RNA–Protein interactions for RNA: ENST00000417640.6

NECAB1-201, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB1, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-201ENST00000417640 CCDC61Q9Y6R9 512 aa22.11■■□□□ 1.13
NECAB1-201ENST00000417640 FYB1O15117 783 aa22.1■■□□□ 1.13
NECAB1-201ENST00000417640 SMARCA5O60264 1052 aaPredicted RBP22.1■■□□□ 1.13
NECAB1-201ENST00000417640 MAP3K11Q16584 847 aa22.1■■□□□ 1.13
NECAB1-201ENST00000417640 ESCO1Q5FWF5 840 aa22.1■■□□□ 1.13
NECAB1-201ENST00000417640 BMP2KLQ5H9B9 411 aa22.1■■□□□ 1.13
NECAB1-201ENST00000417640 CASTP20810 708 aaKnown RBP22.1■■□□□ 1.13
NECAB1-201ENST00000417640 TTC39AQ5SRH9 613 aa22.1■■□□□ 1.13
NECAB1-201ENST00000417640 PIP4K2AP48426 406 aaPredicted RBP22.1■■□□□ 1.13
NECAB1-201ENST00000417640 DISP3Q9P2K9 1392 aa22.1■■□□□ 1.13
NECAB1-201ENST00000417640 NUTM1Q86Y26 1132 aa22.09■■□□□ 1.13
NECAB1-201ENST00000417640 KIF1BPQ96EK5 621 aa22.09■■□□□ 1.13
NECAB1-201ENST00000417640 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.09■■□□□ 1.13
NECAB1-201ENST00000417640 SCAF11Q99590 1463 aaKnown RBP22.08■■□□□ 1.13
NECAB1-201ENST00000417640 DHX29Q7Z478 1369 aaKnown RBP22.08■■□□□ 1.13
NECAB1-201ENST00000417640 RAB11FIP3O75154 756 aa22.08■■□□□ 1.12
NECAB1-201ENST00000417640 TATP17735 454 aaPredicted RBP22.08■■□□□ 1.12
NECAB1-201ENST00000417640 OFD1O75665 1012 aa22.07■■□□□ 1.12
NECAB1-201ENST00000417640 GLRX3O76003 335 aaKnown RBP22.07■■□□□ 1.12
NECAB1-201ENST00000417640 CNKSR2Q8WXI2 1034 aa22.07■■□□□ 1.12
NECAB1-201ENST00000417640 NUDT16Q96DE0 195 aaKnown RBP22.07■■□□□ 1.12
NECAB1-201ENST00000417640 DACH1Q9UI36 760 aa22.07■■□□□ 1.12
NECAB1-201ENST00000417640 MCM10Q7L590 875 aa22.07■■□□□ 1.12
NECAB1-201ENST00000417640 PLB1Q6P1J6 1458 aa22.07■■□□□ 1.12
NECAB1-201ENST00000417640 TXLNAP40222 546 aa22.07■■□□□ 1.12
NECAB1-201ENST00000417640 RRP12Q5JTH9 1297 aaKnown RBP22.07■■□□□ 1.12
NECAB1-201ENST00000417640 CCDC183Q5T5S1 534 aa22.07■■□□□ 1.12
NECAB1-201ENST00000417640 PLEKHH1Q9ULM0 1364 aa22.06■■□□□ 1.12
NECAB1-201ENST00000417640 BRPF1P55201 1214 aaPredicted RBP22.06■■□□□ 1.12
NECAB1-201ENST00000417640 CBFA2T2O43439 604 aa22.06■■□□□ 1.12
NECAB1-201ENST00000417640 DCTN1Q14203 1278 aa22.06■■□□□ 1.12
NECAB1-201ENST00000417640 FILIP1Q7Z7B0 1213 aa22.06■■□□□ 1.12
NECAB1-201ENST00000417640 ADGRF5Q8IZF2 1346 aa22.06■■□□□ 1.12
NECAB1-201ENST00000417640 TRIM22Q8IYM9 498 aa22.06■■□□□ 1.12
NECAB1-201ENST00000417640 GNAT3A8MTJ3 354 aa22.05■■□□□ 1.12
NECAB1-201ENST00000417640 KIF6Q6ZMV9 814 aa22.05■■□□□ 1.12
NECAB1-201ENST00000417640 TBC1D9Q6ZT07 1266 aa22.05■■□□□ 1.12
NECAB1-201ENST00000417640 CCDC83Q8IWF9 413 aa22.05■■□□□ 1.12
NECAB1-201ENST00000417640 MIS18AQ9NYP9 233 aa22.05■■□□□ 1.12
NECAB1-201ENST00000417640 SF3B2Q13435 895 aaKnown RBP22.04■■□□□ 1.12
NECAB1-201ENST00000417640 PPFIBP1Q86W92 1011 aa22.04■■□□□ 1.12
NECAB1-201ENST00000417640 MAGEC2Q9UBF1 373 aaPredicted RBP22.04■■□□□ 1.12
NECAB1-201ENST00000417640 CTNNA3Q9UI47 895 aa22.04■■□□□ 1.12
NECAB1-201ENST00000417640 RAPGEF3O95398 923 aa22.03■■□□□ 1.12
NECAB1-201ENST00000417640 FERMT3Q86UX7 667 aa22.03■■□□□ 1.12
NECAB1-201ENST00000417640 CNNM1Q9NRU3 951 aa22.03■■□□□ 1.12
NECAB1-201ENST00000417640 BTBD11A6QL63 1104 aa22.03■■□□□ 1.12
NECAB1-201ENST00000417640 PROSER2Q86WR7 435 aaPredicted RBP22.03■■□□□ 1.12
NECAB1-201ENST00000417640 NSD2O96028 1365 aa22.03■■□□□ 1.12
NECAB1-201ENST00000417640 EPS15P42566 896 aa22.02■■□□□ 1.12
NECAB1-201ENST00000417640 SH2B1Q9NRF2 756 aaPredicted RBP22.02■■□□□ 1.12
NECAB1-201ENST00000417640 PTPRKQ15262 1439 aa22.02■■□□□ 1.12
NECAB1-201ENST00000417640 PDCL2Q8N4E4 241 aa22.02■■□□□ 1.12
NECAB1-201ENST00000417640 KIF14Q15058 1648 aa22.02■■□□□ 1.12
NECAB1-201ENST00000417640 MYL6BP14649 208 aa22.02■■□□□ 1.12
NECAB1-201ENST00000417640 SCAND2PQ9GZW5 306 aaPredicted RBP22.02■■□□□ 1.12
NECAB1-201ENST00000417640 LEKR1Q6ZMV7 388 aa22.02■■□□□ 1.12
NECAB1-201ENST00000417640 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
NECAB1-201ENST00000417640 PRPF40BQ6NWY9 871 aaKnown RBP22.01■■□□□ 1.11
NECAB1-201ENST00000417640 CDKL5O76039 1030 aa22.01■■□□□ 1.11
NECAB1-201ENST00000417640 PATL2C9JE40 543 aaKnown RBP22.01■■□□□ 1.11
NECAB1-201ENST00000417640 BAG4O95429 457 aaKnown RBP22.01■■□□□ 1.11
NECAB1-201ENST00000417640 HDAC1Q13547 482 aaPredicted RBP22.01■■□□□ 1.11
NECAB1-201ENST00000417640 IL16Q14005 1332 aa22■■□□□ 1.11
NECAB1-201ENST00000417640 NACAP1Q9BZK3 213 aa22■■□□□ 1.11
NECAB1-201ENST00000417640 XPCQ01831 940 aaPredicted RBP22■■□□□ 1.11
NECAB1-201ENST00000417640 CAMK4Q16566 473 aa22■■□□□ 1.11
NECAB1-201ENST00000417640 ZSCAN25Q6NSZ9 544 aa22■■□□□ 1.11
NECAB1-201ENST00000417640 ZNHIT6Q9NWK9 470 aaKnown RBP22■■□□□ 1.11
NECAB1-201ENST00000417640 SMTNL1A8MU46 457 aa22■■□□□ 1.11
NECAB1-201ENST00000417640 CABP4P57796 275 aa22■■□□□ 1.11
NECAB1-201ENST00000417640 KLHL40Q2TBA0 621 aa22■■□□□ 1.11
NECAB1-201ENST00000417640 SLC3A2P08195 630 aaKnown RBP21.99■■□□□ 1.11
NECAB1-201ENST00000417640 DDX11Q96FC9 970 aa21.99■■□□□ 1.11
NECAB1-201ENST00000417640 MTMR7Q9Y216 660 aa21.99■■□□□ 1.11
NECAB1-201ENST00000417640 RALGAPBQ86X10 1494 aa21.99■■□□□ 1.11
NECAB1-201ENST00000417640 FKBP4Q02790 459 aaKnown RBP eCLIP21.99■■□□□ 1.11
NECAB1-201ENST00000417640 THEMISQ8N1K5 641 aaPredicted RBP21.99■■□□□ 1.11
NECAB1-201ENST00000417640 LIMCH1Q9UPQ0 1083 aa21.99■■□□□ 1.11
NECAB1-201ENST00000417640 CEP126Q9P2H0 1117 aa21.98■■□□□ 1.11
NECAB1-201ENST00000417640 SPG7Q9UQ90 795 aa21.98■■□□□ 1.11
NECAB1-201ENST00000417640 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
NECAB1-201ENST00000417640 CCDC69A6NI79 296 aa21.98■■□□□ 1.11
NECAB1-201ENST00000417640 HMGB2P26583 209 aaKnown RBP21.98■■□□□ 1.11
NECAB1-201ENST00000417640 CCDC57Q2TAC2 916 aa21.98■■□□□ 1.11
NECAB1-201ENST00000417640 EMILIN1Q9Y6C2 1016 aa21.98■■□□□ 1.11
NECAB1-201ENST00000417640 PTPRCP08575 1304 aa21.98■■□□□ 1.11
NECAB1-201ENST00000417640 C8orf34Q49A92 452 aa21.98■■□□□ 1.11
NECAB1-201ENST00000417640 FAM177A1Q8N128 213 aaPredicted RBP21.98■■□□□ 1.11
NECAB1-201ENST00000417640 PCDHB15Q9Y5E8 787 aa21.98■■□□□ 1.11
NECAB1-201ENST00000417640 WAPLQ7Z5K2 1190 aa21.97■■□□□ 1.11
NECAB1-201ENST00000417640 PARD3Q8TEW0 1356 aa21.97■■□□□ 1.11
NECAB1-201ENST00000417640 H0YHG0 523 aa21.97■■□□□ 1.11
NECAB1-201ENST00000417640 ERLIN1O75477 346 aa21.97■■□□□ 1.11
NECAB1-201ENST00000417640 NME9Q86XW9 330 aa21.97■■□□□ 1.11
NECAB1-201ENST00000417640 F6X3S4 739 aa21.97■■□□□ 1.11
NECAB1-201ENST00000417640 KIF2AO00139 706 aaPredicted RBP21.97■■□□□ 1.11
NECAB1-201ENST00000417640 MCM5P33992 734 aa21.97■■□□□ 1.11
NECAB1-201ENST00000417640 FAM135AQ9P2D6 1515 aa21.97■■□□□ 1.11
NECAB1-201ENST00000417640 SLC26A8Q96RN1 970 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms