RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RSPH6AQ9H0K4 717 aa10.23□□□□□ -0.77
HMGN1-205ENST00000419378 TMEM94Q12767 1356 aa10.23□□□□□ -0.77
HMGN1-205ENST00000419378 TOM1O60784 492 aa10.22□□□□□ -0.77
HMGN1-205ENST00000419378 PCMTD1Q96MG8 357 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-205ENST00000419378 VPS9D1Q9Y2B5 631 aa10.22□□□□□ -0.77
HMGN1-205ENST00000419378 PIK3R4Q99570 1358 aa10.22□□□□□ -0.77
HMGN1-205ENST00000419378 PPLO60437 1756 aa10.21□□□□□ -0.77
HMGN1-205ENST00000419378 CD46P15529 392 aa10.21□□□□□ -0.77
HMGN1-205ENST00000419378 SULF1Q8IWU6 871 aa10.21□□□□□ -0.77
HMGN1-205ENST00000419378 SPATA31E1Q6ZUB1 1445 aa10.21□□□□□ -0.78
HMGN1-205ENST00000419378 PIP4K2BP78356 416 aa10.2□□□□□ -0.78
HMGN1-205ENST00000419378 SKIV2LQ15477 1246 aaKnown RBP10.2□□□□□ -0.78
HMGN1-205ENST00000419378 RPGRIP1LQ68CZ1 1315 aa10.2□□□□□ -0.78
HMGN1-205ENST00000419378 PROSER2Q86WR7 435 aaPredicted RBP10.2□□□□□ -0.78
HMGN1-205ENST00000419378 XRN1Q8IZH2 1706 aaKnown RBP10.2□□□□□ -0.78
HMGN1-205ENST00000419378 TBC1D2Q9BYX2 928 aa10.2□□□□□ -0.78
HMGN1-205ENST00000419378 POLR3EQ9NVU0 708 aa10.2□□□□□ -0.78
HMGN1-205ENST00000419378 IFT172Q9UG01 1749 aa10.2□□□□□ -0.78
HMGN1-205ENST00000419378 SETD1AO15047 1707 aaKnown RBP10.19□□□□□ -0.78
HMGN1-205ENST00000419378 PTPRUQ92729 1446 aa10.19□□□□□ -0.78
HMGN1-205ENST00000419378 MYSM1Q5VVJ2 828 aa10.19□□□□□ -0.78
HMGN1-205ENST00000419378 METP08581 1390 aa10.18□□□□□ -0.78
HMGN1-205ENST00000419378 HRCP23327 699 aa10.18□□□□□ -0.78
HMGN1-205ENST00000419378 SWT1Q5T5J6 900 aaKnown RBP10.18□□□□□ -0.78
HMGN1-205ENST00000419378 FAM98CQ17RN3 349 aaKnown RBP10.17□□□□□ -0.78
HMGN1-205ENST00000419378 RDH13Q8NBN7 331 aa10.17□□□□□ -0.78
HMGN1-205ENST00000419378 PROCA1Q8NCQ7 364 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-205ENST00000419378 AMOTL2Q9Y2J4 779 aa10.17□□□□□ -0.78
HMGN1-205ENST00000419378 NCOA3Q9Y6Q9 1424 aa10.16□□□□□ -0.78
HMGN1-205ENST00000419378 MSH6P52701 1360 aa10.16□□□□□ -0.78
HMGN1-205ENST00000419378 HSPA1LP34931 641 aa10.16□□□□□ -0.78
HMGN1-205ENST00000419378 SPIRE2Q8WWL2 714 aa10.16□□□□□ -0.78
HMGN1-205ENST00000419378 ANKRD30BQ9BXX2 1392 aa10.15□□□□□ -0.78
HMGN1-205ENST00000419378 DIXDC1Q155Q3 683 aa10.15□□□□□ -0.78
HMGN1-205ENST00000419378 RGL3Q3MIN7 710 aa10.15□□□□□ -0.78
HMGN1-205ENST00000419378 ADGRF5Q8IZF2 1346 aa10.14□□□□□ -0.79
HMGN1-205ENST00000419378 TK2O00142 265 aa10.14□□□□□ -0.79
HMGN1-205ENST00000419378 LSM11P83369 360 aaKnown RBP eCLIP10.14□□□□□ -0.79
HMGN1-205ENST00000419378 NUTM1Q86Y26 1132 aa10.14□□□□□ -0.79
HMGN1-205ENST00000419378 NBPF3Q9H094 633 aa10.14□□□□□ -0.79
HMGN1-205ENST00000419378 MYOM2P54296 1465 aa10.14□□□□□ -0.79
HMGN1-205ENST00000419378 PIK3C2GO75747 1445 aa10.14□□□□□ -0.79
HMGN1-205ENST00000419378 PTCH1Q13635 1447 aa10.14□□□□□ -0.79
HMGN1-205ENST00000419378 PRAG1Q86YV5 1406 aa10.14□□□□□ -0.79
HMGN1-205ENST00000419378 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.13□□□□□ -0.79
HMGN1-205ENST00000419378 ROBO1Q9Y6N7 1651 aa10.13□□□□□ -0.79
HMGN1-205ENST00000419378 BHMG1C9JSJ3 638 aaPredicted RBP10.13□□□□□ -0.79
HMGN1-205ENST00000419378 CLK2P49760 499 aaKnown RBP10.13□□□□□ -0.79
HMGN1-205ENST00000419378 SAMD7Q7Z3H4 446 aa10.13□□□□□ -0.79
HMGN1-205ENST00000419378 LAPTM4BQ86VI4 370 aa10.13□□□□□ -0.79
HMGN1-205ENST00000419378 FAM135BQ49AJ0 1406 aa10.13□□□□□ -0.79
HMGN1-205ENST00000419378 ASXL1Q8IXJ9 1541 aa10.12□□□□□ -0.79
HMGN1-205ENST00000419378 NRXN1Q9ULB1 1477 aa10.12□□□□□ -0.79
HMGN1-205ENST00000419378 SLC10A3P09131 477 aa10.12□□□□□ -0.79
HMGN1-205ENST00000419378 LIMD1Q9UGP4 676 aa10.12□□□□□ -0.79
HMGN1-205ENST00000419378 NALCNQ8IZF0 1738 aa10.12□□□□□ -0.79
HMGN1-205ENST00000419378 DCCP43146 1447 aa10.11□□□□□ -0.79
HMGN1-205ENST00000419378 ADGRL3Q9HAR2 1447 aa10.11□□□□□ -0.79
HMGN1-205ENST00000419378 ADGRD1Q6QNK2 874 aa10.11□□□□□ -0.79
HMGN1-205ENST00000419378 RIC3Q7Z5B4 369 aa10.11□□□□□ -0.79
HMGN1-205ENST00000419378 ROBO2Q9HCK4 1378 aa10.11□□□□□ -0.79
HMGN1-205ENST00000419378 LAMC1P11047 1609 aa10.11□□□□□ -0.79
HMGN1-205ENST00000419378 MOXD2PA6NHM9 499 aa10.1□□□□□ -0.79
HMGN1-205ENST00000419378 GCGRP47871 477 aa10.1□□□□□ -0.79
HMGN1-205ENST00000419378 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.1□□□□□ -0.79
HMGN1-205ENST00000419378 C19orf44Q9H6X5 657 aa10.1□□□□□ -0.79
HMGN1-205ENST00000419378 SLAIN2Q9P270 581 aa10.1□□□□□ -0.79
HMGN1-205ENST00000419378 KNDC1Q76NI1 1749 aa10.1□□□□□ -0.79
HMGN1-205ENST00000419378 TECPR2O15040 1411 aa10.09□□□□□ -0.79
HMGN1-205ENST00000419378 KDM4AO75164 1064 aa10.09□□□□□ -0.79
HMGN1-205ENST00000419378 ATF3P18847 181 aa10.09□□□□□ -0.79
HMGN1-205ENST00000419378 MRPL50Q8N5N7 158 aaKnown RBP10.09□□□□□ -0.79
HMGN1-205ENST00000419378 ZFRQ96KR1 1074 aaKnown RBP10.09□□□□□ -0.79
HMGN1-205ENST00000419378 SPTLC1O15269 473 aa10.08□□□□□ -0.8
HMGN1-205ENST00000419378 RNF40O75150 1001 aa10.08□□□□□ -0.8
HMGN1-205ENST00000419378 NDUFV2P19404 249 aa10.08□□□□□ -0.8
HMGN1-205ENST00000419378 SLC4A3P48751 1232 aa10.08□□□□□ -0.8
HMGN1-205ENST00000419378 ANKRD13DQ6ZTN6 518 aa10.08□□□□□ -0.8
HMGN1-205ENST00000419378 SLF2Q8IX21 1173 aa10.08□□□□□ -0.8
HMGN1-205ENST00000419378 LRPPRCP42704 1394 aaKnown RBP10.08□□□□□ -0.8
HMGN1-205ENST00000419378 MED1Q15648 1581 aaPredicted RBP10.08□□□□□ -0.8
HMGN1-205ENST00000419378 MST1RQ04912 1400 aa10.07□□□□□ -0.8
HMGN1-205ENST00000419378 DHX57Q6P158 1386 aaKnown RBP10.07□□□□□ -0.8
HMGN1-205ENST00000419378 DISP3Q9P2K9 1392 aa10.07□□□□□ -0.8
HMGN1-205ENST00000419378 RSBN1LQ6PCB5 846 aaPredicted RBP10.07□□□□□ -0.8
HMGN1-205ENST00000419378 PHLPP1O60346 1717 aa10.07□□□□□ -0.8
HMGN1-205ENST00000419378 YTHDC2Q9H6S0 1430 aaKnown RBP10.07□□□□□ -0.8
HMGN1-205ENST00000419378 HRO43593 1189 aa10.06□□□□□ -0.8
HMGN1-205ENST00000419378 FLIIQ13045 1269 aa10.06□□□□□ -0.8
HMGN1-205ENST00000419378 CSPP1Q1MSJ5 1256 aa10.06□□□□□ -0.8
HMGN1-205ENST00000419378 TMEM132EQ6IEE7 984 aa10.06□□□□□ -0.8
HMGN1-205ENST00000419378 C14orf93Q9H972 538 aaKnown RBP10.06□□□□□ -0.8
HMGN1-205ENST00000419378 STK26Q9P289 416 aa10.06□□□□□ -0.8
HMGN1-205ENST00000419378 COL16A1Q07092 1604 aaPredicted RBP10.06□□□□□ -0.8
HMGN1-205ENST00000419378 AHDC1Q5TGY3 1603 aaPredicted RBP10.06□□□□□ -0.8
HMGN1-205ENST00000419378 ADGRB1O14514 1584 aa10.05□□□□□ -0.8
HMGN1-205ENST00000419378 CDC42BPGQ6DT37 1551 aa10.05□□□□□ -0.8
HMGN1-205ENST00000419378 ABCC11Q96J66 1382 aa10.05□□□□□ -0.8
HMGN1-205ENST00000419378 USP46P62068 366 aa10.05□□□□□ -0.8
HMGN1-205ENST00000419378 CFAP70Q5T0N1 1121 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms