RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 ATP7AQ04656 1500 aa8.46□□□□□ -1.05
ALMS1-201ENST00000423048 CCDC196A0A1B0GTZ2 297 aa8.46□□□□□ -1.05
ALMS1-201ENST00000423048 YEATS2Q9ULM3 1422 aa8.46□□□□□ -1.05
ALMS1-201ENST00000423048 TTC37Q6PGP7 1564 aa8.46□□□□□ -1.05
ALMS1-201ENST00000423048 PIK3R4Q99570 1358 aa8.46□□□□□ -1.05
ALMS1-201ENST00000423048 PZPP20742 1482 aa8.46□□□□□ -1.05
ALMS1-201ENST00000423048 FAM69CQ0P6D2 419 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 STIM1Q13586 685 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 SLC4A10Q6U841 1118 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 KIF6Q6ZMV9 814 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 RNF123Q5XPI4 1314 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 POLR3GO15318 223 aaPredicted RBP8.46□□□□□ -1.06
ALMS1-201ENST00000423048 TMPOP42166 694 aaKnown RBP8.46□□□□□ -1.06
ALMS1-201ENST00000423048 CCDC158Q5M9N0 1113 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 FMNL3Q8IVF7 1028 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 CAGE1Q8TC20 777 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 CDK19Q9BWU1 502 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 REREQ9P2R6 1566 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 TRAK2O60296 914 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 ERLIN1O75477 346 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 KIF20AO95235 890 aa8.46□□□□□ -1.06
ALMS1-201ENST00000423048 RBM27Q9P2N5 1060 aaKnown RBP8.46□□□□□ -1.06
ALMS1-201ENST00000423048 U3KPZ7 1027 aaPredicted RBP8.46□□□□□ -1.06
ALMS1-201ENST00000423048 PRDM15P57071 1507 aaPredicted RBP8.45□□□□□ -1.06
ALMS1-201ENST00000423048 SYCP2Q9BX26 1530 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 KINO60870 393 aaKnown RBP8.45□□□□□ -1.06
ALMS1-201ENST00000423048 ALDH1L1O75891 902 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 TERF1P54274 439 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 CERS3Q8IU89 383 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 LRRC27Q9C0I9 530 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 HYPKQ9NX55 129 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 ABCC1P33527 1531 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 CCDC83Q8IWF9 413 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 PODXL2Q9NZ53 605 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 ARHGAP31Q2M1Z3 1444 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 CCDC57Q2TAC2 916 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 CFAP70Q5T0N1 1121 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 KDM5AP29375 1690 aaKnown RBP8.45□□□□□ -1.06
ALMS1-201ENST00000423048 C11orf95C9JLR9 678 aaPredicted RBP8.45□□□□□ -1.06
ALMS1-201ENST00000423048 RRP9O43818 475 aaKnown RBP8.45□□□□□ -1.06
ALMS1-201ENST00000423048 SMC2O95347 1197 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 FGFR1OPO95684 399 aaKnown RBP8.45□□□□□ -1.06
ALMS1-201ENST00000423048 GSDMDP57764 484 aa8.45□□□□□ -1.06
ALMS1-201ENST00000423048 LARP1Q6PKG0 1096 aaKnown RBP8.45□□□□□ -1.06
ALMS1-201ENST00000423048 IGSF3O75054 1194 aa8.44□□□□□ -1.06
ALMS1-201ENST00000423048 EIF3JO75822 258 aaKnown RBP8.44□□□□□ -1.06
ALMS1-201ENST00000423048 KANK3Q6NY19 840 aa8.44□□□□□ -1.06
ALMS1-201ENST00000423048 TRIM22Q8IYM9 498 aa8.44□□□□□ -1.06
ALMS1-201ENST00000423048 DDX19AQ9NUU7 478 aaKnown RBP8.44□□□□□ -1.06
ALMS1-201ENST00000423048 TCEAL9Q9UHQ7 104 aa8.44□□□□□ -1.06
ALMS1-201ENST00000423048 RILPL2Q969X0 211 aa8.44□□□□□ -1.06
ALMS1-201ENST00000423048 PRKAR2BP31323 418 aa8.44□□□□□ -1.06
ALMS1-201ENST00000423048 PPP1R2P41236 205 aa8.44□□□□□ -1.06
ALMS1-201ENST00000423048 PREX2Q70Z35 1606 aa8.44□□□□□ -1.06
ALMS1-201ENST00000423048 FAM193AP78312 1265 aa8.44□□□□□ -1.06
ALMS1-201ENST00000423048 DDX12PQ92771 950 aa8.44□□□□□ -1.06
ALMS1-201ENST00000423048 SSH2Q76I76 1423 aa8.43□□□□□ -1.06
ALMS1-201ENST00000423048 GNAT3A8MTJ3 354 aa8.43□□□□□ -1.06
ALMS1-201ENST00000423048 ZFYP08048 801 aaPredicted RBP8.43□□□□□ -1.06
ALMS1-201ENST00000423048 USP8P40818 1118 aa8.43□□□□□ -1.06
ALMS1-201ENST00000423048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.43□□□□□ -1.06
ALMS1-201ENST00000423048 PHF23Q9BUL5 403 aaPredicted RBP8.43□□□□□ -1.06
ALMS1-201ENST00000423048 CCDC171Q6TFL3 1326 aa8.43□□□□□ -1.06
ALMS1-201ENST00000423048 TUBB2AQ13885 445 aa8.43□□□□□ -1.06
ALMS1-201ENST00000423048 HSP90B2PQ58FF3 399 aa8.43□□□□□ -1.06
ALMS1-201ENST00000423048 BICD2Q8TD16 824 aa8.43□□□□□ -1.06
ALMS1-201ENST00000423048 TUBB2BQ9BVA1 445 aa8.43□□□□□ -1.06
ALMS1-201ENST00000423048 RARSP54136 660 aaKnown RBP8.43□□□□□ -1.06
ALMS1-201ENST00000423048 TTF1Q15361 905 aaPredicted RBP8.43□□□□□ -1.06
ALMS1-201ENST00000423048 RIC3Q7Z5B4 369 aa8.43□□□□□ -1.06
ALMS1-201ENST00000423048 RASSF8Q8NHQ8 419 aa8.43□□□□□ -1.06
ALMS1-201ENST00000423048 NOC3LQ8WTT2 800 aaKnown RBP8.43□□□□□ -1.06
ALMS1-201ENST00000423048 SAMD9LQ8IVG5 1584 aa8.43□□□□□ -1.06
ALMS1-201ENST00000423048 TNRQ92752 1358 aa8.43□□□□□ -1.06
ALMS1-201ENST00000423048 EXOSC9Q06265 439 aaKnown RBP8.42□□□□□ -1.06
ALMS1-201ENST00000423048 SLF2Q8IX21 1173 aa8.42□□□□□ -1.06
ALMS1-201ENST00000423048 PRAM1Q96QH2 718 aa8.42□□□□□ -1.06
ALMS1-201ENST00000423048 DMRT2Q9Y5R5 561 aa8.42□□□□□ -1.06
ALMS1-201ENST00000423048 A0A087WZG4 1122 aa8.42□□□□□ -1.06
ALMS1-201ENST00000423048 MCM4P33991 863 aa8.42□□□□□ -1.06
ALMS1-201ENST00000423048 CEP57L1Q8IYX8 460 aa8.42□□□□□ -1.06
ALMS1-201ENST00000423048 INTS4Q96HW7 963 aaKnown RBP8.42□□□□□ -1.06
ALMS1-201ENST00000423048 RNF41Q9H4P4 317 aaPredicted RBP8.42□□□□□ -1.06
ALMS1-201ENST00000423048 EDC4Q6P2E9 1401 aaKnown RBP8.42□□□□□ -1.06
ALMS1-201ENST00000423048 WASLO00401 505 aaPredicted RBP8.42□□□□□ -1.06
ALMS1-201ENST00000423048 TXNDC2Q86VQ3 553 aa8.42□□□□□ -1.06
ALMS1-201ENST00000423048 ZSCAN16Q9H4T2 348 aaPredicted RBP8.42□□□□□ -1.06
ALMS1-201ENST00000423048 TTC41PQ6P2S7 1318 aa8.42□□□□□ -1.06
ALMS1-201ENST00000423048 MNS1Q8NEH6 495 aa8.42□□□□□ -1.06
ALMS1-201ENST00000423048 MLH3Q9UHC1 1453 aa8.41□□□□□ -1.06
ALMS1-201ENST00000423048 ERLIN2O94905 339 aa8.41□□□□□ -1.06
ALMS1-201ENST00000423048 PRIMPOLQ96LW4 560 aa8.41□□□□□ -1.06
ALMS1-201ENST00000423048 ZSCAN12O43309 604 aa8.41□□□□□ -1.06
ALMS1-201ENST00000423048 MARCH6O60337 910 aa8.41□□□□□ -1.06
ALMS1-201ENST00000423048 BRPF1P55201 1214 aaPredicted RBP8.41□□□□□ -1.06
ALMS1-201ENST00000423048 EVA1CP58658 441 aa8.41□□□□□ -1.06
ALMS1-201ENST00000423048 MLECQ14165 292 aa8.41□□□□□ -1.06
ALMS1-201ENST00000423048 TAF7Q15545 349 aaPredicted RBP8.41□□□□□ -1.06
ALMS1-201ENST00000423048 AFAP1Q8N556 730 aa8.41□□□□□ -1.06
ALMS1-201ENST00000423048 ZNF652Q9Y2D9 606 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms