RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 DOT1LQ8TEK3 1739 aa30.39■■■□□ 2.46
PTCHD3P2-201ENST00000424937 EIF4A2Q14240 407 aaKnown RBP30.39■■■□□ 2.46
PTCHD3P2-201ENST00000424937 TATP17735 454 aaPredicted RBP30.37■■■□□ 2.45
PTCHD3P2-201ENST00000424937 DDX54Q8TDD1 881 aaKnown RBP30.37■■■□□ 2.45
PTCHD3P2-201ENST00000424937 NUP188Q5SRE5 1749 aa30.36■■■□□ 2.45
PTCHD3P2-201ENST00000424937 ZCRB1Q8TBF4 217 aaKnown RBP30.36■■■□□ 2.45
PTCHD3P2-201ENST00000424937 EYA1Q99502 592 aa30.36■■■□□ 2.45
PTCHD3P2-201ENST00000424937 BTAF1O14981 1849 aa30.36■■■□□ 2.45
PTCHD3P2-201ENST00000424937 EZH2Q15910 746 aaKnown RBP30.35■■■□□ 2.45
PTCHD3P2-201ENST00000424937 BCL11BQ9C0K0 894 aaPredicted RBP30.35■■■□□ 2.45
PTCHD3P2-201ENST00000424937 PTF1AQ7RTS3 328 aa30.34■■■□□ 2.45
PTCHD3P2-201ENST00000424937 PARD3Q8TEW0 1356 aa30.33■■■□□ 2.45
PTCHD3P2-201ENST00000424937 ACSBG1Q96GR2 724 aa30.33■■■□□ 2.45
PTCHD3P2-201ENST00000424937 CAMKK2Q96RR4 588 aa30.32■■■□□ 2.44
PTCHD3P2-201ENST00000424937 ZEB1P37275 1124 aaPredicted RBP30.31■■■□□ 2.44
PTCHD3P2-201ENST00000424937 IGSF1Q8N6C5 1336 aa30.29■■■□□ 2.44
PTCHD3P2-201ENST00000424937 KCNQ2O43526 872 aa30.29■■■□□ 2.44
PTCHD3P2-201ENST00000424937 PCDH11XQ9BZA7 1347 aa30.28■■■□□ 2.44
PTCHD3P2-201ENST00000424937 PCDH11YQ9BZA8 1340 aa30.28■■■□□ 2.44
PTCHD3P2-201ENST00000424937 MTHFSP49914 203 aa30.28■■■□□ 2.44
PTCHD3P2-201ENST00000424937 TOGARAM1Q9Y4F4 1720 aa30.25■■■□□ 2.43
PTCHD3P2-201ENST00000424937 ITGB4P16144 1822 aa30.22■■■□□ 2.43
PTCHD3P2-201ENST00000424937 PLSCR1O15162 318 aa30.22■■■□□ 2.43
PTCHD3P2-201ENST00000424937 IL13P35225 146 aa30.21■■■□□ 2.43
PTCHD3P2-201ENST00000424937 SYTL4Q96C24 671 aaPredicted RBP30.2■■■□□ 2.43
PTCHD3P2-201ENST00000424937 SPG7Q9UQ90 795 aa30.2■■■□□ 2.43
PTCHD3P2-201ENST00000424937 COL3A1P02461 1466 aaPredicted RBP30.19■■■□□ 2.42
PTCHD3P2-201ENST00000424937 CYP27B1O15528 508 aa30.19■■■□□ 2.42
PTCHD3P2-201ENST00000424937 AEBP1Q8IUX7 1158 aa30.18■■■□□ 2.42
PTCHD3P2-201ENST00000424937 PLEKHG2Q9H7P9 1386 aa30.17■■■□□ 2.42
PTCHD3P2-201ENST00000424937 PSDA5PKW4 1024 aaPredicted RBP30.16■■■□□ 2.42
PTCHD3P2-201ENST00000424937 PRIM1P49642 420 aaKnown RBP30.16■■■□□ 2.42
PTCHD3P2-201ENST00000424937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.16■■■□□ 2.42
PTCHD3P2-201ENST00000424937 SULT6B1Q6IMI4 303 aa30.15■■■□□ 2.42
PTCHD3P2-201ENST00000424937 KDRP35968 1356 aa30.15■■■□□ 2.42
PTCHD3P2-201ENST00000424937 DIAPH1O60610 1272 aaKnown RBP30.14■■■□□ 2.42
PTCHD3P2-201ENST00000424937 LY75O60449 1722 aa30.13■■■□□ 2.41
PTCHD3P2-201ENST00000424937 R3HDM1Q15032 1099 aaKnown RBP30.12■■■□□ 2.41
PTCHD3P2-201ENST00000424937 DDX10Q13206 875 aaKnown RBP30.11■■■□□ 2.41
PTCHD3P2-201ENST00000424937 TXNRD1Q16881 649 aa30.11■■■□□ 2.41
PTCHD3P2-201ENST00000424937 PROM2Q8N271 834 aa30.11■■■□□ 2.41
PTCHD3P2-201ENST00000424937 PPP2R1AP30153 589 aa30.1■■■□□ 2.41
PTCHD3P2-201ENST00000424937 NBPF14Q5TI25 921 aa30.1■■■□□ 2.41
PTCHD3P2-201ENST00000424937 PHKG2P15735 406 aa30.09■■■□□ 2.41
PTCHD3P2-201ENST00000424937 PLEKHO1Q53GL0 409 aaPredicted RBP30.09■■■□□ 2.41
PTCHD3P2-201ENST00000424937 IFNL2Q8IZJ0 200 aa30.09■■■□□ 2.41
PTCHD3P2-201ENST00000424937 VIRMAQ69YN4 1812 aaKnown RBP30.08■■■□□ 2.41
PTCHD3P2-201ENST00000424937 PAPPAQ13219 1627 aa30.07■■■□□ 2.4
PTCHD3P2-201ENST00000424937 HMOX1P09601 288 aa30.07■■■□□ 2.4
PTCHD3P2-201ENST00000424937 NKX1-1Q15270 411 aaPredicted RBP30.07■■■□□ 2.4
PTCHD3P2-201ENST00000424937 CFAP53Q96M91 514 aa30.07■■■□□ 2.4
PTCHD3P2-201ENST00000424937 ZNF530Q6P9A1 599 aaPredicted RBP30.06■■■□□ 2.4
PTCHD3P2-201ENST00000424937 AMOTQ4VCS5 1084 aa30.05■■■□□ 2.4
PTCHD3P2-201ENST00000424937 ANO8Q9HCE9 1232 aaPredicted RBP30.05■■■□□ 2.4
PTCHD3P2-201ENST00000424937 U2SURPO15042 1029 aaKnown RBP30.04■■■□□ 2.4
PTCHD3P2-201ENST00000424937 MPRIPQ6WCQ1 1025 aa30.04■■■□□ 2.4
PTCHD3P2-201ENST00000424937 SCN11AQ9UI33 1791 aa30.02■■■□□ 2.4
PTCHD3P2-201ENST00000424937 LRP5O75197 1615 aa30■■■□□ 2.39
PTCHD3P2-201ENST00000424937 C1orf141Q5JVX7 400 aa30■■■□□ 2.39
PTCHD3P2-201ENST00000424937 HSP90AB1P08238 724 aaKnown RBP29.99■■■□□ 2.39
PTCHD3P2-201ENST00000424937 KDM6AO15550 1401 aaPredicted RBP29.98■■■□□ 2.39
PTCHD3P2-201ENST00000424937 CASZ1Q86V15 1759 aa29.98■■■□□ 2.39
PTCHD3P2-201ENST00000424937 TAF1LQ8IZX4 1826 aa29.98■■■□□ 2.39
PTCHD3P2-201ENST00000424937 C5P01031 1676 aa29.98■■■□□ 2.39
PTCHD3P2-201ENST00000424937 TUBGCP6Q96RT7 1819 aa29.97■■■□□ 2.39
PTCHD3P2-201ENST00000424937 SLC27A3Q5K4L6 730 aa29.97■■■□□ 2.39
PTCHD3P2-201ENST00000424937 LRRC4BQ9NT99 713 aa29.97■■■□□ 2.39
PTCHD3P2-201ENST00000424937 STK32BQ9NY57 414 aa29.97■■■□□ 2.39
PTCHD3P2-201ENST00000424937 TMOD3Q9NYL9 352 aa29.97■■■□□ 2.39
PTCHD3P2-201ENST00000424937 PALLDQ8WX93 1383 aa29.96■■■□□ 2.39
PTCHD3P2-201ENST00000424937 PIGBQ92521 554 aa29.96■■■□□ 2.39
PTCHD3P2-201ENST00000424937 DCAF5Q96JK2 942 aa29.96■■■□□ 2.39
PTCHD3P2-201ENST00000424937 NUDCQ9Y266 331 aa29.95■■■□□ 2.39
PTCHD3P2-201ENST00000424937 KCNQ4P56696 695 aa29.94■■■□□ 2.38
PTCHD3P2-201ENST00000424937 CCNL1Q9UK58 526 aaPredicted RBP29.94■■■□□ 2.38
PTCHD3P2-201ENST00000424937 QSER1Q2KHR3 1735 aa29.93■■■□□ 2.38
PTCHD3P2-201ENST00000424937 RALBP1Q15311 655 aa29.92■■■□□ 2.38
PTCHD3P2-201ENST00000424937 SLC15A2Q16348 729 aa29.92■■■□□ 2.38
PTCHD3P2-201ENST00000424937 SMARCC1Q92922 1105 aaPredicted RBP29.91■■■□□ 2.38
PTCHD3P2-201ENST00000424937 ERVV-2B6SEH9 535 aa29.9■■■□□ 2.38
PTCHD3P2-201ENST00000424937 AKAP4Q5JQC9 854 aa29.9■■■□□ 2.38
PTCHD3P2-201ENST00000424937 U2AF1L5P0DN76 240 aaPredicted RBP29.89■■■□□ 2.38
PTCHD3P2-201ENST00000424937 U2AF1Q01081 240 aaKnown RBP eCLIP29.89■■■□□ 2.38
PTCHD3P2-201ENST00000424937 ZNF827Q17R98 1081 aa29.89■■■□□ 2.38
PTCHD3P2-201ENST00000424937 MTHFSDQ2M296 383 aaKnown RBP29.89■■■□□ 2.38
PTCHD3P2-201ENST00000424937 ADAMTS7Q9UKP4 1686 aa29.88■■■□□ 2.37
PTCHD3P2-201ENST00000424937 RSPH6AQ9H0K4 717 aa29.87■■■□□ 2.37
PTCHD3P2-201ENST00000424937 PRKAR2BP31323 418 aa29.86■■■□□ 2.37
PTCHD3P2-201ENST00000424937 CABP4P57796 275 aa29.86■■■□□ 2.37
PTCHD3P2-201ENST00000424937 ASAP1Q9ULH1 1129 aa29.86■■■□□ 2.37
PTCHD3P2-201ENST00000424937 SRCAPQ6ZRS2 3230 aa29.85■■■□□ 2.37
PTCHD3P2-201ENST00000424937 C4BP0C0L5 1744 aa29.85■■■□□ 2.37
PTCHD3P2-201ENST00000424937 AKT1S1Q96B36 256 aa29.84■■■□□ 2.37
PTCHD3P2-201ENST00000424937 MRC1P22897 1456 aa29.84■■■□□ 2.37
PTCHD3P2-201ENST00000424937 MYBBP1AQ9BQG0 1328 aaKnown RBP29.83■■■□□ 2.37
PTCHD3P2-201ENST00000424937 ZNF316A6NFI3 1004 aaPredicted RBP29.83■■■□□ 2.37
PTCHD3P2-201ENST00000424937 PDGFDQ9GZP0 370 aaPredicted RBP29.83■■■□□ 2.37
PTCHD3P2-201ENST00000424937 GAS2L2Q8NHY3 880 aa29.82■■■□□ 2.36
PTCHD3P2-201ENST00000424937 ATG3Q9NT62 314 aa29.82■■■□□ 2.36
PTCHD3P2-201ENST00000424937 MAP3K5Q99683 1374 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms