RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 KAT6BQ8WYB5 2073 aa35.18■■■■□ 3.22
SMDT1-202ENST00000422252 SHANK3Q9BYB0 1731 aa35.18■■■■□ 3.22
SMDT1-202ENST00000422252 STK32BQ9NY57 414 aa35.18■■■■□ 3.22
SMDT1-202ENST00000422252 PPM1GO15355 546 aaPredicted RBP35.17■■■■□ 3.22
SMDT1-202ENST00000422252 SPON1Q9HCB6 807 aa35.17■■■■□ 3.22
SMDT1-202ENST00000422252 TATP17735 454 aaPredicted RBP35.16■■■■□ 3.22
SMDT1-202ENST00000422252 PANK3Q9H999 370 aa35.16■■■■□ 3.22
SMDT1-202ENST00000422252 ANKRD26Q9UPS8 1709 aa35.15■■■■□ 3.22
SMDT1-202ENST00000422252 SLC15A2Q16348 729 aa35.14■■■■□ 3.22
SMDT1-202ENST00000422252 WASHC2AQ641Q2 1341 aa35.13■■■■□ 3.21
SMDT1-202ENST00000422252 SYTL4Q96C24 671 aaPredicted RBP35.13■■■■□ 3.21
SMDT1-202ENST00000422252 CASZ1Q86V15 1759 aa35.13■■■■□ 3.21
SMDT1-202ENST00000422252 PRIM1P49642 420 aaKnown RBP35.12■■■■□ 3.21
SMDT1-202ENST00000422252 POLKQ9UBT6 870 aa35.11■■■■□ 3.21
SMDT1-202ENST00000422252 DOT1LQ8TEK3 1739 aa35.11■■■■□ 3.21
SMDT1-202ENST00000422252 MAP2P11137 1827 aaKnown RBP35.11■■■■□ 3.21
SMDT1-202ENST00000422252 PDGFDQ9GZP0 370 aaPredicted RBP35.09■■■■□ 3.21
SMDT1-202ENST00000422252 TNNT2P45379 298 aaPredicted RBP35.08■■■■□ 3.21
SMDT1-202ENST00000422252 PCDH11XQ9BZA7 1347 aa35.07■■■■□ 3.21
SMDT1-202ENST00000422252 PCDH11YQ9BZA8 1340 aa35.07■■■■□ 3.21
SMDT1-202ENST00000422252 PAPPAQ13219 1627 aa35.07■■■■□ 3.21
SMDT1-202ENST00000422252 NCAPD2Q15021 1401 aa35.06■■■■□ 3.2
SMDT1-202ENST00000422252 NSD2O96028 1365 aa35.06■■■■□ 3.2
SMDT1-202ENST00000422252 LRRC4BQ9NT99 713 aa35.06■■■■□ 3.2
SMDT1-202ENST00000422252 PPP1R1BQ9UD71 204 aaPredicted RBP35.06■■■■□ 3.2
SMDT1-202ENST00000422252 SLC27A3Q5K4L6 730 aa35.04■■■■□ 3.2
SMDT1-202ENST00000422252 ZBTB7AO95365 584 aa35.02■■■■□ 3.2
SMDT1-202ENST00000422252 EYA1Q99502 592 aa35.01■■■■□ 3.2
SMDT1-202ENST00000422252 ZNF827Q17R98 1081 aa34.99■■■■□ 3.19
SMDT1-202ENST00000422252 CYP27B1O15528 508 aa34.98■■■■□ 3.19
SMDT1-202ENST00000422252 PKD1L3Q7Z443 1732 aa34.98■■■■□ 3.19
SMDT1-202ENST00000422252 EIF4A2Q14240 407 aaKnown RBP34.97■■■■□ 3.19
SMDT1-202ENST00000422252 KNSTRNQ9Y448 316 aa34.97■■■■□ 3.19
SMDT1-202ENST00000422252 KIF7Q2M1P5 1343 aa34.96■■■■□ 3.19
SMDT1-202ENST00000422252 LY75O60449 1722 aa34.95■■■■□ 3.19
SMDT1-202ENST00000422252 AKT1S1Q96B36 256 aa34.95■■■■□ 3.19
SMDT1-202ENST00000422252 SPG7Q9UQ90 795 aa34.95■■■■□ 3.19
SMDT1-202ENST00000422252 ATF5Q9Y2D1 282 aaPredicted RBP34.95■■■■□ 3.19
SMDT1-202ENST00000422252 MORC1Q86VD1 984 aa34.94■■■■□ 3.18
SMDT1-202ENST00000422252 MTFR1LQ9H019 292 aa34.94■■■■□ 3.18
SMDT1-202ENST00000422252 PTGER2P43116 358 aa34.93■■■■□ 3.18
SMDT1-202ENST00000422252 KCNQ4P56696 695 aa34.93■■■■□ 3.18
SMDT1-202ENST00000422252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.91■■■■□ 3.18
SMDT1-202ENST00000422252 CCNL1Q9UK58 526 aaPredicted RBP34.9■■■■□ 3.18
SMDT1-202ENST00000422252 NKX1-1Q15270 411 aaPredicted RBP34.88■■■■□ 3.17
SMDT1-202ENST00000422252 MPRIPQ6WCQ1 1025 aa34.88■■■■□ 3.17
SMDT1-202ENST00000422252 TOGARAM1Q9Y4F4 1720 aa34.86■■■■□ 3.17
SMDT1-202ENST00000422252 IGSF1Q8N6C5 1336 aa34.86■■■■□ 3.17
SMDT1-202ENST00000422252 AMER1Q5JTC6 1135 aaPredicted RBP34.85■■■■□ 3.17
SMDT1-202ENST00000422252 TFCP2L1Q9NZI6 479 aa34.85■■■■□ 3.17
SMDT1-202ENST00000422252 PLEKHG2Q9H7P9 1386 aa34.85■■■■□ 3.17
SMDT1-202ENST00000422252 QSER1Q2KHR3 1735 aa34.84■■■■□ 3.17
SMDT1-202ENST00000422252 SGIP1Q9BQI5 828 aa34.84■■■■□ 3.17
SMDT1-202ENST00000422252 PNPLA7Q6ZV29 1317 aa34.82■■■■□ 3.17
SMDT1-202ENST00000422252 IFNL2Q8IZJ0 200 aa34.82■■■■□ 3.16
SMDT1-202ENST00000422252 PALLDQ8WX93 1383 aa34.82■■■■□ 3.16
SMDT1-202ENST00000422252 ITGB4P16144 1822 aa34.81■■■■□ 3.16
SMDT1-202ENST00000422252 PHKG2P15735 406 aa34.8■■■■□ 3.16
SMDT1-202ENST00000422252 SLC16A10Q8TF71 515 aa34.8■■■■□ 3.16
SMDT1-202ENST00000422252 SMARCC1Q92922 1105 aaPredicted RBP34.79■■■■□ 3.16
SMDT1-202ENST00000422252 PIGBQ92521 554 aa34.78■■■■□ 3.16
SMDT1-202ENST00000422252 TUBGCP6Q96RT7 1819 aa34.78■■■■□ 3.16
SMDT1-202ENST00000422252 HMGB2P26583 209 aaKnown RBP34.77■■■■□ 3.16
SMDT1-202ENST00000422252 PER1O15534 1290 aaPredicted RBP34.76■■■■□ 3.16
SMDT1-202ENST00000422252 DCAF8L1A6NGE4 600 aa34.74■■■■□ 3.15
SMDT1-202ENST00000422252 ARXQ96QS3 562 aa34.74■■■■□ 3.15
SMDT1-202ENST00000422252 FHDC1Q9C0D6 1143 aaPredicted RBP34.74■■■■□ 3.15
SMDT1-202ENST00000422252 TMOD3Q9NYL9 352 aa34.74■■■■□ 3.15
SMDT1-202ENST00000422252 C5P01031 1676 aa34.73■■■■□ 3.15
SMDT1-202ENST00000422252 PLEKHO1Q53GL0 409 aaPredicted RBP34.72■■■■□ 3.15
SMDT1-202ENST00000422252 SYT17Q9BSW7 474 aa34.71■■■■□ 3.15
SMDT1-202ENST00000422252 AEBP1Q8IUX7 1158 aa34.7■■■■□ 3.15
SMDT1-202ENST00000422252 IL13P35225 146 aa34.69■■■■□ 3.14
SMDT1-202ENST00000422252 AMOTQ4VCS5 1084 aa34.69■■■■□ 3.14
SMDT1-202ENST00000422252 POLD1P28340 1107 aa34.68■■■■□ 3.14
SMDT1-202ENST00000422252 CC2D1BQ5T0F9 858 aaKnown RBP34.68■■■■□ 3.14
SMDT1-202ENST00000422252 TAF1LQ8IZX4 1826 aa34.68■■■■□ 3.14
SMDT1-202ENST00000422252 MSH5O43196 834 aa34.66■■■■□ 3.14
SMDT1-202ENST00000422252 HSP90AB1P08238 724 aaKnown RBP34.66■■■■□ 3.14
SMDT1-202ENST00000422252 MTHFSP49914 203 aa34.66■■■■□ 3.14
SMDT1-202ENST00000422252 SULT6B1Q6IMI4 303 aa34.66■■■■□ 3.14
SMDT1-202ENST00000422252 COL23A1Q86Y22 540 aaPredicted RBP34.66■■■■□ 3.14
SMDT1-202ENST00000422252 COL24A1Q17RW2 1714 aa34.66■■■■□ 3.14
SMDT1-202ENST00000422252 ZNF530Q6P9A1 599 aaPredicted RBP34.65■■■■□ 3.14
SMDT1-202ENST00000422252 DCAF5Q96JK2 942 aa34.65■■■■□ 3.14
SMDT1-202ENST00000422252 ASAP1Q9ULH1 1129 aa34.65■■■■□ 3.14
SMDT1-202ENST00000422252 KDRP35968 1356 aa34.64■■■■□ 3.14
SMDT1-202ENST00000422252 MAP3K5Q99683 1374 aa34.64■■■■□ 3.14
SMDT1-202ENST00000422252 LOC102724428A0A0B4J2F2 783 aa34.64■■■■□ 3.14
SMDT1-202ENST00000422252 SIK1P57059 783 aa34.64■■■■□ 3.14
SMDT1-202ENST00000422252 ERVV-2B6SEH9 535 aa34.63■■■■□ 3.13
SMDT1-202ENST00000422252 C4BP0C0L5 1744 aa34.63■■■■□ 3.13
SMDT1-202ENST00000422252 FLAD1Q8NFF5 587 aa34.62■■■■□ 3.13
SMDT1-202ENST00000422252 NPC1L1Q9UHC9 1359 aa34.62■■■■□ 3.13
SMDT1-202ENST00000422252 AK7Q96M32 723 aa34.61■■■■□ 3.13
SMDT1-202ENST00000422252 ATG3Q9NT62 314 aa34.6■■■■□ 3.13
SMDT1-202ENST00000422252 C1orf141Q5JVX7 400 aa34.59■■■■□ 3.13
SMDT1-202ENST00000422252 KDM6AO15550 1401 aaPredicted RBP34.58■■■■□ 3.13
SMDT1-202ENST00000422252 LINC00116Q8NCU8 138 aa34.57■■■■□ 3.12
SMDT1-202ENST00000422252 ATP6V1AP38606 617 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 467.4 ms