RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 PPM1GO15355 546 aaPredicted RBP30.07■■■□□ 2.4
TRAF4-204ENST00000422344 ANKRD26Q9UPS8 1709 aa30.06■■■□□ 2.4
TRAF4-204ENST00000422344 PTGER2P43116 358 aa30.06■■■□□ 2.4
TRAF4-204ENST00000422344 HSP90AB2PQ58FF8 381 aa30.06■■■□□ 2.4
TRAF4-204ENST00000422344 EMILIN1Q9Y6C2 1016 aa30.06■■■□□ 2.4
TRAF4-204ENST00000422344 NHSQ6T4R5 1651 aa30.04■■■□□ 2.4
TRAF4-204ENST00000422344 KAT6BQ8WYB5 2073 aa30.03■■■□□ 2.4
TRAF4-204ENST00000422344 NSD2O96028 1365 aa30.03■■■□□ 2.4
TRAF4-204ENST00000422344 RGPD2P0DJD1 1756 aa30.03■■■□□ 2.4
TRAF4-204ENST00000422344 KNSTRNQ9Y448 316 aa30.03■■■□□ 2.4
TRAF4-204ENST00000422344 TNNT2P45379 298 aaPredicted RBP30.02■■■□□ 2.4
TRAF4-204ENST00000422344 NBPF6Q5VWK0 638 aa30.01■■■□□ 2.39
TRAF4-204ENST00000422344 NBPF4Q96M43 638 aa30.01■■■□□ 2.39
TRAF4-204ENST00000422344 USHBP1Q8N6Y0 703 aa29.99■■■□□ 2.39
TRAF4-204ENST00000422344 DDX54Q8TDD1 881 aaKnown RBP29.98■■■□□ 2.39
TRAF4-204ENST00000422344 RAPGEF4Q8WZA2 1011 aa29.98■■■□□ 2.39
TRAF4-204ENST00000422344 MTFR1LQ9H019 292 aa29.98■■■□□ 2.39
TRAF4-204ENST00000422344 MAP2P11137 1827 aaKnown RBP29.98■■■□□ 2.39
TRAF4-204ENST00000422344 POLKQ9UBT6 870 aa29.97■■■□□ 2.39
TRAF4-204ENST00000422344 WASHC2AQ641Q2 1341 aa29.96■■■□□ 2.39
TRAF4-204ENST00000422344 MORC1Q86VD1 984 aa29.96■■■□□ 2.39
TRAF4-204ENST00000422344 FHDC1Q9C0D6 1143 aaPredicted RBP29.96■■■□□ 2.39
TRAF4-204ENST00000422344 BTAF1O14981 1849 aa29.96■■■□□ 2.39
TRAF4-204ENST00000422344 MEGF6O75095 1541 aa29.96■■■□□ 2.39
TRAF4-204ENST00000422344 ZCRB1Q8TBF4 217 aaKnown RBP29.95■■■□□ 2.39
TRAF4-204ENST00000422344 SYT17Q9BSW7 474 aa29.95■■■□□ 2.39
TRAF4-204ENST00000422344 TATP17735 454 aaPredicted RBP29.93■■■□□ 2.38
TRAF4-204ENST00000422344 SGIP1Q9BQI5 828 aa29.92■■■□□ 2.38
TRAF4-204ENST00000422344 PAPPAQ13219 1627 aa29.91■■■□□ 2.38
TRAF4-204ENST00000422344 UTRNP46939 3433 aa29.9■■■□□ 2.38
TRAF4-204ENST00000422344 ZNF827Q17R98 1081 aa29.89■■■□□ 2.38
TRAF4-204ENST00000422344 LRRC4BQ9NT99 713 aa29.88■■■□□ 2.37
TRAF4-204ENST00000422344 ARXQ96QS3 562 aa29.87■■■□□ 2.37
TRAF4-204ENST00000422344 AMER1Q5JTC6 1135 aaPredicted RBP29.85■■■□□ 2.37
TRAF4-204ENST00000422344 SHANK3Q9BYB0 1731 aa29.85■■■□□ 2.37
TRAF4-204ENST00000422344 EYA1Q99502 592 aa29.84■■■□□ 2.37
TRAF4-204ENST00000422344 PCDH11XQ9BZA7 1347 aa29.83■■■□□ 2.37
TRAF4-204ENST00000422344 PCDH11YQ9BZA8 1340 aa29.83■■■□□ 2.37
TRAF4-204ENST00000422344 EIF4A2Q14240 407 aaKnown RBP29.83■■■□□ 2.37
TRAF4-204ENST00000422344 ZNF784Q8NCA9 323 aaPredicted RBP29.82■■■□□ 2.36
TRAF4-204ENST00000422344 SYTL4Q96C24 671 aaPredicted RBP29.82■■■□□ 2.36
TRAF4-204ENST00000422344 NCAPD2Q15021 1401 aa29.81■■■□□ 2.36
TRAF4-204ENST00000422344 AKT1S1Q96B36 256 aa29.8■■■□□ 2.36
TRAF4-204ENST00000422344 DOT1LQ8TEK3 1739 aa29.79■■■□□ 2.36
TRAF4-204ENST00000422344 PER1O15534 1290 aaPredicted RBP29.79■■■□□ 2.36
TRAF4-204ENST00000422344 SLC27A3Q5K4L6 730 aa29.79■■■□□ 2.36
TRAF4-204ENST00000422344 CHD4Q14839 1912 aa29.79■■■□□ 2.36
TRAF4-204ENST00000422344 PRIM1P49642 420 aaKnown RBP29.78■■■□□ 2.36
TRAF4-204ENST00000422344 CC2D1BQ5T0F9 858 aaKnown RBP29.78■■■□□ 2.36
TRAF4-204ENST00000422344 KCNQ4P56696 695 aa29.77■■■□□ 2.36
TRAF4-204ENST00000422344 SPG7Q9UQ90 795 aa29.77■■■□□ 2.36
TRAF4-204ENST00000422344 MAP3K5Q99683 1374 aa29.76■■■□□ 2.35
TRAF4-204ENST00000422344 PKD1L3Q7Z443 1732 aa29.75■■■□□ 2.35
TRAF4-204ENST00000422344 SLC16A10Q8TF71 515 aa29.75■■■□□ 2.35
TRAF4-204ENST00000422344 QSER1Q2KHR3 1735 aa29.74■■■□□ 2.35
TRAF4-204ENST00000422344 KLHL34Q8N239 644 aa29.73■■■□□ 2.35
TRAF4-204ENST00000422344 TFCP2L1Q9NZI6 479 aa29.73■■■□□ 2.35
TRAF4-204ENST00000422344 PNPLA7Q6ZV29 1317 aa29.72■■■□□ 2.35
TRAF4-204ENST00000422344 IGSF1Q8N6C5 1336 aa29.72■■■□□ 2.35
TRAF4-204ENST00000422344 CNGB1Q14028 1251 aaPredicted RBP29.72■■■□□ 2.35
TRAF4-204ENST00000422344 CYP27B1O15528 508 aa29.71■■■□□ 2.35
TRAF4-204ENST00000422344 POLD1P28340 1107 aa29.71■■■□□ 2.35
TRAF4-204ENST00000422344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.71■■■□□ 2.353e-6■□□□□ 10.9
TRAF4-204ENST00000422344 NPC1L1Q9UHC9 1359 aa29.71■■■□□ 2.35
TRAF4-204ENST00000422344 GPR162Q16538 588 aa29.7■■■□□ 2.35
TRAF4-204ENST00000422344 TUBGCP6Q96RT7 1819 aa29.7■■■□□ 2.34
TRAF4-204ENST00000422344 MTHFSP49914 203 aa29.68■■■□□ 2.34
TRAF4-204ENST00000422344 LY75O60449 1722 aa29.68■■■□□ 2.34
TRAF4-204ENST00000422344 PLEKHG2Q9H7P9 1386 aa29.67■■■□□ 2.34
TRAF4-204ENST00000422344 COL24A1Q17RW2 1714 aa29.65■■■□□ 2.34
TRAF4-204ENST00000422344 CCNL1Q9UK58 526 aaPredicted RBP29.65■■■□□ 2.34
TRAF4-204ENST00000422344 IFNL2Q8IZJ0 200 aa29.64■■■□□ 2.34
TRAF4-204ENST00000422344 PELP1Q8IZL8 1130 aaKnown RBP29.64■■■□□ 2.34
TRAF4-204ENST00000422344 IL13P35225 146 aa29.63■■■□□ 2.33
TRAF4-204ENST00000422344 MPRIPQ6WCQ1 1025 aa29.63■■■□□ 2.33
TRAF4-204ENST00000422344 NKX1-1Q15270 411 aaPredicted RBP29.62■■■□□ 2.33
TRAF4-204ENST00000422344 PLEKHO1Q53GL0 409 aaPredicted RBP29.62■■■□□ 2.33
TRAF4-204ENST00000422344 GOLGB1Q14789 3259 aaKnown RBP29.62■■■□□ 2.33
TRAF4-204ENST00000422344 PHKG2P15735 406 aa29.61■■■□□ 2.33
TRAF4-204ENST00000422344 SULT6B1Q6IMI4 303 aa29.61■■■□□ 2.33
TRAF4-204ENST00000422344 MSH5O43196 834 aa29.6■■■□□ 2.33
TRAF4-204ENST00000422344 AEBP1Q8IUX7 1158 aa29.6■■■□□ 2.33
TRAF4-204ENST00000422344 TOGARAM1Q9Y4F4 1720 aa29.59■■■□□ 2.33
TRAF4-204ENST00000422344 AMOTQ4VCS5 1084 aa29.59■■■□□ 2.33
TRAF4-204ENST00000422344 NLGN2Q8NFZ4 835 aa29.59■■■□□ 2.33
TRAF4-204ENST00000422344 DIAPH1O60610 1272 aaKnown RBP29.57■■■□□ 2.32
TRAF4-204ENST00000422344 ZNF530Q6P9A1 599 aaPredicted RBP29.56■■■□□ 2.32
TRAF4-204ENST00000422344 COL23A1Q86Y22 540 aaPredicted RBP29.56■■■□□ 2.32
TRAF4-204ENST00000422344 KDRP35968 1356 aa29.55■■■□□ 2.32
TRAF4-204ENST00000422344 ITGB4P16144 1822 aa29.55■■■□□ 2.32
TRAF4-204ENST00000422344 HSP90AB1P08238 724 aaKnown RBP29.55■■■□□ 2.32
TRAF4-204ENST00000422344 C1QTNF8P60827 252 aa29.55■■■□□ 2.32
TRAF4-204ENST00000422344 TMOD3Q9NYL9 352 aa29.55■■■□□ 2.32
TRAF4-204ENST00000422344 PALLDQ8WX93 1383 aa29.54■■■□□ 2.32
TRAF4-204ENST00000422344 SMARCC1Q92922 1105 aaPredicted RBP29.54■■■□□ 2.32
TRAF4-204ENST00000422344 SENP3-EIF4A1A0A087X0R7 540 aa29.53■■■□□ 2.32
TRAF4-204ENST00000422344 PIGBQ92521 554 aa29.53■■■□□ 2.32
TRAF4-204ENST00000422344 C1orf141Q5JVX7 400 aa29.52■■■□□ 2.32
TRAF4-204ENST00000422344 MSL1Q68DK7 614 aa29.52■■■□□ 2.32
TRAF4-204ENST00000422344 HMGB2P26583 209 aaKnown RBP29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms