RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 CAMKK2Q96RR4 588 aa17.93■□□□□ 0.46
TGFBR3-203ENST00000417833 SBF2Q86WG5 1849 aa17.92■□□□□ 0.46
TGFBR3-203ENST00000417833 MEGF6O75095 1541 aa17.92■□□□□ 0.46
TGFBR3-203ENST00000417833 PLEKHG2Q9H7P9 1386 aa17.91■□□□□ 0.46
TGFBR3-203ENST00000417833 TATP17735 454 aaPredicted RBP17.91■□□□□ 0.46
TGFBR3-203ENST00000417833 USHBP1Q8N6Y0 703 aa17.91■□□□□ 0.46
TGFBR3-203ENST00000417833 ZCRB1Q8TBF4 217 aaKnown RBP17.91■□□□□ 0.46
TGFBR3-203ENST00000417833 IGSF1Q8N6C5 1336 aa17.91■□□□□ 0.46
TGFBR3-203ENST00000417833 TRIM37O94972 964 aa17.9■□□□□ 0.46
TGFBR3-203ENST00000417833 IFFO2Q5TF58 517 aa17.9■□□□□ 0.46
TGFBR3-203ENST00000417833 SHANK3Q9BYB0 1731 aa17.89■□□□□ 0.46
TGFBR3-203ENST00000417833 IL13P35225 146 aa17.89■□□□□ 0.45
TGFBR3-203ENST00000417833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.89■□□□□ 0.45
TGFBR3-203ENST00000417833 BCL11BQ9C0K0 894 aaPredicted RBP17.88■□□□□ 0.45
TGFBR3-203ENST00000417833 DDX10Q13206 875 aaKnown RBP17.87■□□□□ 0.45
TGFBR3-203ENST00000417833 UTRNP46939 3433 aa17.86■□□□□ 0.45
TGFBR3-203ENST00000417833 PKD1L3Q7Z443 1732 aa17.86■□□□□ 0.45
TGFBR3-203ENST00000417833 DDX54Q8TDD1 881 aaKnown RBP17.86■□□□□ 0.45
TGFBR3-203ENST00000417833 SPON1Q9HCB6 807 aa17.86■□□□□ 0.45
TGFBR3-203ENST00000417833 APBA3O96018 575 aa17.85■□□□□ 0.45
TGFBR3-203ENST00000417833 PPP2R1AP30153 589 aa17.85■□□□□ 0.45
TGFBR3-203ENST00000417833 NBPF14Q5TI25 921 aa17.85■□□□□ 0.45
TGFBR3-203ENST00000417833 PPP1R1BQ9UD71 204 aaPredicted RBP17.85■□□□□ 0.45
TGFBR3-203ENST00000417833 RREB1Q92766 1687 aa17.84■□□□□ 0.45
TGFBR3-203ENST00000417833 KDRP35968 1356 aa17.84■□□□□ 0.45
TGFBR3-203ENST00000417833 PCDH11XQ9BZA7 1347 aa17.84■□□□□ 0.45
TGFBR3-203ENST00000417833 PCDH11YQ9BZA8 1340 aa17.84■□□□□ 0.45
TGFBR3-203ENST00000417833 PLSCR1O15162 318 aa17.84■□□□□ 0.45
TGFBR3-203ENST00000417833 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
TGFBR3-203ENST00000417833 CNGB1Q14028 1251 aaPredicted RBP17.84■□□□□ 0.45
TGFBR3-203ENST00000417833 SPG7Q9UQ90 795 aa17.84■□□□□ 0.45
TGFBR3-203ENST00000417833 NHSQ6T4R5 1651 aa17.83■□□□□ 0.45
TGFBR3-203ENST00000417833 COL3A1P02461 1466 aaPredicted RBP17.83■□□□□ 0.45
TGFBR3-203ENST00000417833 DIEXFQ68CQ4 756 aaKnown RBP17.83■□□□□ 0.44
TGFBR3-203ENST00000417833 RGPD3A6NKT7 1758 aaPredicted RBP17.83■□□□□ 0.44
TGFBR3-203ENST00000417833 RGPD4Q7Z3J3 1758 aa17.83■□□□□ 0.44
TGFBR3-203ENST00000417833 KCNQ2O43526 872 aa17.82■□□□□ 0.44
TGFBR3-203ENST00000417833 CYP27B1O15528 508 aa17.81■□□□□ 0.44
TGFBR3-203ENST00000417833 NKX1-1Q15270 411 aaPredicted RBP17.81■□□□□ 0.44
TGFBR3-203ENST00000417833 ZNF784Q8NCA9 323 aaPredicted RBP17.81■□□□□ 0.44
TGFBR3-203ENST00000417833 CFAP53Q96M91 514 aa17.81■□□□□ 0.44
TGFBR3-203ENST00000417833 NUP188Q5SRE5 1749 aa17.81■□□□□ 0.44
TGFBR3-203ENST00000417833 RALBP1Q15311 655 aa17.8■□□□□ 0.44
TGFBR3-203ENST00000417833 SULT6B1Q6IMI4 303 aa17.8■□□□□ 0.44
TGFBR3-203ENST00000417833 PTF1AQ7RTS3 328 aa17.8■□□□□ 0.44
TGFBR3-203ENST00000417833 SENP3-EIF4A1A0A087X0R7 540 aa17.79■□□□□ 0.44
TGFBR3-203ENST00000417833 AMOTQ4VCS5 1084 aa17.79■□□□□ 0.44
TGFBR3-203ENST00000417833 AEBP1Q8IUX7 1158 aa17.79■□□□□ 0.44
TGFBR3-203ENST00000417833 PLEKHO1Q53GL0 409 aaPredicted RBP17.78■□□□□ 0.44
TGFBR3-203ENST00000417833 IFNL2Q8IZJ0 200 aa17.78■□□□□ 0.44
TGFBR3-203ENST00000417833 ACSBG1Q96GR2 724 aa17.78■□□□□ 0.44
TGFBR3-203ENST00000417833 DOT1LQ8TEK3 1739 aa17.77■□□□□ 0.44
TGFBR3-203ENST00000417833 PHKG2P15735 406 aa17.76■□□□□ 0.43
TGFBR3-203ENST00000417833 PRIM1P49642 420 aaKnown RBP17.76■□□□□ 0.43
TGFBR3-203ENST00000417833 BTAF1O14981 1849 aa17.76■□□□□ 0.43
TGFBR3-203ENST00000417833 C1QTNF8P60827 252 aa17.75■□□□□ 0.43
TGFBR3-203ENST00000417833 NUDCQ9Y266 331 aa17.75■□□□□ 0.43
TGFBR3-203ENST00000417833 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
TGFBR3-203ENST00000417833 HMOX1P09601 288 aa17.73■□□□□ 0.43
TGFBR3-203ENST00000417833 PROM2Q8N271 834 aa17.73■□□□□ 0.43
TGFBR3-203ENST00000417833 KAT6BQ8WYB5 2073 aa17.73■□□□□ 0.43
TGFBR3-203ENST00000417833 U2SURPO15042 1029 aaKnown RBP17.72■□□□□ 0.43
TGFBR3-203ENST00000417833 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
TGFBR3-203ENST00000417833 CHD4Q14839 1912 aa17.71■□□□□ 0.43
TGFBR3-203ENST00000417833 ITGB4P16144 1822 aa17.71■□□□□ 0.43
TGFBR3-203ENST00000417833 TXNRD1Q16881 649 aa17.71■□□□□ 0.43
TGFBR3-203ENST00000417833 ZNF530Q6P9A1 599 aaPredicted RBP17.71■□□□□ 0.43
TGFBR3-203ENST00000417833 SYTL4Q96C24 671 aaPredicted RBP17.71■□□□□ 0.43
TGFBR3-203ENST00000417833 DCAF5Q96JK2 942 aa17.71■□□□□ 0.43
TGFBR3-203ENST00000417833 MYBBP1AQ9BQG0 1328 aaKnown RBP17.71■□□□□ 0.42
TGFBR3-203ENST00000417833 PRKRIP1Q9H875 184 aaPredicted RBP17.7■□□□□ 0.42
TGFBR3-203ENST00000417833 ERVV-2B6SEH9 535 aa17.69■□□□□ 0.42
TGFBR3-203ENST00000417833 FCHSD2O94868 740 aa17.69■□□□□ 0.42
TGFBR3-203ENST00000417833 AKAP4Q5JQC9 854 aa17.69■□□□□ 0.42
TGFBR3-203ENST00000417833 C1orf141Q5JVX7 400 aa17.69■□□□□ 0.42
TGFBR3-203ENST00000417833 CEP350Q5VT06 3117 aa17.69■□□□□ 0.42
TGFBR3-203ENST00000417833 LY75O60449 1722 aa17.68■□□□□ 0.42
TGFBR3-203ENST00000417833 SLC27A3Q5K4L6 730 aa17.68■□□□□ 0.42
TGFBR3-203ENST00000417833 RSPH6AQ9H0K4 717 aa17.68■□□□□ 0.42
TGFBR3-203ENST00000417833 U2AF1L5P0DN76 240 aaPredicted RBP17.67■□□□□ 0.42
TGFBR3-203ENST00000417833 U2AF1Q01081 240 aaKnown RBP eCLIP17.67■□□□□ 0.42
TGFBR3-203ENST00000417833 MTHFSDQ2M296 383 aaKnown RBP17.67■□□□□ 0.42
TGFBR3-203ENST00000417833 MPRIPQ6WCQ1 1025 aa17.67■□□□□ 0.42
TGFBR3-203ENST00000417833 PIGBQ92521 554 aa17.66■□□□□ 0.42
TGFBR3-203ENST00000417833 KDM6AO15550 1401 aaPredicted RBP17.65■□□□□ 0.42
TGFBR3-203ENST00000417833 SMARCC1Q92922 1105 aaPredicted RBP17.65■□□□□ 0.42
TGFBR3-203ENST00000417833 TMOD3Q9NYL9 352 aa17.65■□□□□ 0.42
TGFBR3-203ENST00000417833 CASZ1Q86V15 1759 aa17.65■□□□□ 0.42
TGFBR3-203ENST00000417833 SCN11AQ9UI33 1791 aa17.65■□□□□ 0.42
TGFBR3-203ENST00000417833 ADAMTS7Q9UKP4 1686 aa17.64■□□□□ 0.42
TGFBR3-203ENST00000417833 HMGB2P26583 209 aaKnown RBP17.64■□□□□ 0.41
TGFBR3-203ENST00000417833 PRKAR2BP31323 418 aa17.64■□□□□ 0.41
TGFBR3-203ENST00000417833 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.41
TGFBR3-203ENST00000417833 LRRC4BQ9NT99 713 aa17.63■□□□□ 0.41
TGFBR3-203ENST00000417833 PAPPAQ13219 1627 aa17.62■□□□□ 0.41
TGFBR3-203ENST00000417833 PHACTR3Q96KR7 559 aa17.62■□□□□ 0.41
TGFBR3-203ENST00000417833 CABP4P57796 275 aa17.61■□□□□ 0.41
TGFBR3-203ENST00000417833 PNNQ9H307 717 aaKnown RBP17.61■□□□□ 0.41
TGFBR3-203ENST00000417833 PALLDQ8WX93 1383 aa17.61■□□□□ 0.41
TGFBR3-203ENST00000417833 GNAT3A8MTJ3 354 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms