C-203ENST00000428082 OVOS2A0A0G2JMS6 1433 aa20.02■□□□□ 0.8
TVP23C-203ENST00000428082 WNK3Q9BYP7 1800 aa20.01■□□□□ 0.79
TVP23C-203ENST00000428082 SPATA31A5Q5VU36 1347 aa20.01■□□□□ 0.79
TVP23C-203ENST00000428082 SPATA31A7Q8IWB4 1347 aa20.01■□□□□ 0.79
TVP23C-203ENST00000428082 CCDC9Q9Y3X0 531 aaKnown RBP20.01■□□□□ 0.79
TVP23C-203ENST00000428082 RARSP54136 660 aaKnown RBP20■□□□□ 0.79
TVP23C-203ENST00000428082 DCTN1Q14203 1278 aa20■□□□□ 0.79
TVP23C-203ENST00000428082 ZNF530Q6P9A1 599 aaPredicted RBP20■□□□□ 0.79
TVP23C-203ENST00000428082 CLUAP1Q96AJ1 413 aa20■□□□□ 0.79
TVP23C-203ENST00000428082 PLEKHG2Q9H7P9 1386 aa20■□□□□ 0.79
TVP23C-203ENST00000428082 VPS72Q15906 364 aa20■□□□□ 0.79
TVP23C-203ENST00000428082 THUMPD2Q9BTF0 503 aaKnown RBP20■□□□□ 0.79
TVP23C-203ENST00000428082 DISP2A7MBM2 1401 aa19.99■□□□□ 0.79
TVP23C-203ENST00000428082 LMOD3Q0VAK6 560 aa19.99■□□□□ 0.79
TVP23C-203ENST00000428082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.99■□□□□ 0.792e-14■■□□□ 13.7
TVP23C-203ENST00000428082 MAP3K5Q99683 1374 aa19.99■□□□□ 0.79
TVP23C-203ENST00000428082 GNAT3A8MTJ3 354 aa19.98■□□□□ 0.79
TVP23C-203ENST00000428082 MCM10Q7L590 875 aa19.98■□□□□ 0.79
TVP23C-203ENST00000428082 SPG7Q9UQ90 795 aa19.98■□□□□ 0.79
TVP23C-203ENST00000428082 SHANK3Q9BYB0 1731 aa19.97■□□□□ 0.79
TVP23C-203ENST00000428082 NBR1Q14596 966 aa19.97■□□□□ 0.79
TVP23C-203ENST00000428082 AKAP4Q5JQC9 854 aa19.97■□□□□ 0.79
TVP23C-203ENST00000428082 THRAP3Q9Y2W1 955 aaKnown RBP19.97■□□□□ 0.79
TVP23C-203ENST00000428082 ZCRB1Q8TBF4 217 aaKnown RBP19.96■□□□□ 0.79
TVP23C-203ENST00000428082 RTF1Q92541 710 aaKnown RBP19.96■□□□□ 0.79
TVP23C-203ENST00000428082 VIRMAQ69YN4 1812 aaKnown RBP19.96■□□□□ 0.79
TVP23C-203ENST00000428082 C1orf141Q5JVX7 400 aa19.96■□□□□ 0.79
TVP23C-203ENST00000428082 CYP27B1O15528 508 aa19.95■□□□□ 0.78
TVP23C-203ENST00000428082 HTATSF1O43719 755 aaKnown RBP19.95■□□□□ 0.78
TVP23C-203ENST00000428082 PHKG2P15735 406 aa19.94■□□□□ 0.78
TVP23C-203ENST00000428082 C8orf34Q49A92 452 aa19.94■□□□□ 0.78
TVP23C-203ENST00000428082 IL17REQ8NFR9 667 aa19.94■□□□□ 0.78
TVP23C-203ENST00000428082 IL16Q14005 1332 aa19.94■□□□□ 0.78
TVP23C-203ENST00000428082 BARGINQ6ZT62 677 aa19.94■□□□□ 0.78
TVP23C-203ENST00000428082 FRAT1Q92837 279 aaPredicted RBP19.94■□□□□ 0.78
TVP23C-203ENST00000428082 DAXXQ9UER7 740 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms