RNA–Protein interactions for RNA: ENST00000420568.5

SLC13A3-206, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 1,256 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-206ENST00000420568 WASHC2AQ641Q2 1341 aa22.34■■□□□ 1.17
SLC13A3-206ENST00000420568 NHSQ6T4R5 1651 aa22.34■■□□□ 1.17
SLC13A3-206ENST00000420568 TATP17735 454 aaPredicted RBP22.34■■□□□ 1.17
SLC13A3-206ENST00000420568 PPM1GO15355 546 aaPredicted RBP22.33■■□□□ 1.17
SLC13A3-206ENST00000420568 PRIM1P49642 420 aaKnown RBP22.33■■□□□ 1.17
SLC13A3-206ENST00000420568 PDGFDQ9GZP0 370 aaPredicted RBP22.33■■□□□ 1.17
SLC13A3-206ENST00000420568 POLKQ9UBT6 870 aa22.33■■□□□ 1.17
SLC13A3-206ENST00000420568 KIF20BQ96Q89 1820 aa22.31■■□□□ 1.16
SLC13A3-206ENST00000420568 LRRC4BQ9NT99 713 aa22.31■■□□□ 1.16
SLC13A3-206ENST00000420568 SYTL4Q96C24 671 aaPredicted RBP22.3■■□□□ 1.16
SLC13A3-206ENST00000420568 SLC27A3Q5K4L6 730 aa22.29■■□□□ 1.16
SLC13A3-206ENST00000420568 NSD2O96028 1365 aa22.27■■□□□ 1.16
SLC13A3-206ENST00000420568 RGPD2P0DJD1 1756 aa22.27■■□□□ 1.16
SLC13A3-206ENST00000420568 ZBTB7AO95365 584 aa22.26■■□□□ 1.15
SLC13A3-206ENST00000420568 TNNT2P45379 298 aaPredicted RBP22.26■■□□□ 1.15
SLC13A3-206ENST00000420568 EYA1Q99502 592 aa22.26■■□□□ 1.15
SLC13A3-206ENST00000420568 PPP1R1BQ9UD71 204 aaPredicted RBP22.26■■□□□ 1.15
SLC13A3-206ENST00000420568 PCDH11XQ9BZA7 1347 aa22.26■■□□□ 1.15
SLC13A3-206ENST00000420568 PCDH11YQ9BZA8 1340 aa22.26■■□□□ 1.15
SLC13A3-206ENST00000420568 NCAPD2Q15021 1401 aa22.25■■□□□ 1.15
SLC13A3-206ENST00000420568 CYP27B1O15528 508 aa22.25■■□□□ 1.15
SLC13A3-206ENST00000420568 PTGER2P43116 358 aa22.24■■□□□ 1.15
SLC13A3-206ENST00000420568 ZNF827Q17R98 1081 aa22.24■■□□□ 1.15
SLC13A3-206ENST00000420568 AKT1S1Q96B36 256 aa22.24■■□□□ 1.15
SLC13A3-206ENST00000420568 BTAF1O14981 1849 aa22.23■■□□□ 1.15
SLC13A3-206ENST00000420568 EIF4A2Q14240 407 aaKnown RBP22.22■■□□□ 1.15
SLC13A3-206ENST00000420568 MTFR1LQ9H019 292 aa22.22■■□□□ 1.15
SLC13A3-206ENST00000420568 ATF5Q9Y2D1 282 aaPredicted RBP22.22■■□□□ 1.15
SLC13A3-206ENST00000420568 CASZ1Q86V15 1759 aa22.22■■□□□ 1.15
SLC13A3-206ENST00000420568 NKX1-1Q15270 411 aaPredicted RBP22.21■■□□□ 1.15
SLC13A3-206ENST00000420568 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.21■■□□□ 1.151e-9■□□□□ 8.3
SLC13A3-206ENST00000420568 SPG7Q9UQ90 795 aa22.21■■□□□ 1.15
SLC13A3-206ENST00000420568 SHANK3Q9BYB0 1731 aa22.2■■□□□ 1.14
SLC13A3-206ENST00000420568 KCNQ4P56696 695 aa22.2■■□□□ 1.14
SLC13A3-206ENST00000420568 MORC1Q86VD1 984 aa22.2■■□□□ 1.14
SLC13A3-206ENST00000420568 KNSTRNQ9Y448 316 aa22.2■■□□□ 1.14
SLC13A3-206ENST00000420568 KIF7Q2M1P5 1343 aa22.2■■□□□ 1.14
SLC13A3-206ENST00000420568 PAPPAQ13219 1627 aa22.2■■□□□ 1.14
SLC13A3-206ENST00000420568 ANKRD26Q9UPS8 1709 aa22.18■■□□□ 1.14
SLC13A3-206ENST00000420568 SGIP1Q9BQI5 828 aa22.18■■□□□ 1.14
SLC13A3-206ENST00000420568 CCNL1Q9UK58 526 aaPredicted RBP22.18■■□□□ 1.14
SLC13A3-206ENST00000420568 AMER1Q5JTC6 1135 aaPredicted RBP22.16■■□□□ 1.14
SLC13A3-206ENST00000420568 MPRIPQ6WCQ1 1025 aa22.16■■□□□ 1.14
SLC13A3-206ENST00000420568 IGSF1Q8N6C5 1336 aa22.15■■□□□ 1.14
SLC13A3-206ENST00000420568 SLC16A10Q8TF71 515 aa22.15■■□□□ 1.14
SLC13A3-206ENST00000420568 TFCP2L1Q9NZI6 479 aa22.15■■□□□ 1.14
SLC13A3-206ENST00000420568 DOT1LQ8TEK3 1739 aa22.14■■□□□ 1.14
SLC13A3-206ENST00000420568 PNPLA7Q6ZV29 1317 aa22.14■■□□□ 1.14
SLC13A3-206ENST00000420568 KAT6BQ8WYB5 2073 aa22.13■■□□□ 1.13
SLC13A3-206ENST00000420568 MAP2P11137 1827 aaKnown RBP22.13■■□□□ 1.13
SLC13A3-206ENST00000420568 PER1O15534 1290 aaPredicted RBP22.13■■□□□ 1.13
SLC13A3-206ENST00000420568 PHKG2P15735 406 aa22.13■■□□□ 1.13
SLC13A3-206ENST00000420568 IFNL2Q8IZJ0 200 aa22.13■■□□□ 1.13
SLC13A3-206ENST00000420568 PIGBQ92521 554 aa22.13■■□□□ 1.13
SLC13A3-206ENST00000420568 PLEKHG2Q9H7P9 1386 aa22.12■■□□□ 1.13
SLC13A3-206ENST00000420568 SMARCC1Q92922 1105 aaPredicted RBP22.12■■□□□ 1.13
SLC13A3-206ENST00000420568 HMGB2P26583 209 aaKnown RBP22.11■■□□□ 1.13
SLC13A3-206ENST00000420568 PALLDQ8WX93 1383 aa22.11■■□□□ 1.13
SLC13A3-206ENST00000420568 ARXQ96QS3 562 aa22.1■■□□□ 1.13
SLC13A3-206ENST00000420568 SYT17Q9BSW7 474 aa22.09■■□□□ 1.13
SLC13A3-206ENST00000420568 FHDC1Q9C0D6 1143 aaPredicted RBP22.09■■□□□ 1.13
SLC13A3-206ENST00000420568 PKD1L3Q7Z443 1732 aa22.09■■□□□ 1.13
SLC13A3-206ENST00000420568 LY75O60449 1722 aa22.08■■□□□ 1.12
SLC13A3-206ENST00000420568 DCAF8L1A6NGE4 600 aa22.07■■□□□ 1.12
SLC13A3-206ENST00000420568 IL13P35225 146 aa22.07■■□□□ 1.12
SLC13A3-206ENST00000420568 PLEKHO1Q53GL0 409 aaPredicted RBP22.07■■□□□ 1.12
SLC13A3-206ENST00000420568 COL23A1Q86Y22 540 aaPredicted RBP22.06■■□□□ 1.12
SLC13A3-206ENST00000420568 TMOD3Q9NYL9 352 aa22.06■■□□□ 1.12
SLC13A3-206ENST00000420568 AMOTQ4VCS5 1084 aa22.05■■□□□ 1.12
SLC13A3-206ENST00000420568 AEBP1Q8IUX7 1158 aa22.04■■□□□ 1.12
SLC13A3-206ENST00000420568 ERVV-2B6SEH9 535 aa22.03■■□□□ 1.12
SLC13A3-206ENST00000420568 HSP90AB1P08238 724 aaKnown RBP22.03■■□□□ 1.12
SLC13A3-206ENST00000420568 POLD1P28340 1107 aa22.03■■□□□ 1.12
SLC13A3-206ENST00000420568 MTHFSP49914 203 aa22.03■■□□□ 1.12
SLC13A3-206ENST00000420568 SULT6B1Q6IMI4 303 aa22.03■■□□□ 1.12
SLC13A3-206ENST00000420568 DCAF5Q96JK2 942 aa22.03■■□□□ 1.12
SLC13A3-206ENST00000420568 ASAP1Q9ULH1 1129 aa22.03■■□□□ 1.12
SLC13A3-206ENST00000420568 LOC102724428A0A0B4J2F2 783 aa22.02■■□□□ 1.12
SLC13A3-206ENST00000420568 SIK1P57059 783 aa22.02■■□□□ 1.12
SLC13A3-206ENST00000420568 FLAD1Q8NFF5 587 aa22.02■■□□□ 1.12
SLC13A3-206ENST00000420568 ATG3Q9NT62 314 aa22.02■■□□□ 1.12
SLC13A3-206ENST00000420568 TOGARAM1Q9Y4F4 1720 aa22.02■■□□□ 1.12
SLC13A3-206ENST00000420568 MAP3K5Q99683 1374 aa22.01■■□□□ 1.11
SLC13A3-206ENST00000420568 CC2D1BQ5T0F9 858 aaKnown RBP22.01■■□□□ 1.11
SLC13A3-206ENST00000420568 KDRP35968 1356 aa22■■□□□ 1.11
SLC13A3-206ENST00000420568 MSH5O43196 834 aa22■■□□□ 1.11
SLC13A3-206ENST00000420568 ZNF530Q6P9A1 599 aaPredicted RBP22■■□□□ 1.11
SLC13A3-206ENST00000420568 QSER1Q2KHR3 1735 aa22■■□□□ 1.11
SLC13A3-206ENST00000420568 NPC1L1Q9UHC9 1359 aa21.99■■□□□ 1.11
SLC13A3-206ENST00000420568 AK7Q96M32 723 aa21.98■■□□□ 1.11
SLC13A3-206ENST00000420568 LINC00116Q8NCU8 138 aa21.97■■□□□ 1.11
SLC13A3-206ENST00000420568 YY1P25490 414 aa21.96■■□□□ 1.11
SLC13A3-206ENST00000420568 ATP6V1AP38606 617 aa21.96■■□□□ 1.11
SLC13A3-206ENST00000420568 ITPK1Q13572 414 aa21.96■■□□□ 1.11
SLC13A3-206ENST00000420568 C1orf141Q5JVX7 400 aa21.96■■□□□ 1.11
SLC13A3-206ENST00000420568 AMIGO3Q86WK7 504 aa21.96■■□□□ 1.11
SLC13A3-206ENST00000420568 ITGB4P16144 1822 aa21.95■■□□□ 1.1
SLC13A3-206ENST00000420568 DIAPH1O60610 1272 aaKnown RBP21.94■■□□□ 1.1
SLC13A3-206ENST00000420568 CABP4P57796 275 aa21.94■■□□□ 1.1
SLC13A3-206ENST00000420568 KDM6AO15550 1401 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms