RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 CNTNAP3BQ96NU0 1288 aa8.39□□□□□ -1.07
LINC02541-201ENST00000427157 CNTNAP3Q9BZ76 1288 aa8.39□□□□□ -1.07
LINC02541-201ENST00000427157 ZNF330Q9Y3S2 320 aaPredicted RBP8.39□□□□□ -1.07
LINC02541-201ENST00000427157 CDC14CA4D256 554 aa8.38□□□□□ -1.07
LINC02541-201ENST00000427157 RNF144AP50876 292 aaPredicted RBP8.38□□□□□ -1.07
LINC02541-201ENST00000427157 PRICKLE2Q7Z3G6 844 aa8.38□□□□□ -1.07
LINC02541-201ENST00000427157 VWA5B2Q8N398 1253 aa8.38□□□□□ -1.07
LINC02541-201ENST00000427157 COL25A1Q9BXS0 654 aaPredicted RBP8.38□□□□□ -1.07
LINC02541-201ENST00000427157 TBC1D2BQ9UPU7 963 aa8.38□□□□□ -1.07
LINC02541-201ENST00000427157 PCDHB11Q9Y5F2 797 aa8.38□□□□□ -1.07
LINC02541-201ENST00000427157 MEN1O00255 615 aa8.37□□□□□ -1.07
LINC02541-201ENST00000427157 RNFT1Q5M7Z0 435 aa8.37□□□□□ -1.07
LINC02541-201ENST00000427157 A0A1W2PRU2 124 aa8.36□□□□□ -1.07
LINC02541-201ENST00000427157 RHOQP17081 205 aa8.36□□□□□ -1.07
LINC02541-201ENST00000427157 TRAK2O60296 914 aa8.35□□□□□ -1.07
LINC02541-201ENST00000427157 SV2AQ7L0J3 742 aa8.35□□□□□ -1.07
LINC02541-201ENST00000427157 CYP2U1Q7Z449 544 aa8.35□□□□□ -1.07
LINC02541-201ENST00000427157 OSBPL3Q9H4L5 887 aa8.35□□□□□ -1.07
LINC02541-201ENST00000427157 CUEDC1Q9NWM3 386 aaPredicted RBP8.35□□□□□ -1.07
LINC02541-201ENST00000427157 GPC1P35052 558 aa8.34□□□□□ -1.07
LINC02541-201ENST00000427157 ARHGEF10LQ9HCE6 1279 aa8.34□□□□□ -1.07
LINC02541-201ENST00000427157 CEP126Q9P2H0 1117 aa8.34□□□□□ -1.07
LINC02541-201ENST00000427157 CLN3Q13286 438 aa8.33□□□□□ -1.08
LINC02541-201ENST00000427157 IRF5Q13568 498 aa8.33□□□□□ -1.08
LINC02541-201ENST00000427157 CCDC85AQ96PX6 553 aaPredicted RBP8.33□□□□□ -1.08
LINC02541-201ENST00000427157 NLRP3Q96P20 1036 aa8.32□□□□□ -1.08
LINC02541-201ENST00000427157 RAB6BQ9NRW1 208 aa8.32□□□□□ -1.08
LINC02541-201ENST00000427157 SLC27A3Q5K4L6 730 aa8.31□□□□□ -1.08
LINC02541-201ENST00000427157 CDCA7Q9BWT1 371 aaPredicted RBP8.31□□□□□ -1.08
LINC02541-201ENST00000427157 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
LINC02541-201ENST00000427157 GRIP2Q9C0E4 1043 aa8.3□□□□□ -1.08
LINC02541-201ENST00000427157 ESF1Q9H501 851 aaKnown RBP8.3□□□□□ -1.08
LINC02541-201ENST00000427157 PRM3Q9NNZ6 103 aa8.3□□□□□ -1.08
LINC02541-201ENST00000427157 SLURP2P0DP57 97 aa8.29□□□□□ -1.08
LINC02541-201ENST00000427157 EIF4G2P78344 907 aaKnown RBP eCLIP8.29□□□□□ -1.08
LINC02541-201ENST00000427157 POU4F2Q12837 409 aa8.29□□□□□ -1.08
LINC02541-201ENST00000427157 ZNF385CQ66K41 422 aaPredicted RBP8.29□□□□□ -1.08
LINC02541-201ENST00000427157 ZNF837Q96EG3 531 aaPredicted RBP8.29□□□□□ -1.08
LINC02541-201ENST00000427157 GDPD2Q9HCC8 539 aa8.29□□□□□ -1.08
LINC02541-201ENST00000427157 MYCP01106 439 aaPredicted RBP8.28□□□□□ -1.08
LINC02541-201ENST00000427157 GAS6Q14393 721 aa8.28□□□□□ -1.08
LINC02541-201ENST00000427157 NBPF10Q6P3W6 841 aaKnown RBP8.28□□□□□ -1.08
LINC02541-201ENST00000427157 NBPF15Q8N660 670 aa8.28□□□□□ -1.08
LINC02541-201ENST00000427157 WHAMMQ8TF30 809 aa8.28□□□□□ -1.08
LINC02541-201ENST00000427157 DYRK1BQ9Y463 629 aa8.28□□□□□ -1.08
LINC02541-201ENST00000427157 SPATA31C2B4DYI2 1134 aa8.27□□□□□ -1.09
LINC02541-201ENST00000427157 GNRH1P01148 92 aa8.27□□□□□ -1.09
LINC02541-201ENST00000427157 IL2RAP01589 272 aa8.27□□□□□ -1.09
LINC02541-201ENST00000427157 VAC14Q08AM6 782 aa8.27□□□□□ -1.09
LINC02541-201ENST00000427157 TSGA10IPQ3SY00 556 aa8.27□□□□□ -1.09
LINC02541-201ENST00000427157 RIPOR1Q6ZS17 1223 aa8.27□□□□□ -1.09
LINC02541-201ENST00000427157 TRIM22Q8IYM9 498 aa8.27□□□□□ -1.09
LINC02541-201ENST00000427157 PHTF2Q8N3S3 785 aa8.27□□□□□ -1.09
LINC02541-201ENST00000427157 SVOPQ8N4V2 548 aa8.27□□□□□ -1.09
LINC02541-201ENST00000427157 CNKSR1Q969H4 720 aa8.27□□□□□ -1.09
LINC02541-201ENST00000427157 ABL2P42684 1182 aa8.26□□□□□ -1.09
LINC02541-201ENST00000427157 MCM6Q14566 821 aa8.26□□□□□ -1.09
LINC02541-201ENST00000427157 DBN1Q16643 649 aa8.26□□□□□ -1.09
LINC02541-201ENST00000427157 GAS2L1Q99501 681 aaPredicted RBP8.26□□□□□ -1.09
LINC02541-201ENST00000427157 ESYT1Q9BSJ8 1104 aa8.26□□□□□ -1.09
LINC02541-201ENST00000427157 DOLKQ9UPQ8 538 aa8.26□□□□□ -1.09
LINC02541-201ENST00000427157 GPR25O00155 361 aa8.25□□□□□ -1.09
LINC02541-201ENST00000427157 WASLO00401 505 aaPredicted RBP8.25□□□□□ -1.09
LINC02541-201ENST00000427157 ADAMTS2O95450 1211 aa8.25□□□□□ -1.09
LINC02541-201ENST00000427157 SLFNL1Q499Z3 407 aa8.25□□□□□ -1.09
LINC02541-201ENST00000427157 RNF135Q8IUD6 432 aa8.25□□□□□ -1.09
LINC02541-201ENST00000427157 GMCL1Q96IK5 515 aa8.25□□□□□ -1.09
LINC02541-201ENST00000427157 ADAMTS8Q9UP79 889 aa8.25□□□□□ -1.09
LINC02541-201ENST00000427157 SRSF11Q05519 484 aaKnown RBP8.24□□□□□ -1.09
LINC02541-201ENST00000427157 WDR44Q5JSH3 913 aa8.24□□□□□ -1.09
LINC02541-201ENST00000427157 TAS1R3Q7RTX0 852 aa8.24□□□□□ -1.09
LINC02541-201ENST00000427157 HRH3Q9Y5N1 445 aa8.24□□□□□ -1.09
LINC02541-201ENST00000427157 STAU1O95793 577 aaKnown RBP8.23□□□□□ -1.09
LINC02541-201ENST00000427157 GSK3AP49840 483 aa8.23□□□□□ -1.09
LINC02541-201ENST00000427157 CENPCQ03188 943 aa8.23□□□□□ -1.09
LINC02541-201ENST00000427157 OXLD1Q5BKU9 147 aa8.23□□□□□ -1.09
LINC02541-201ENST00000427157 TIMMDC1Q9NPL8 285 aa8.23□□□□□ -1.09
LINC02541-201ENST00000427157 CHIC2Q9UKJ5 165 aa8.23□□□□□ -1.09
LINC02541-201ENST00000427157 H7C1W4 665 aa8.22□□□□□ -1.09
LINC02541-201ENST00000427157 ARHGEF15O94989 841 aa8.22□□□□□ -1.09
LINC02541-201ENST00000427157 KCNMA1Q12791 1236 aa8.22□□□□□ -1.09
LINC02541-201ENST00000427157 GTPBP3Q969Y2 492 aaKnown RBP8.22□□□□□ -1.09
LINC02541-201ENST00000427157 XAGE2Q96GT9 111 aa8.22□□□□□ -1.09
LINC02541-201ENST00000427157 FHDC1Q9C0D6 1143 aaPredicted RBP8.22□□□□□ -1.09
LINC02541-201ENST00000427157 USP4Q13107 963 aa8.21□□□□□ -1.1
LINC02541-201ENST00000427157 WASHC4Q2M389 1173 aa8.21□□□□□ -1.1
LINC02541-201ENST00000427157 FOXR1Q6PIV2 292 aa8.21□□□□□ -1.1
LINC02541-201ENST00000427157 ZSCAN10Q96SZ4 725 aaPredicted RBP8.21□□□□□ -1.1
LINC02541-201ENST00000427157 ETNK1Q9HBU6 452 aa8.21□□□□□ -1.1
LINC02541-201ENST00000427157 MBIPQ9NS73 344 aa8.21□□□□□ -1.1
LINC02541-201ENST00000427157 F11P03951 625 aa8.2□□□□□ -1.1
LINC02541-201ENST00000427157 PHKA2P46019 1235 aa8.2□□□□□ -1.1
LINC02541-201ENST00000427157 ESCO1Q5FWF5 840 aa8.2□□□□□ -1.1
LINC02541-201ENST00000427157 LYPD4Q6UWN0 246 aa8.2□□□□□ -1.1
LINC02541-201ENST00000427157 THBS1P07996 1170 aa8.19□□□□□ -1.1
LINC02541-201ENST00000427157 NUCKS1Q9H1E3 243 aaKnown RBP8.19□□□□□ -1.1
LINC02541-201ENST00000427157 GPAMQ9HCL2 828 aa8.19□□□□□ -1.1
LINC02541-201ENST00000427157 IGF1RP08069 1367 aa8.19□□□□□ -1.1
LINC02541-201ENST00000427157 A0A1B0GTH6 734 aa8.18□□□□□ -1.1
LINC02541-201ENST00000427157 RNF225M0QZC1 329 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms